RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TET3O43151 1660 aa27.03■■□□□ 1.92
CHMP4A-211ENST00000609024 ADGRB3O60242 1522 aa27.03■■□□□ 1.92
CHMP4A-211ENST00000609024 SLAIN2Q9P270 581 aa27.02■■□□□ 1.92
CHMP4A-211ENST00000609024 NOS1P29475 1434 aa26.99■■□□□ 1.91
CHMP4A-211ENST00000609024 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
CHMP4A-211ENST00000609024 NWD1Q149M9 1564 aa26.97■■□□□ 1.91
CHMP4A-211ENST00000609024 JCADQ9P266 1359 aa26.97■■□□□ 1.91
CHMP4A-211ENST00000609024 PHLPP1O60346 1717 aa26.96■■□□□ 1.91
CHMP4A-211ENST00000609024 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
CHMP4A-211ENST00000609024 FAM50AQ14320 339 aaKnown RBP26.93■■□□□ 1.9
CHMP4A-211ENST00000609024 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
CHMP4A-211ENST00000609024 MEX3CQ5U5Q3 659 aaKnown RBP26.92■■□□□ 1.9
CHMP4A-211ENST00000609024 PLEKHG1Q9ULL1 1385 aa26.92■■□□□ 1.9
CHMP4A-211ENST00000609024 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
CHMP4A-211ENST00000609024 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.9■■□□□ 1.9
CHMP4A-211ENST00000609024 ANKRD50Q9ULJ7 1429 aa26.89■■□□□ 1.89
CHMP4A-211ENST00000609024 ADGRL2O95490 1459 aa26.87■■□□□ 1.89
CHMP4A-211ENST00000609024 CHD2O14647 1828 aaKnown RBP26.87■■□□□ 1.89
CHMP4A-211ENST00000609024 ZFYVE9O95405 1425 aa26.86■■□□□ 1.89
CHMP4A-211ENST00000609024 ATF3P18847 181 aa26.86■■□□□ 1.89
CHMP4A-211ENST00000609024 TBX22Q9Y458 520 aa26.86■■□□□ 1.89
CHMP4A-211ENST00000609024 GCC2Q8IWJ2 1684 aa26.85■■□□□ 1.89
CHMP4A-211ENST00000609024 CADPS2Q86UW7 1296 aa26.84■■□□□ 1.89
CHMP4A-211ENST00000609024 SPATA31A6Q5VVP1 1343 aa26.84■■□□□ 1.89
CHMP4A-211ENST00000609024 MYO5BQ9ULV0 1848 aa26.83■■□□□ 1.89
CHMP4A-211ENST00000609024 NCOA3Q9Y6Q9 1424 aa26.83■■□□□ 1.89
CHMP4A-211ENST00000609024 ZNF772Q68DY9 489 aaPredicted RBP26.83■■□□□ 1.89
CHMP4A-211ENST00000609024 SETD1AO15047 1707 aaKnown RBP26.82■■□□□ 1.88
CHMP4A-211ENST00000609024 NUTM2DQ5VT03 806 aaPredicted RBP26.8■■□□□ 1.88
CHMP4A-211ENST00000609024 C19orf44Q9H6X5 657 aa26.8■■□□□ 1.88
CHMP4A-211ENST00000609024 TMEM131LA2VDJ0 1609 aa26.79■■□□□ 1.88
CHMP4A-211ENST00000609024 COL16A1Q07092 1604 aaPredicted RBP26.79■■□□□ 1.88
CHMP4A-211ENST00000609024 TRIM52Q96A61 297 aa26.77■■□□□ 1.88
CHMP4A-211ENST00000609024 PIK3R4Q99570 1358 aa26.75■■□□□ 1.87
CHMP4A-211ENST00000609024 DIP2AQ14689 1571 aa26.75■■□□□ 1.87
CHMP4A-211ENST00000609024 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.72■■□□□ 1.87
CHMP4A-211ENST00000609024 LRP6O75581 1613 aa26.71■■□□□ 1.87
CHMP4A-211ENST00000609024 ADAMTS13Q76LX8 1427 aa26.71■■□□□ 1.87
CHMP4A-211ENST00000609024 AHDC1Q5TGY3 1603 aaPredicted RBP26.7■■□□□ 1.86
CHMP4A-211ENST00000609024 NUTM2BA6NNL0 878 aaPredicted RBP26.7■■□□□ 1.86
CHMP4A-211ENST00000609024 NUTM2EB1AL46 878 aaPredicted RBP26.7■■□□□ 1.86
CHMP4A-211ENST00000609024 NUTM2AQ8IVF1 878 aaPredicted RBP26.7■■□□□ 1.86
CHMP4A-211ENST00000609024 AMOTL2Q9Y2J4 779 aa26.7■■□□□ 1.86
CHMP4A-211ENST00000609024 TRPM2O94759 1503 aa26.7■■□□□ 1.86
CHMP4A-211ENST00000609024 UNC13BO14795 1591 aa26.69■■□□□ 1.86
CHMP4A-211ENST00000609024 RXRBP28702 533 aa26.69■■□□□ 1.86
CHMP4A-211ENST00000609024 SHPRHQ149N8 1683 aa26.68■■□□□ 1.86
CHMP4A-211ENST00000609024 UPF1Q92900 1129 aaKnown RBP eCLIP26.67■■□□□ 1.86
CHMP4A-211ENST00000609024 E9PCH4 1651 aa26.66■■□□□ 1.86
CHMP4A-211ENST00000609024 BRINP3Q76B58 766 aa26.65■■□□□ 1.86
CHMP4A-211ENST00000609024 NUP155O75694 1391 aa26.63■■□□□ 1.85
CHMP4A-211ENST00000609024 ZNF326Q5BKZ1 582 aaKnown RBP26.61■■□□□ 1.85
CHMP4A-211ENST00000609024 DCCP43146 1447 aa26.6■■□□□ 1.85
CHMP4A-211ENST00000609024 IQGAP3Q86VI3 1631 aa26.6■■□□□ 1.85
CHMP4A-211ENST00000609024 ROCK1Q13464 1354 aa26.59■■□□□ 1.85
CHMP4A-211ENST00000609024 LRRC59Q96AG4 307 aaKnown RBP26.58■■□□□ 1.85
CHMP4A-211ENST00000609024 ITGAEP38570 1179 aa26.57■■□□□ 1.84
CHMP4A-211ENST00000609024 AFF2P51816 1311 aa26.57■■□□□ 1.84
CHMP4A-211ENST00000609024 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
CHMP4A-211ENST00000609024 ASXL1Q8IXJ9 1541 aa26.56■■□□□ 1.84
CHMP4A-211ENST00000609024 CDK12Q9NYV4 1490 aaPredicted RBP26.54■■□□□ 1.84
CHMP4A-211ENST00000609024 C8orf37Q96NL8 207 aa26.53■■□□□ 1.84
CHMP4A-211ENST00000609024 SETD5Q9C0A6 1442 aa26.52■■□□□ 1.84
CHMP4A-211ENST00000609024 MST1RQ04912 1400 aa26.5■■□□□ 1.83
CHMP4A-211ENST00000609024 SETBP1Q9Y6X0 1596 aa26.49■■□□□ 1.83
CHMP4A-211ENST00000609024 XRN1Q8IZH2 1706 aaKnown RBP26.48■■□□□ 1.83
CHMP4A-211ENST00000609024 QTRT2Q9H974 415 aaKnown RBP26.48■■□□□ 1.83
CHMP4A-211ENST00000609024 RBM6P78332 1123 aaKnown RBP26.47■■□□□ 1.83
CHMP4A-211ENST00000609024 NHSL1Q5SYE7 1610 aa26.47■■□□□ 1.83
CHMP4A-211ENST00000609024 NGLY1Q96IV0 654 aa26.45■■□□□ 1.82
CHMP4A-211ENST00000609024 SPHKAPQ2M3C7 1700 aa26.45■■□□□ 1.82
CHMP4A-211ENST00000609024 METP08581 1390 aa26.45■■□□□ 1.82
CHMP4A-211ENST00000609024 NRXN3Q9Y4C0 1643 aa26.44■■□□□ 1.82
CHMP4A-211ENST00000609024 DDX17Q92841 729 aaKnown RBP26.44■■□□□ 1.82
CHMP4A-211ENST00000609024 ADGRL3Q9HAR2 1447 aa26.44■■□□□ 1.82
CHMP4A-211ENST00000609024 PNPLA6Q8IY17 1366 aa26.42■■□□□ 1.82
CHMP4A-211ENST00000609024 ADAMTS2O95450 1211 aa26.41■■□□□ 1.82
CHMP4A-211ENST00000609024 RGS12O14924 1447 aa26.39■■□□□ 1.81
CHMP4A-211ENST00000609024 FOXD1Q16676 465 aa26.37■■□□□ 1.81
CHMP4A-211ENST00000609024 NALCNQ8IZF0 1738 aa26.35■■□□□ 1.81
CHMP4A-211ENST00000609024 C1orf167Q5SNV9 1468 aa26.34■■□□□ 1.81
CHMP4A-211ENST00000609024 USP21Q9UK80 565 aa26.33■■□□□ 1.81
CHMP4A-211ENST00000609024 ATAD2Q6PL18 1390 aa26.33■■□□□ 1.8
CHMP4A-211ENST00000609024 VGFO15240 615 aaPredicted RBP26.32■■□□□ 1.8
CHMP4A-211ENST00000609024 NEXMIFQ5QGS0 1516 aa26.32■■□□□ 1.8
CHMP4A-211ENST00000609024 KIF1BO60333 1816 aa26.31■■□□□ 1.8
CHMP4A-211ENST00000609024 TRPC5Q9UL62 973 aaPredicted RBP26.31■■□□□ 1.8
CHMP4A-211ENST00000609024 CLTCL1P53675 1640 aa26.3■■□□□ 1.8
CHMP4A-211ENST00000609024 PPARGC1BQ86YN6 1023 aaKnown RBP26.28■■□□□ 1.8
CHMP4A-211ENST00000609024 ORAI2Q96SN7 254 aa26.28■■□□□ 1.8
CHMP4A-211ENST00000609024 SOS2Q07890 1332 aaPredicted RBP26.27■■□□□ 1.8
CHMP4A-211ENST00000609024 PTCH1Q13635 1447 aa26.27■■□□□ 1.8
CHMP4A-211ENST00000609024 ROBO2Q9HCK4 1378 aa26.22■■□□□ 1.79
CHMP4A-211ENST00000609024 LAMC1P11047 1609 aa26.21■■□□□ 1.79
CHMP4A-211ENST00000609024 RPGRIP1LQ68CZ1 1315 aa26.21■■□□□ 1.79
CHMP4A-211ENST00000609024 ZRANB1Q9UGI0 708 aa26.21■■□□□ 1.79
CHMP4A-211ENST00000609024 ESCO1Q5FWF5 840 aa26.2■■□□□ 1.78
CHMP4A-211ENST00000609024 FNBP4Q8N3X1 1017 aaPredicted RBP26.2■■□□□ 1.78
CHMP4A-211ENST00000609024 HFM1A2PYH4 1435 aa26.2■■□□□ 1.78
CHMP4A-211ENST00000609024 NPHP3Q7Z494 1330 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms