RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
PRKN-208ENST00000610470 PPP1R15AO75807 674 aaPredicted RBP26.31■■□□□ 1.8
PRKN-208ENST00000610470 KCNA6P17658 529 aa26.3■■□□□ 1.8
PRKN-208ENST00000610470 HSPA1LP34931 641 aa26.3■■□□□ 1.8
PRKN-208ENST00000610470 MYO5BQ9ULV0 1848 aa26.3■■□□□ 1.8
PRKN-208ENST00000610470 ALKQ9UM73 1620 aa26.29■■□□□ 1.8
PRKN-208ENST00000610470 PLEKHG1Q9ULL1 1385 aa26.29■■□□□ 1.8
PRKN-208ENST00000610470 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.28■■□□□ 1.8
PRKN-208ENST00000610470 NAIPQ13075 1403 aa26.26■■□□□ 1.79
PRKN-208ENST00000610470 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
PRKN-208ENST00000610470 XIRP1Q702N8 1843 aaKnown RBP26.21■■□□□ 1.79
PRKN-208ENST00000610470 NWD1Q149M9 1564 aa26.21■■□□□ 1.79
PRKN-208ENST00000610470 PROSER2Q86WR7 435 aaPredicted RBP26.21■■□□□ 1.79
PRKN-208ENST00000610470 NKTRP30414 1462 aaKnown RBP26.21■■□□□ 1.79
PRKN-208ENST00000610470 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
PRKN-208ENST00000610470 SPHKAPQ2M3C7 1700 aa26.19■■□□□ 1.78
PRKN-208ENST00000610470 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
PRKN-208ENST00000610470 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
PRKN-208ENST00000610470 NUTM2DQ5VT03 806 aaPredicted RBP26.17■■□□□ 1.78
PRKN-208ENST00000610470 TRIM52Q96A61 297 aa26.14■■□□□ 1.78
PRKN-208ENST00000610470 DIP2AQ14689 1571 aa26.13■■□□□ 1.77
PRKN-208ENST00000610470 ILDR2Q71H61 639 aa26.13■■□□□ 1.77
PRKN-208ENST00000610470 CHD2O14647 1828 aaKnown RBP26.13■■□□□ 1.77
PRKN-208ENST00000610470 ADAMTS13Q76LX8 1427 aa26.13■■□□□ 1.77
PRKN-208ENST00000610470 RBM33Q96EV2 1170 aaKnown RBP26.12■■□□□ 1.77
PRKN-208ENST00000610470 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
PRKN-208ENST00000610470 MSH6P52701 1360 aa26.1■■□□□ 1.77
PRKN-208ENST00000610470 PIK3R4Q99570 1358 aa26.1■■□□□ 1.77
PRKN-208ENST00000610470 TRPM2O94759 1503 aa26.1■■□□□ 1.77
PRKN-208ENST00000610470 FAM135BQ49AJ0 1406 aa26.09■■□□□ 1.77
PRKN-208ENST00000610470 MED1Q15648 1581 aaPredicted RBP26.07■■□□□ 1.76
PRKN-208ENST00000610470 CLTCL1P53675 1640 aa26.06■■□□□ 1.76
PRKN-208ENST00000610470 SLC4A1APQ9BWU0 796 aaKnown RBP26.06■■□□□ 1.76
PRKN-208ENST00000610470 NCOA3Q9Y6Q9 1424 aa26.05■■□□□ 1.76
PRKN-208ENST00000610470 SETBP1Q9Y6X0 1596 aa26.02■■□□□ 1.76
PRKN-208ENST00000610470 KIF1BO60333 1816 aa26■■□□□ 1.75
PRKN-208ENST00000610470 C14orf37Q86TY3 774 aa26■■□□□ 1.75
PRKN-208ENST00000610470 AMOTL2Q9Y2J4 779 aa26■■□□□ 1.75
PRKN-208ENST00000610470 NEXMIFQ5QGS0 1516 aa25.98■■□□□ 1.75
PRKN-208ENST00000610470 SOCS7O14512 581 aa25.98■■□□□ 1.75
PRKN-208ENST00000610470 SLAIN2Q9P270 581 aa25.98■■□□□ 1.75
PRKN-208ENST00000610470 ROBO1Q9Y6N7 1651 aa25.98■■□□□ 1.75
PRKN-208ENST00000610470 NRXN3Q9Y4C0 1643 aa25.98■■□□□ 1.75
PRKN-208ENST00000610470 PTPRUQ92729 1446 aa25.97■■□□□ 1.75
PRKN-208ENST00000610470 PHF23Q9BUL5 403 aaPredicted RBP25.95■■□□□ 1.74
PRKN-208ENST00000610470 C19orf44Q9H6X5 657 aa25.94■■□□□ 1.74
PRKN-208ENST00000610470 CADPS2Q86UW7 1296 aa25.93■■□□□ 1.74
PRKN-208ENST00000610470 ATF3P18847 181 aa25.92■■□□□ 1.74
PRKN-208ENST00000610470 RPGRIP1LQ68CZ1 1315 aa25.91■■□□□ 1.74
PRKN-208ENST00000610470 VGFO15240 615 aaPredicted RBP25.91■■□□□ 1.74
PRKN-208ENST00000610470 METP08581 1390 aa25.91■■□□□ 1.74
PRKN-208ENST00000610470 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
PRKN-208ENST00000610470 XRN1Q8IZH2 1706 aaKnown RBP25.9■■□□□ 1.74
PRKN-208ENST00000610470 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.88■■□□□ 1.73
PRKN-208ENST00000610470 FOXD1Q16676 465 aa25.88■■□□□ 1.73
PRKN-208ENST00000610470 MPHOSPH9Q99550 1183 aa25.88■■□□□ 1.73
PRKN-208ENST00000610470 CCDC144AA2RUR9 1427 aa25.85■■□□□ 1.73
PRKN-208ENST00000610470 DCCP43146 1447 aa25.84■■□□□ 1.73
PRKN-208ENST00000610470 PHLPP1O60346 1717 aa25.83■■□□□ 1.73
PRKN-208ENST00000610470 SETD5Q9C0A6 1442 aa25.83■■□□□ 1.73
PRKN-208ENST00000610470 PPLO60437 1756 aa25.8■■□□□ 1.72
PRKN-208ENST00000610470 JCADQ9P266 1359 aa25.79■■□□□ 1.72
PRKN-208ENST00000610470 ADGRL3Q9HAR2 1447 aa25.77■■□□□ 1.72
PRKN-208ENST00000610470 PTCH1Q13635 1447 aa25.76■■□□□ 1.71
PRKN-208ENST00000610470 SETD1AO15047 1707 aaKnown RBP25.76■■□□□ 1.71
PRKN-208ENST00000610470 COL16A1Q07092 1604 aaPredicted RBP25.75■■□□□ 1.71
PRKN-208ENST00000610470 AHDC1Q5TGY3 1603 aaPredicted RBP25.75■■□□□ 1.71
PRKN-208ENST00000610470 SPATA31E1Q6ZUB1 1445 aa25.75■■□□□ 1.71
PRKN-208ENST00000610470 RGL3Q3MIN7 710 aa25.75■■□□□ 1.71
PRKN-208ENST00000610470 BRINP3Q76B58 766 aa25.74■■□□□ 1.71
PRKN-208ENST00000610470 MST1RQ04912 1400 aa25.73■■□□□ 1.71
PRKN-208ENST00000610470 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
PRKN-208ENST00000610470 RAB3GAP2Q9H2M9 1393 aa25.72■■□□□ 1.71
PRKN-208ENST00000610470 PRAG1Q86YV5 1406 aa25.71■■□□□ 1.71
PRKN-208ENST00000610470 RGS17Q9UGC6 210 aaPredicted RBP25.71■■□□□ 1.71
PRKN-208ENST00000610470 ROBO2Q9HCK4 1378 aa25.7■■□□□ 1.71
PRKN-208ENST00000610470 ADGRF5Q8IZF2 1346 aa25.7■■□□□ 1.71
PRKN-208ENST00000610470 ASXL1Q8IXJ9 1541 aa25.69■■□□□ 1.7
PRKN-208ENST00000610470 NALCNQ8IZF0 1738 aa25.69■■□□□ 1.7
PRKN-208ENST00000610470 SPATA31A6Q5VVP1 1343 aa25.67■■□□□ 1.7
PRKN-208ENST00000610470 IFT172Q9UG01 1749 aa25.66■■□□□ 1.7
PRKN-208ENST00000610470 SHPRHQ149N8 1683 aa25.62■■□□□ 1.69
PRKN-208ENST00000610470 PIK3C2GO75747 1445 aa25.62■■□□□ 1.69
PRKN-208ENST00000610470 C1orf167Q5SNV9 1468 aa25.61■■□□□ 1.69
PRKN-208ENST00000610470 NHSL1Q5SYE7 1610 aa25.61■■□□□ 1.69
PRKN-208ENST00000610470 LRPPRCP42704 1394 aaKnown RBP25.58■■□□□ 1.69
PRKN-208ENST00000610470 HRCP23327 699 aa25.58■■□□□ 1.69
PRKN-208ENST00000610470 MEX3CQ5U5Q3 659 aaKnown RBP25.58■■□□□ 1.69
PRKN-208ENST00000610470 POTEAQ6S8J7 498 aa25.58■■□□□ 1.69
PRKN-208ENST00000610470 LRRC59Q96AG4 307 aaKnown RBP25.58■■□□□ 1.69
PRKN-208ENST00000610470 STK26Q9P289 416 aa25.58■■□□□ 1.69
PRKN-208ENST00000610470 TECPR2O15040 1411 aa25.57■■□□□ 1.68
PRKN-208ENST00000610470 LRP6O75581 1613 aa25.57■■□□□ 1.68
PRKN-208ENST00000610470 ABCC11Q96J66 1382 aa25.56■■□□□ 1.68
PRKN-208ENST00000610470 TMEM132EQ6IEE7 984 aa25.55■■□□□ 1.68
PRKN-208ENST00000610470 MYOM2P54296 1465 aa25.54■■□□□ 1.68
PRKN-208ENST00000610470 DDX17Q92841 729 aaKnown RBP25.54■■□□□ 1.68
PRKN-208ENST00000610470 C14orf93Q9H972 538 aaKnown RBP25.53■■□□□ 1.68
PRKN-208ENST00000610470 NRXN1Q9ULB1 1477 aa25.53■■□□□ 1.68
PRKN-208ENST00000610470 CDC42BPGQ6DT37 1551 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms