RNA–Protein interactions for RNA: ENST00000603439.1

AC078880.3-201, humanhuman

BASIC

Gene AC078880.3, Length 1,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.3-201ENST00000603439 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
AC078880.3-201ENST00000603439 EID1Q9Y6B2 187 aa18.3■□□□□ 0.52
AC078880.3-201ENST00000603439 SLC52A1Q9NWF4 448 aa18.29■□□□□ 0.52
AC078880.3-201ENST00000603439 NUP155O75694 1391 aa18.29■□□□□ 0.52
AC078880.3-201ENST00000603439 NAIPQ13075 1403 aa18.26■□□□□ 0.51
AC078880.3-201ENST00000603439 RIMS2Q9UQ26 1411 aa18.26■□□□□ 0.51
AC078880.3-201ENST00000603439 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
AC078880.3-201ENST00000603439 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
AC078880.3-201ENST00000603439 TRPM2O94759 1503 aa18.24■□□□□ 0.51
AC078880.3-201ENST00000603439 CLTCL1P53675 1640 aa18.24■□□□□ 0.51
AC078880.3-201ENST00000603439 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
AC078880.3-201ENST00000603439 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
AC078880.3-201ENST00000603439 PLEKHG1Q9ULL1 1385 aa18.23■□□□□ 0.51
AC078880.3-201ENST00000603439 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
AC078880.3-201ENST00000603439 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
AC078880.3-201ENST00000603439 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
AC078880.3-201ENST00000603439 TOM1O60784 492 aa18.21■□□□□ 0.51
AC078880.3-201ENST00000603439 NRXN3Q9Y4C0 1643 aa18.2■□□□□ 0.5
AC078880.3-201ENST00000603439 MED1Q15648 1581 aaPredicted RBP18.2■□□□□ 0.5
AC078880.3-201ENST00000603439 KIF1BO60333 1816 aa18.19■□□□□ 0.5
AC078880.3-201ENST00000603439 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
AC078880.3-201ENST00000603439 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
AC078880.3-201ENST00000603439 HSPA1LP34931 641 aa18.17■□□□□ 0.5
AC078880.3-201ENST00000603439 ADAMTS13Q76LX8 1427 aa18.16■□□□□ 0.5
AC078880.3-201ENST00000603439 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
AC078880.3-201ENST00000603439 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
AC078880.3-201ENST00000603439 NEXMIFQ5QGS0 1516 aa18.16■□□□□ 0.5
AC078880.3-201ENST00000603439 SETBP1Q9Y6X0 1596 aa18.16■□□□□ 0.5
AC078880.3-201ENST00000603439 ROBO1Q9Y6N7 1651 aa18.15■□□□□ 0.5
AC078880.3-201ENST00000603439 XRN1Q8IZH2 1706 aaKnown RBP18.15■□□□□ 0.5
AC078880.3-201ENST00000603439 KCNA6P17658 529 aa18.13■□□□□ 0.49
AC078880.3-201ENST00000603439 BCANQ96GW7 911 aa18.12■□□□□ 0.49
AC078880.3-201ENST00000603439 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
AC078880.3-201ENST00000603439 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
AC078880.3-201ENST00000603439 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
AC078880.3-201ENST00000603439 HDGFP51858 240 aaKnown RBP18.08■□□□□ 0.48
AC078880.3-201ENST00000603439 PPLO60437 1756 aa18.08■□□□□ 0.48
AC078880.3-201ENST00000603439 PIK3R4Q99570 1358 aa18.07■□□□□ 0.48
AC078880.3-201ENST00000603439 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
AC078880.3-201ENST00000603439 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
AC078880.3-201ENST00000603439 ILDR2Q71H61 639 aa18.06■□□□□ 0.48
AC078880.3-201ENST00000603439 PROSER2Q86WR7 435 aaPredicted RBP18.06■□□□□ 0.48
AC078880.3-201ENST00000603439 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
AC078880.3-201ENST00000603439 MSH6P52701 1360 aa18.05■□□□□ 0.48
AC078880.3-201ENST00000603439 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
AC078880.3-201ENST00000603439 FAM135BQ49AJ0 1406 aa18.04■□□□□ 0.48
AC078880.3-201ENST00000603439 PHLPP1O60346 1717 aa18.03■□□□□ 0.48
AC078880.3-201ENST00000603439 IFT172Q9UG01 1749 aa18.03■□□□□ 0.48
AC078880.3-201ENST00000603439 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
AC078880.3-201ENST00000603439 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
AC078880.3-201ENST00000603439 NCOA3Q9Y6Q9 1424 aa18.01■□□□□ 0.47
AC078880.3-201ENST00000603439 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
AC078880.3-201ENST00000603439 COL16A1Q07092 1604 aaPredicted RBP18■□□□□ 0.47
AC078880.3-201ENST00000603439 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
AC078880.3-201ENST00000603439 METP08581 1390 aa17.97■□□□□ 0.47
AC078880.3-201ENST00000603439 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
AC078880.3-201ENST00000603439 DCCP43146 1447 aa17.95■□□□□ 0.46
AC078880.3-201ENST00000603439 CCDC144AA2RUR9 1427 aa17.94■□□□□ 0.46
AC078880.3-201ENST00000603439 PTCH1Q13635 1447 aa17.93■□□□□ 0.46
AC078880.3-201ENST00000603439 AMOTL2Q9Y2J4 779 aa17.93■□□□□ 0.46
AC078880.3-201ENST00000603439 NHSL1Q5SYE7 1610 aa17.93■□□□□ 0.46
AC078880.3-201ENST00000603439 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
AC078880.3-201ENST00000603439 PRAG1Q86YV5 1406 aa17.92■□□□□ 0.46
AC078880.3-201ENST00000603439 ADGRL3Q9HAR2 1447 aa17.92■□□□□ 0.46
AC078880.3-201ENST00000603439 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
AC078880.3-201ENST00000603439 SETD5Q9C0A6 1442 aa17.91■□□□□ 0.46
AC078880.3-201ENST00000603439 SHPRHQ149N8 1683 aa17.91■□□□□ 0.46
AC078880.3-201ENST00000603439 ASXL1Q8IXJ9 1541 aa17.91■□□□□ 0.46
AC078880.3-201ENST00000603439 KNDC1Q76NI1 1749 aa17.9■□□□□ 0.46
AC078880.3-201ENST00000603439 SLAIN2Q9P270 581 aa17.9■□□□□ 0.46
AC078880.3-201ENST00000603439 SOCS7O14512 581 aa17.89■□□□□ 0.45
AC078880.3-201ENST00000603439 MST1RQ04912 1400 aa17.89■□□□□ 0.45
AC078880.3-201ENST00000603439 CADPS2Q86UW7 1296 aa17.87■□□□□ 0.45
AC078880.3-201ENST00000603439 MPHOSPH9Q99550 1183 aa17.87■□□□□ 0.45
AC078880.3-201ENST00000603439 C19orf44Q9H6X5 657 aa17.87■□□□□ 0.45
AC078880.3-201ENST00000603439 RPGRIP1LQ68CZ1 1315 aa17.87■□□□□ 0.45
AC078880.3-201ENST00000603439 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
AC078880.3-201ENST00000603439 LAMC1P11047 1609 aa17.85■□□□□ 0.45
AC078880.3-201ENST00000603439 ATF3P18847 181 aa17.85■□□□□ 0.45
AC078880.3-201ENST00000603439 CDC42BPGQ6DT37 1551 aa17.84■□□□□ 0.45
AC078880.3-201ENST00000603439 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
AC078880.3-201ENST00000603439 ROBO2Q9HCK4 1378 aa17.84■□□□□ 0.45
AC078880.3-201ENST00000603439 JCADQ9P266 1359 aa17.84■□□□□ 0.45
AC078880.3-201ENST00000603439 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
AC078880.3-201ENST00000603439 LRP6O75581 1613 aa17.83■□□□□ 0.45
AC078880.3-201ENST00000603439 MYOM2P54296 1465 aa17.82■□□□□ 0.44
AC078880.3-201ENST00000603439 ANKRD30BQ9BXX2 1392 aa17.8■□□□□ 0.44
AC078880.3-201ENST00000603439 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
AC078880.3-201ENST00000603439 BRINP3Q76B58 766 aa17.8■□□□□ 0.44
AC078880.3-201ENST00000603439 NRXN1Q9ULB1 1477 aa17.8■□□□□ 0.44
AC078880.3-201ENST00000603439 TECPR2O15040 1411 aa17.8■□□□□ 0.44
AC078880.3-201ENST00000603439 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
AC078880.3-201ENST00000603439 C1orf167Q5SNV9 1468 aa17.77■□□□□ 0.44
AC078880.3-201ENST00000603439 RGS17Q9UGC6 210 aaPredicted RBP17.77■□□□□ 0.44
AC078880.3-201ENST00000603439 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
AC078880.3-201ENST00000603439 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
AC078880.3-201ENST00000603439 LRPPRCP42704 1394 aaKnown RBP17.74■□□□□ 0.43
AC078880.3-201ENST00000603439 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
AC078880.3-201ENST00000603439 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
AC078880.3-201ENST00000603439 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms