RNA–Protein interactions for RNA: ENST00000606498.5

TM2D1-212, Transcript of TM2 domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TM2D1, Length 969 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-212ENST00000606498 KIF1BO60333 1816 aa26.14■■□□□ 1.78
TM2D1-212ENST00000606498 EID1Q9Y6B2 187 aa26.14■■□□□ 1.78
TM2D1-212ENST00000606498 CHD2O14647 1828 aaKnown RBP26.11■■□□□ 1.77
TM2D1-212ENST00000606498 NRXN3Q9Y4C0 1643 aa26.1■■□□□ 1.77
TM2D1-212ENST00000606498 PLEKHG1Q9ULL1 1385 aa26.08■■□□□ 1.77
TM2D1-212ENST00000606498 DIP2AQ14689 1571 aa26.07■■□□□ 1.76
TM2D1-212ENST00000606498 NEXMIFQ5QGS0 1516 aa26.05■■□□□ 1.76
TM2D1-212ENST00000606498 UBAP1LF5GYI3 381 aa26.04■■□□□ 1.76
TM2D1-212ENST00000606498 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
TM2D1-212ENST00000606498 ADAMTS13Q76LX8 1427 aa26.02■■□□□ 1.76
TM2D1-212ENST00000606498 CHGAP10645 457 aaKnown RBP26.01■■□□□ 1.75
TM2D1-212ENST00000606498 SLC26A8Q96RN1 970 aa26.01■■□□□ 1.75
TM2D1-212ENST00000606498 SETBP1Q9Y6X0 1596 aa26.01■■□□□ 1.75
TM2D1-212ENST00000606498 SENP3Q9H4L4 574 aaPredicted RBP25.99■■□□□ 1.75
TM2D1-212ENST00000606498 PPLO60437 1756 aa25.99■■□□□ 1.75
TM2D1-212ENST00000606498 SETD1AO15047 1707 aaKnown RBP25.98■■□□□ 1.75
TM2D1-212ENST00000606498 TRIM52Q96A61 297 aa25.97■■□□□ 1.75
TM2D1-212ENST00000606498 XRN1Q8IZH2 1706 aaKnown RBP25.97■■□□□ 1.75
TM2D1-212ENST00000606498 NUTM2DQ5VT03 806 aaPredicted RBP25.96■■□□□ 1.75
TM2D1-212ENST00000606498 IFT172Q9UG01 1749 aa25.95■■□□□ 1.74
TM2D1-212ENST00000606498 PPP1R15AO75807 674 aaPredicted RBP25.95■■□□□ 1.74
TM2D1-212ENST00000606498 SLC4A1APQ9BWU0 796 aaKnown RBP25.93■■□□□ 1.74
TM2D1-212ENST00000606498 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
TM2D1-212ENST00000606498 SETD5Q9C0A6 1442 aa25.91■■□□□ 1.74
TM2D1-212ENST00000606498 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
TM2D1-212ENST00000606498 KCNA6P17658 529 aa25.9■■□□□ 1.74
TM2D1-212ENST00000606498 TOM1O60784 492 aa25.87■■□□□ 1.73
TM2D1-212ENST00000606498 PIP4K2BP78356 416 aa25.87■■□□□ 1.73
TM2D1-212ENST00000606498 FOXD1Q16676 465 aa25.87■■□□□ 1.73
TM2D1-212ENST00000606498 BCANQ96GW7 911 aa25.87■■□□□ 1.73
TM2D1-212ENST00000606498 PTPRUQ92729 1446 aa25.87■■□□□ 1.73
TM2D1-212ENST00000606498 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
TM2D1-212ENST00000606498 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
TM2D1-212ENST00000606498 SCAF1Q9H7N4 1312 aaKnown RBP25.85■■□□□ 1.73
TM2D1-212ENST00000606498 ROBO1Q9Y6N7 1651 aa25.84■■□□□ 1.73
TM2D1-212ENST00000606498 TBX22Q9Y458 520 aa25.84■■□□□ 1.73
TM2D1-212ENST00000606498 PIK3R4Q99570 1358 aa25.83■■□□□ 1.73
TM2D1-212ENST00000606498 RBM33Q96EV2 1170 aaKnown RBP25.83■■□□□ 1.73
TM2D1-212ENST00000606498 ZNF326Q5BKZ1 582 aaKnown RBP25.82■■□□□ 1.72
TM2D1-212ENST00000606498 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.82■■□□□ 1.72
TM2D1-212ENST00000606498 CCDC144AA2RUR9 1427 aa25.8■■□□□ 1.72
TM2D1-212ENST00000606498 SPATA31E1Q6ZUB1 1445 aa25.8■■□□□ 1.72
TM2D1-212ENST00000606498 MPHOSPH9Q99550 1183 aa25.8■■□□□ 1.72
TM2D1-212ENST00000606498 HSPA1LP34931 641 aa25.79■■□□□ 1.72
TM2D1-212ENST00000606498 NALCNQ8IZF0 1738 aa25.79■■□□□ 1.72
TM2D1-212ENST00000606498 PROSER2Q86WR7 435 aaPredicted RBP25.78■■□□□ 1.72
TM2D1-212ENST00000606498 METP08581 1390 aa25.77■■□□□ 1.72
TM2D1-212ENST00000606498 MED1Q15648 1581 aaPredicted RBP25.75■■□□□ 1.71
TM2D1-212ENST00000606498 MSH6P52701 1360 aa25.72■■□□□ 1.71
TM2D1-212ENST00000606498 NCOA3Q9Y6Q9 1424 aa25.71■■□□□ 1.71
TM2D1-212ENST00000606498 ASXL1Q8IXJ9 1541 aa25.7■■□□□ 1.7
TM2D1-212ENST00000606498 FAM135BQ49AJ0 1406 aa25.69■■□□□ 1.7
TM2D1-212ENST00000606498 PRAG1Q86YV5 1406 aa25.69■■□□□ 1.7
TM2D1-212ENST00000606498 PHLPP1O60346 1717 aa25.67■■□□□ 1.7
TM2D1-212ENST00000606498 AMOTL2Q9Y2J4 779 aa25.67■■□□□ 1.7
TM2D1-212ENST00000606498 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
TM2D1-212ENST00000606498 ACIN1Q9UKV3 1341 aaKnown RBP25.66■■□□□ 1.7
TM2D1-212ENST00000606498 KNDC1Q76NI1 1749 aa25.66■■□□□ 1.7
TM2D1-212ENST00000606498 DISP3Q9P2K9 1392 aa25.66■■□□□ 1.7
TM2D1-212ENST00000606498 PTCH1Q13635 1447 aa25.65■■□□□ 1.7
TM2D1-212ENST00000606498 PIK3C2GO75747 1445 aa25.63■■□□□ 1.69
TM2D1-212ENST00000606498 COL16A1Q07092 1604 aaPredicted RBP25.63■■□□□ 1.69
TM2D1-212ENST00000606498 LAMC1P11047 1609 aa25.63■■□□□ 1.69
TM2D1-212ENST00000606498 DCCP43146 1447 aa25.63■■□□□ 1.69
TM2D1-212ENST00000606498 VGFO15240 615 aaPredicted RBP25.62■■□□□ 1.69
TM2D1-212ENST00000606498 ADGRL3Q9HAR2 1447 aa25.62■■□□□ 1.69
TM2D1-212ENST00000606498 MYOM2P54296 1465 aa25.61■■□□□ 1.69
TM2D1-212ENST00000606498 ADGRF5Q8IZF2 1346 aa25.61■■□□□ 1.69
TM2D1-212ENST00000606498 NRXN1Q9ULB1 1477 aa25.6■■□□□ 1.69
TM2D1-212ENST00000606498 ANKRD30BQ9BXX2 1392 aa25.59■■□□□ 1.69
TM2D1-212ENST00000606498 AHDC1Q5TGY3 1603 aaPredicted RBP25.59■■□□□ 1.69
TM2D1-212ENST00000606498 ROBO2Q9HCK4 1378 aa25.57■■□□□ 1.68
TM2D1-212ENST00000606498 NHSL1Q5SYE7 1610 aa25.57■■□□□ 1.68
TM2D1-212ENST00000606498 RGL3Q3MIN7 710 aa25.57■■□□□ 1.68
TM2D1-212ENST00000606498 C14orf37Q86TY3 774 aa25.56■■□□□ 1.68
TM2D1-212ENST00000606498 MST1RQ04912 1400 aa25.55■■□□□ 1.68
TM2D1-212ENST00000606498 SLAIN2Q9P270 581 aa25.54■■□□□ 1.68
TM2D1-212ENST00000606498 C19orf44Q9H6X5 657 aa25.53■■□□□ 1.68
TM2D1-212ENST00000606498 HRCP23327 699 aa25.52■■□□□ 1.68
TM2D1-212ENST00000606498 TECPR2O15040 1411 aa25.52■■□□□ 1.68
TM2D1-212ENST00000606498 CDC42BPGQ6DT37 1551 aa25.52■■□□□ 1.68
TM2D1-212ENST00000606498 SHPRHQ149N8 1683 aa25.5■■□□□ 1.67
TM2D1-212ENST00000606498 CADPS2Q86UW7 1296 aa25.49■■□□□ 1.67
TM2D1-212ENST00000606498 ILDR2Q71H61 639 aa25.48■■□□□ 1.67
TM2D1-212ENST00000606498 ATF3P18847 181 aa25.47■■□□□ 1.67
TM2D1-212ENST00000606498 LRPPRCP42704 1394 aaKnown RBP25.45■■□□□ 1.67
TM2D1-212ENST00000606498 ADGRB1O14514 1584 aa25.45■■□□□ 1.66
TM2D1-212ENST00000606498 FMN2Q9NZ56 1722 aa25.43■■□□□ 1.66
TM2D1-212ENST00000606498 YTHDC2Q9H6S0 1430 aaKnown RBP25.43■■□□□ 1.66
TM2D1-212ENST00000606498 BRINP3Q76B58 766 aa25.42■■□□□ 1.66
TM2D1-212ENST00000606498 C1orf167Q5SNV9 1468 aa25.4■■□□□ 1.66
TM2D1-212ENST00000606498 PLEKHH1Q9ULM0 1364 aa25.39■■□□□ 1.65
TM2D1-212ENST00000606498 TMEM132EQ6IEE7 984 aa25.38■■□□□ 1.65
TM2D1-212ENST00000606498 ABCC11Q96J66 1382 aa25.38■■□□□ 1.65
TM2D1-212ENST00000606498 LRP6O75581 1613 aa25.37■■□□□ 1.65
TM2D1-212ENST00000606498 DHX57Q6P158 1386 aaKnown RBP25.37■■□□□ 1.65
TM2D1-212ENST00000606498 RGPD8O14715 1765 aaPredicted RBP25.36■■□□□ 1.65
TM2D1-212ENST00000606498 JCADQ9P266 1359 aa25.36■■□□□ 1.65
TM2D1-212ENST00000606498 ARHGEF28Q8N1W1 1705 aaKnown RBP25.36■■□□□ 1.65
TM2D1-212ENST00000606498 DLC1Q96QB1 1528 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms