RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 BCANQ96GW7 911 aa26.98■■□□□ 1.91
MUC1-224ENST00000611577 SLC52A1Q9NWF4 448 aa26.98■■□□□ 1.91
MUC1-224ENST00000611577 ROBO1Q9Y6N7 1651 aa26.98■■□□□ 1.91
MUC1-224ENST00000611577 RPRD2Q5VT52 1461 aaKnown RBP26.95■■□□□ 1.91
MUC1-224ENST00000611577 ANKRD50Q9ULJ7 1429 aa26.94■■□□□ 1.9
MUC1-224ENST00000611577 MSH6P52701 1360 aa26.92■■□□□ 1.9
MUC1-224ENST00000611577 ZFYVE9O95405 1425 aa26.9■■□□□ 1.9
MUC1-224ENST00000611577 PLEKHG1Q9ULL1 1385 aa26.89■■□□□ 1.9
MUC1-224ENST00000611577 PPP1R15AO75807 674 aaPredicted RBP26.89■■□□□ 1.9
MUC1-224ENST00000611577 RIMS2Q9UQ26 1411 aa26.88■■□□□ 1.89
MUC1-224ENST00000611577 GCC2Q8IWJ2 1684 aa26.88■■□□□ 1.89
MUC1-224ENST00000611577 MYO5BQ9ULV0 1848 aa26.87■■□□□ 1.89
MUC1-224ENST00000611577 POTEAQ6S8J7 498 aa26.85■■□□□ 1.89
MUC1-224ENST00000611577 TMEM131LA2VDJ0 1609 aa26.84■■□□□ 1.89
MUC1-224ENST00000611577 HDGFP51858 240 aaKnown RBP26.83■■□□□ 1.89
MUC1-224ENST00000611577 SLAIN2Q9P270 581 aa26.83■■□□□ 1.89
MUC1-224ENST00000611577 PHLPP1O60346 1717 aa26.82■■□□□ 1.88
MUC1-224ENST00000611577 CHD2O14647 1828 aaKnown RBP26.82■■□□□ 1.88
MUC1-224ENST00000611577 UNC13BO14795 1591 aa26.82■■□□□ 1.88
MUC1-224ENST00000611577 CHGAP10645 457 aaKnown RBP26.81■■□□□ 1.88
MUC1-224ENST00000611577 JCADQ9P266 1359 aa26.78■■□□□ 1.88
MUC1-224ENST00000611577 ITGAEP38570 1179 aa26.77■■□□□ 1.88
MUC1-224ENST00000611577 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.77■■□□□ 1.88
MUC1-224ENST00000611577 TBX22Q9Y458 520 aa26.77■■□□□ 1.88
MUC1-224ENST00000611577 RRBP1Q9P2E9 1410 aaKnown RBP26.76■■□□□ 1.87
MUC1-224ENST00000611577 C14orf37Q86TY3 774 aa26.76■■□□□ 1.87
MUC1-224ENST00000611577 NUTM2DQ5VT03 806 aaPredicted RBP26.75■■□□□ 1.87
MUC1-224ENST00000611577 E9PCH4 1651 aa26.75■■□□□ 1.87
MUC1-224ENST00000611577 ADAMTS13Q76LX8 1427 aa26.73■■□□□ 1.87
MUC1-224ENST00000611577 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
MUC1-224ENST00000611577 COL16A1Q07092 1604 aaPredicted RBP26.73■■□□□ 1.87
MUC1-224ENST00000611577 DIP2AQ14689 1571 aa26.73■■□□□ 1.87
MUC1-224ENST00000611577 IQGAP3Q86VI3 1631 aa26.71■■□□□ 1.87
MUC1-224ENST00000611577 ROCK1Q13464 1354 aa26.7■■□□□ 1.86
MUC1-224ENST00000611577 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
MUC1-224ENST00000611577 SETD1AO15047 1707 aaKnown RBP26.68■■□□□ 1.86
MUC1-224ENST00000611577 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.66■■□□□ 1.86
MUC1-224ENST00000611577 CADPS2Q86UW7 1296 aa26.66■■□□□ 1.86
MUC1-224ENST00000611577 TRPM2O94759 1503 aa26.65■■□□□ 1.86
MUC1-224ENST00000611577 ATF3P18847 181 aa26.65■■□□□ 1.86
MUC1-224ENST00000611577 C19orf44Q9H6X5 657 aa26.65■■□□□ 1.86
MUC1-224ENST00000611577 NUP155O75694 1391 aa26.65■■□□□ 1.86
MUC1-224ENST00000611577 LRP6O75581 1613 aa26.65■■□□□ 1.86
MUC1-224ENST00000611577 AHDC1Q5TGY3 1603 aaPredicted RBP26.64■■□□□ 1.85
MUC1-224ENST00000611577 SPATA31A6Q5VVP1 1343 aa26.64■■□□□ 1.85
MUC1-224ENST00000611577 MEX3CQ5U5Q3 659 aaKnown RBP26.62■■□□□ 1.85
MUC1-224ENST00000611577 AMOTL2Q9Y2J4 779 aa26.61■■□□□ 1.85
MUC1-224ENST00000611577 PTPRUQ92729 1446 aa26.6■■□□□ 1.85
MUC1-224ENST00000611577 SHPRHQ149N8 1683 aa26.58■■□□□ 1.85
MUC1-224ENST00000611577 ZNF772Q68DY9 489 aaPredicted RBP26.55■■□□□ 1.84
MUC1-224ENST00000611577 BRINP3Q76B58 766 aa26.55■■□□□ 1.84
MUC1-224ENST00000611577 DCCP43146 1447 aa26.54■■□□□ 1.84
MUC1-224ENST00000611577 NRXN3Q9Y4C0 1643 aa26.54■■□□□ 1.84
MUC1-224ENST00000611577 XRN1Q8IZH2 1706 aaKnown RBP26.53■■□□□ 1.84
MUC1-224ENST00000611577 SETBP1Q9Y6X0 1596 aa26.53■■□□□ 1.84
MUC1-224ENST00000611577 SPHKAPQ2M3C7 1700 aa26.52■■□□□ 1.84
MUC1-224ENST00000611577 ZNF326Q5BKZ1 582 aaKnown RBP26.51■■□□□ 1.83
MUC1-224ENST00000611577 ASXL1Q8IXJ9 1541 aa26.5■■□□□ 1.83
MUC1-224ENST00000611577 TRIM52Q96A61 297 aa26.5■■□□□ 1.83
MUC1-224ENST00000611577 NUTM2BA6NNL0 878 aaPredicted RBP26.48■■□□□ 1.83
MUC1-224ENST00000611577 NUTM2EB1AL46 878 aaPredicted RBP26.48■■□□□ 1.83
MUC1-224ENST00000611577 NUTM2AQ8IVF1 878 aaPredicted RBP26.48■■□□□ 1.83
MUC1-224ENST00000611577 MST1RQ04912 1400 aa26.48■■□□□ 1.83
MUC1-224ENST00000611577 METP08581 1390 aa26.46■■□□□ 1.83
MUC1-224ENST00000611577 SETD5Q9C0A6 1442 aa26.43■■□□□ 1.82
MUC1-224ENST00000611577 NHSL1Q5SYE7 1610 aa26.43■■□□□ 1.82
MUC1-224ENST00000611577 RXRBP28702 533 aa26.42■■□□□ 1.82
MUC1-224ENST00000611577 UPF1Q92900 1129 aaKnown RBP eCLIP26.42■■□□□ 1.82
MUC1-224ENST00000611577 ADGRL3Q9HAR2 1447 aa26.41■■□□□ 1.82
MUC1-224ENST00000611577 CLTCL1P53675 1640 aa26.41■■□□□ 1.82
MUC1-224ENST00000611577 NEXMIFQ5QGS0 1516 aa26.4■■□□□ 1.82
MUC1-224ENST00000611577 AFF2P51816 1311 aa26.39■■□□□ 1.82
MUC1-224ENST00000611577 NALCNQ8IZF0 1738 aa26.37■■□□□ 1.81
MUC1-224ENST00000611577 LRRC59Q96AG4 307 aaKnown RBP26.37■■□□□ 1.81
MUC1-224ENST00000611577 HFM1A2PYH4 1435 aa26.37■■□□□ 1.81
MUC1-224ENST00000611577 NAIPQ13075 1403 aa26.37■■□□□ 1.81
MUC1-224ENST00000611577 CDK12Q9NYV4 1490 aaPredicted RBP26.36■■□□□ 1.81
MUC1-224ENST00000611577 DDX17Q92841 729 aaKnown RBP26.36■■□□□ 1.81
MUC1-224ENST00000611577 PNPLA6Q8IY17 1366 aa26.33■■□□□ 1.81
MUC1-224ENST00000611577 C8orf37Q96NL8 207 aa26.32■■□□□ 1.8
MUC1-224ENST00000611577 KIF1BO60333 1816 aa26.31■■□□□ 1.8
MUC1-224ENST00000611577 C1orf167Q5SNV9 1468 aa26.3■■□□□ 1.8
MUC1-224ENST00000611577 PTCH1Q13635 1447 aa26.29■■□□□ 1.8
MUC1-224ENST00000611577 RGS12O14924 1447 aa26.27■■□□□ 1.8
MUC1-224ENST00000611577 ROBO2Q9HCK4 1378 aa26.25■■□□□ 1.79
MUC1-224ENST00000611577 RBM6P78332 1123 aaKnown RBP26.24■■□□□ 1.79
MUC1-224ENST00000611577 QTRT2Q9H974 415 aaKnown RBP26.24■■□□□ 1.79
MUC1-224ENST00000611577 VGFO15240 615 aaPredicted RBP26.23■■□□□ 1.79
MUC1-224ENST00000611577 ADAMTS2O95450 1211 aa26.23■■□□□ 1.79
MUC1-224ENST00000611577 LAMC1P11047 1609 aa26.22■■□□□ 1.79
MUC1-224ENST00000611577 NGLY1Q96IV0 654 aa26.21■■□□□ 1.79
MUC1-224ENST00000611577 ORAI2Q96SN7 254 aa26.21■■□□□ 1.79
MUC1-224ENST00000611577 PRAG1Q86YV5 1406 aa26.19■■□□□ 1.78
MUC1-224ENST00000611577 SOS2Q07890 1332 aaPredicted RBP26.18■■□□□ 1.78
MUC1-224ENST00000611577 RPGRIP1LQ68CZ1 1315 aa26.17■■□□□ 1.78
MUC1-224ENST00000611577 SLC4A1APQ9BWU0 796 aaKnown RBP26.14■■□□□ 1.78
MUC1-224ENST00000611577 PPLO60437 1756 aa26.14■■□□□ 1.78
MUC1-224ENST00000611577 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.77
MUC1-224ENST00000611577 USP21Q9UK80 565 aa26.12■■□□□ 1.77
MUC1-224ENST00000611577 RAB3GAP2Q9H2M9 1393 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms