RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
HDDC2-207ENST00000608532 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
HDDC2-207ENST00000608532 IRF6O14896 467 aa10.75□□□□□ -0.69
HDDC2-207ENST00000608532 SLF2Q8IX21 1173 aa10.75□□□□□ -0.69
HDDC2-207ENST00000608532 MINK1Q8N4C8 1332 aaPredicted RBP10.74□□□□□ -0.69
HDDC2-207ENST00000608532 CCDC102AQ96A19 550 aa10.73□□□□□ -0.69
HDDC2-207ENST00000608532 ZMYND10O75800 440 aa10.72□□□□□ -0.69
HDDC2-207ENST00000608532 BARGINQ6ZT62 677 aa10.72□□□□□ -0.69
HDDC2-207ENST00000608532 PHOX2BQ99453 314 aa10.72□□□□□ -0.69
HDDC2-207ENST00000608532 NYAP1Q6ZVC0 841 aa10.69□□□□□ -0.7
HDDC2-207ENST00000608532 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
HDDC2-207ENST00000608532 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
HDDC2-207ENST00000608532 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
HDDC2-207ENST00000608532 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
HDDC2-207ENST00000608532 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
HDDC2-207ENST00000608532 APLP1P51693 650 aa10.65□□□□□ -0.7
HDDC2-207ENST00000608532 RDH13Q8NBN7 331 aa10.65□□□□□ -0.7
HDDC2-207ENST00000608532 SLC10A3P09131 477 aa10.64□□□□□ -0.71
HDDC2-207ENST00000608532 RSPH4AQ5TD94 716 aa10.64□□□□□ -0.71
HDDC2-207ENST00000608532 CFHP08603 1231 aa10.63□□□□□ -0.71
HDDC2-207ENST00000608532 KMT5BQ4FZB7 885 aa10.62□□□□□ -0.71
HDDC2-207ENST00000608532 SLC24A3Q9HC58 644 aa10.61□□□□□ -0.71
HDDC2-207ENST00000608532 SULF1Q8IWU6 871 aa10.6□□□□□ -0.71
HDDC2-207ENST00000608532 PRR14Q9BWN1 585 aa10.6□□□□□ -0.71
HDDC2-207ENST00000608532 CLCN1P35523 988 aa10.59□□□□□ -0.71
HDDC2-207ENST00000608532 COPS2P61201 443 aa10.59□□□□□ -0.71
HDDC2-207ENST00000608532 TTLL12Q14166 644 aaPredicted RBP10.59□□□□□ -0.71
HDDC2-207ENST00000608532 AK7Q96M32 723 aa10.59□□□□□ -0.71
HDDC2-207ENST00000608532 MTRQ99707 1265 aa10.58□□□□□ -0.72
HDDC2-207ENST00000608532 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
HDDC2-207ENST00000608532 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
HDDC2-207ENST00000608532 KCNC4Q03721 635 aa10.57□□□□□ -0.72
HDDC2-207ENST00000608532 TRIM66O15016 1216 aa10.55□□□□□ -0.72
HDDC2-207ENST00000608532 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
HDDC2-207ENST00000608532 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
HDDC2-207ENST00000608532 TJAP1Q5JTD0 557 aa10.55□□□□□ -0.72
HDDC2-207ENST00000608532 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
HDDC2-207ENST00000608532 BLOC1S3Q6QNY0 202 aa10.54□□□□□ -0.72
HDDC2-207ENST00000608532 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
HDDC2-207ENST00000608532 AMHR2Q16671 573 aa10.53□□□□□ -0.72
HDDC2-207ENST00000608532 ZNF516Q92618 1163 aa10.53□□□□□ -0.72
HDDC2-207ENST00000608532 CD46P15529 392 aa10.52□□□□□ -0.73
HDDC2-207ENST00000608532 GCGRP47871 477 aa10.52□□□□□ -0.73
HDDC2-207ENST00000608532 PUS10Q3MIT2 529 aaKnown RBP10.52□□□□□ -0.73
HDDC2-207ENST00000608532 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.73
HDDC2-207ENST00000608532 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
HDDC2-207ENST00000608532 FUT2Q10981 343 aa10.5□□□□□ -0.73
HDDC2-207ENST00000608532 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
HDDC2-207ENST00000608532 PDE4DQ08499 809 aa10.49□□□□□ -0.73
HDDC2-207ENST00000608532 TPRNQ4KMQ1 711 aa10.49□□□□□ -0.73
HDDC2-207ENST00000608532 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
HDDC2-207ENST00000608532 PARP9Q8IXQ6 854 aa10.49□□□□□ -0.73
HDDC2-207ENST00000608532 NKX2-3Q8TAU0 364 aa10.48□□□□□ -0.73
HDDC2-207ENST00000608532 ZPR1O75312 459 aa10.47□□□□□ -0.73
HDDC2-207ENST00000608532 NR1I2O75469 434 aa10.47□□□□□ -0.73
HDDC2-207ENST00000608532 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
HDDC2-207ENST00000608532 KDM4AO75164 1064 aa10.46□□□□□ -0.73
HDDC2-207ENST00000608532 ATP6V1AP38606 617 aa10.46□□□□□ -0.73
HDDC2-207ENST00000608532 TLL1O43897 1013 aa10.45□□□□□ -0.74
HDDC2-207ENST00000608532 NUTM1Q86Y26 1132 aa10.45□□□□□ -0.74
HDDC2-207ENST00000608532 A0A0G2JS52 829 aa10.44□□□□□ -0.74
HDDC2-207ENST00000608532 GRIPAP1Q4V328 841 aa10.44□□□□□ -0.74
HDDC2-207ENST00000608532 MORN1Q5T089 497 aa10.44□□□□□ -0.74
HDDC2-207ENST00000608532 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
HDDC2-207ENST00000608532 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
HDDC2-207ENST00000608532 SLC27A5Q9Y2P5 690 aa10.42□□□□□ -0.74
HDDC2-207ENST00000608532 MS4A1P11836 297 aa10.41□□□□□ -0.74
HDDC2-207ENST00000608532 USP46P62068 366 aa10.4□□□□□ -0.74
HDDC2-207ENST00000608532 HLA-CQ95604 372 aa10.4□□□□□ -0.74
HDDC2-207ENST00000608532 HOXA2O43364 376 aa10.38□□□□□ -0.75
HDDC2-207ENST00000608532 GUCA2AQ02747 115 aa10.38□□□□□ -0.75
HDDC2-207ENST00000608532 PPP1R18Q6NYC8 613 aa10.38□□□□□ -0.75
HDDC2-207ENST00000608532 SPIRE2Q8WWL2 714 aa10.38□□□□□ -0.75
HDDC2-207ENST00000608532 SPSB2Q99619 263 aa10.38□□□□□ -0.75
HDDC2-207ENST00000608532 ADH1BP00325 375 aa10.37□□□□□ -0.75
HDDC2-207ENST00000608532 GPBP1L1Q9HC44 474 aaPredicted RBP10.37□□□□□ -0.75
HDDC2-207ENST00000608532 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-207ENST00000608532 GGCXP38435 758 aa10.36□□□□□ -0.75
HDDC2-207ENST00000608532 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.36□□□□□ -0.75
HDDC2-207ENST00000608532 S1PR4O95977 384 aa10.35□□□□□ -0.75
HDDC2-207ENST00000608532 RNF19BQ6ZMZ0 732 aa10.35□□□□□ -0.75
HDDC2-207ENST00000608532 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
HDDC2-207ENST00000608532 NDUFV2P19404 249 aa10.34□□□□□ -0.75
HDDC2-207ENST00000608532 Q3C1V9 767 aa10.34□□□□□ -0.75
HDDC2-207ENST00000608532 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
HDDC2-207ENST00000608532 SLC6A16Q9GZN6 736 aa10.34□□□□□ -0.75
HDDC2-207ENST00000608532 FDX1P10109 184 aa10.33□□□□□ -0.76
HDDC2-207ENST00000608532 THAP11Q96EK4 314 aa10.33□□□□□ -0.76
HDDC2-207ENST00000608532 KDM4CQ9H3R0 1056 aa10.33□□□□□ -0.76
HDDC2-207ENST00000608532 MOXD2PA6NHM9 499 aa10.32□□□□□ -0.76
HDDC2-207ENST00000608532 BRICD5Q6PL45 260 aa10.32□□□□□ -0.76
HDDC2-207ENST00000608532 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
HDDC2-207ENST00000608532 NEUROD2Q15784 382 aa10.31□□□□□ -0.76
HDDC2-207ENST00000608532 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
HDDC2-207ENST00000608532 DIXDC1Q155Q3 683 aa10.3□□□□□ -0.76
HDDC2-207ENST00000608532 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
HDDC2-207ENST00000608532 FAM160A2Q8N612 972 aaPredicted RBP10.29□□□□□ -0.76
HDDC2-207ENST00000608532 PRDM9Q9NQV7 894 aa10.29□□□□□ -0.76
HDDC2-207ENST00000608532 SALL2Q9Y467 1007 aaPredicted RBP10.29□□□□□ -0.76
HDDC2-207ENST00000608532 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms