RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 PPP1R15AO75807 674 aaPredicted RBP28.96■■■□□ 2.23
FARP1-229ENST00000600190 MYO5BQ9ULV0 1848 aa28.95■■■□□ 2.23
FARP1-229ENST00000600190 HDGFP51858 240 aaKnown RBP28.95■■■□□ 2.22
FARP1-229ENST00000600190 CHGAP10645 457 aaKnown RBP28.94■■■□□ 2.22
FARP1-229ENST00000600190 GCC2Q8IWJ2 1684 aa28.93■■■□□ 2.22
FARP1-229ENST00000600190 ZFYVE9O95405 1425 aa28.93■■■□□ 2.22
FARP1-229ENST00000600190 RIMS2Q9UQ26 1411 aa28.93■■■□□ 2.22
FARP1-229ENST00000600190 UNC13BO14795 1591 aa28.92■■■□□ 2.22
FARP1-229ENST00000600190 NKTRP30414 1462 aaKnown RBP28.91■■■□□ 2.22
FARP1-229ENST00000600190 PLEKHG1Q9ULL1 1385 aa28.9■■■□□ 2.22
FARP1-229ENST00000600190 ITGAEP38570 1179 aa28.9■■■□□ 2.22
FARP1-229ENST00000600190 NWD1Q149M9 1564 aa28.9■■■□□ 2.22
FARP1-229ENST00000600190 TMEM131LA2VDJ0 1609 aa28.9■■■□□ 2.22
FARP1-229ENST00000600190 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
FARP1-229ENST00000600190 MSH6P52701 1360 aa28.88■■■□□ 2.21
FARP1-229ENST00000600190 ROBO1Q9Y6N7 1651 aa28.87■■■□□ 2.21
FARP1-229ENST00000600190 NUTM2DQ5VT03 806 aaPredicted RBP28.87■■■□□ 2.21
FARP1-229ENST00000600190 E9PCH4 1651 aa28.86■■■□□ 2.21
FARP1-229ENST00000600190 PPARGC1BQ86YN6 1023 aaKnown RBP28.86■■■□□ 2.21
FARP1-229ENST00000600190 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.85■■■□□ 2.21
FARP1-229ENST00000600190 RGS17Q9UGC6 210 aaPredicted RBP28.84■■■□□ 2.21
FARP1-229ENST00000600190 CHD2O14647 1828 aaKnown RBP28.83■■■□□ 2.21
FARP1-229ENST00000600190 SLAIN2Q9P270 581 aa28.83■■■□□ 2.21
FARP1-229ENST00000600190 TBX22Q9Y458 520 aa28.83■■■□□ 2.21
FARP1-229ENST00000600190 NUP155O75694 1391 aa28.83■■■□□ 2.21
FARP1-229ENST00000600190 IQGAP3Q86VI3 1631 aa28.82■■■□□ 2.2
FARP1-229ENST00000600190 C14orf37Q86TY3 774 aa28.78■■■□□ 2.2
FARP1-229ENST00000600190 ADAMTS13Q76LX8 1427 aa28.74■■■□□ 2.19
FARP1-229ENST00000600190 PHLPP1O60346 1717 aa28.72■■■□□ 2.19
FARP1-229ENST00000600190 NCOA3Q9Y6Q9 1424 aa28.69■■■□□ 2.18
FARP1-229ENST00000600190 DIP2AQ14689 1571 aa28.69■■■□□ 2.18
FARP1-229ENST00000600190 PIK3R4Q99570 1358 aa28.68■■■□□ 2.18
FARP1-229ENST00000600190 POTEAQ6S8J7 498 aa28.68■■■□□ 2.18
FARP1-229ENST00000600190 ATF3P18847 181 aa28.66■■■□□ 2.18
FARP1-229ENST00000600190 C19orf44Q9H6X5 657 aa28.66■■■□□ 2.18
FARP1-229ENST00000600190 AMOTL2Q9Y2J4 779 aa28.66■■■□□ 2.18
FARP1-229ENST00000600190 JCADQ9P266 1359 aa28.65■■■□□ 2.18
FARP1-229ENST00000600190 CADPS2Q86UW7 1296 aa28.65■■■□□ 2.18
FARP1-229ENST00000600190 TRPM2O94759 1503 aa28.64■■■□□ 2.18
FARP1-229ENST00000600190 ZNF326Q5BKZ1 582 aaKnown RBP28.64■■■□□ 2.18
FARP1-229ENST00000600190 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.63■■■□□ 2.17
FARP1-229ENST00000600190 SPHKAPQ2M3C7 1700 aa28.61■■■□□ 2.17
FARP1-229ENST00000600190 PTPRUQ92729 1446 aa28.6■■■□□ 2.17
FARP1-229ENST00000600190 COL16A1Q07092 1604 aaPredicted RBP28.58■■■□□ 2.17
FARP1-229ENST00000600190 NRXN3Q9Y4C0 1643 aa28.54■■■□□ 2.16
FARP1-229ENST00000600190 SETBP1Q9Y6X0 1596 aa28.53■■■□□ 2.16
FARP1-229ENST00000600190 SPATA31A6Q5VVP1 1343 aa28.51■■■□□ 2.15
FARP1-229ENST00000600190 MEX3CQ5U5Q3 659 aaKnown RBP28.51■■■□□ 2.15
FARP1-229ENST00000600190 METP08581 1390 aa28.5■■■□□ 2.15
FARP1-229ENST00000600190 BRINP3Q76B58 766 aa28.5■■■□□ 2.15
FARP1-229ENST00000600190 RRBP1Q9P2E9 1410 aaKnown RBP28.5■■■□□ 2.15
FARP1-229ENST00000600190 AHDC1Q5TGY3 1603 aaPredicted RBP28.5■■■□□ 2.15
FARP1-229ENST00000600190 CLTCL1P53675 1640 aa28.49■■■□□ 2.15
FARP1-229ENST00000600190 XRN1Q8IZH2 1706 aaKnown RBP28.49■■■□□ 2.15
FARP1-229ENST00000600190 NAIPQ13075 1403 aa28.48■■■□□ 2.15
FARP1-229ENST00000600190 LRP6O75581 1613 aa28.47■■■□□ 2.15
FARP1-229ENST00000600190 DCCP43146 1447 aa28.46■■■□□ 2.15
FARP1-229ENST00000600190 TRIM52Q96A61 297 aa28.45■■■□□ 2.14
FARP1-229ENST00000600190 NEXMIFQ5QGS0 1516 aa28.44■■■□□ 2.14
FARP1-229ENST00000600190 KIF1BO60333 1816 aa28.43■■■□□ 2.14
FARP1-229ENST00000600190 SHPRHQ149N8 1683 aa28.42■■■□□ 2.14
FARP1-229ENST00000600190 NUTM2BA6NNL0 878 aaPredicted RBP28.41■■■□□ 2.14
FARP1-229ENST00000600190 NUTM2EB1AL46 878 aaPredicted RBP28.41■■■□□ 2.14
FARP1-229ENST00000600190 NUTM2AQ8IVF1 878 aaPredicted RBP28.41■■■□□ 2.14
FARP1-229ENST00000600190 MST1RQ04912 1400 aa28.41■■■□□ 2.14
FARP1-229ENST00000600190 ASXL1Q8IXJ9 1541 aa28.4■■■□□ 2.14
FARP1-229ENST00000600190 ZNF772Q68DY9 489 aaPredicted RBP28.4■■■□□ 2.14
FARP1-229ENST00000600190 SETD1AO15047 1707 aaKnown RBP28.4■■■□□ 2.14
FARP1-229ENST00000600190 ADGRL3Q9HAR2 1447 aa28.36■■■□□ 2.13
FARP1-229ENST00000600190 VGFO15240 615 aaPredicted RBP28.36■■■□□ 2.13
FARP1-229ENST00000600190 SLC4A1APQ9BWU0 796 aaKnown RBP28.36■■■□□ 2.13
FARP1-229ENST00000600190 DDX17Q92841 729 aaKnown RBP28.34■■■□□ 2.13
FARP1-229ENST00000600190 HFM1A2PYH4 1435 aa28.34■■■□□ 2.13
FARP1-229ENST00000600190 LRRC59Q96AG4 307 aaKnown RBP28.33■■■□□ 2.13
FARP1-229ENST00000600190 SETD5Q9C0A6 1442 aa28.33■■■□□ 2.13
FARP1-229ENST00000600190 NALCNQ8IZF0 1738 aa28.32■■■□□ 2.12
FARP1-229ENST00000600190 NHSL1Q5SYE7 1610 aa28.32■■■□□ 2.12
FARP1-229ENST00000600190 RPGRIP1LQ68CZ1 1315 aa28.28■■■□□ 2.12
FARP1-229ENST00000600190 RXRBP28702 533 aa28.27■■■□□ 2.12
FARP1-229ENST00000600190 ROBO2Q9HCK4 1378 aa28.25■■■□□ 2.11
FARP1-229ENST00000600190 AFF2P51816 1311 aa28.25■■■□□ 2.11
FARP1-229ENST00000600190 FOXD1Q16676 465 aa28.25■■■□□ 2.11
FARP1-229ENST00000600190 C1orf167Q5SNV9 1468 aa28.25■■■□□ 2.11
FARP1-229ENST00000600190 PTCH1Q13635 1447 aa28.25■■■□□ 2.11
FARP1-229ENST00000600190 C8orf37Q96NL8 207 aa28.22■■■□□ 2.11
FARP1-229ENST00000600190 PNPLA6Q8IY17 1366 aa28.22■■■□□ 2.11
FARP1-229ENST00000600190 ORAI2Q96SN7 254 aa28.21■■■□□ 2.11
FARP1-229ENST00000600190 PPLO60437 1756 aa28.21■■■□□ 2.11
FARP1-229ENST00000600190 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.1
FARP1-229ENST00000600190 ADAMTS2O95450 1211 aa28.16■■■□□ 2.1
FARP1-229ENST00000600190 RGL3Q3MIN7 710 aa28.16■■■□□ 2.1
FARP1-229ENST00000600190 QTRT2Q9H974 415 aaKnown RBP28.15■■■□□ 2.1
FARP1-229ENST00000600190 PRAG1Q86YV5 1406 aa28.14■■■□□ 2.1
FARP1-229ENST00000600190 CCDC144AA2RUR9 1427 aa28.13■■■□□ 2.09
FARP1-229ENST00000600190 NGLY1Q96IV0 654 aa28.13■■■□□ 2.09
FARP1-229ENST00000600190 SOS2Q07890 1332 aaPredicted RBP28.13■■■□□ 2.09
FARP1-229ENST00000600190 ADGRF5Q8IZF2 1346 aa28.13■■■□□ 2.09
FARP1-229ENST00000600190 CDK12Q9NYV4 1490 aaPredicted RBP28.12■■■□□ 2.09
FARP1-229ENST00000600190 MPHOSPH9Q99550 1183 aa28.11■■■□□ 2.09
FARP1-229ENST00000600190 LAMC1P11047 1609 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms