RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 KCNA6P17658 529 aa28.27■■■□□ 2.12
SNRPA-206ENST00000599362 NAIPQ13075 1403 aa28.26■■■□□ 2.12
SNRPA-206ENST00000599362 PLEKHG1Q9ULL1 1385 aa28.26■■■□□ 2.12
SNRPA-206ENST00000599362 HDGFP51858 240 aaKnown RBP28.26■■■□□ 2.11
SNRPA-206ENST00000599362 HSPA1LP34931 641 aa28.25■■■□□ 2.11
SNRPA-206ENST00000599362 XIRP1Q702N8 1843 aaKnown RBP28.25■■■□□ 2.11
SNRPA-206ENST00000599362 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.22■■■□□ 2.11
SNRPA-206ENST00000599362 NWD1Q149M9 1564 aa28.21■■■□□ 2.11
SNRPA-206ENST00000599362 CHGAP10645 457 aaKnown RBP28.21■■■□□ 2.11
SNRPA-206ENST00000599362 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
SNRPA-206ENST00000599362 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
SNRPA-206ENST00000599362 TMEM94Q12767 1356 aa28.18■■■□□ 2.1
SNRPA-206ENST00000599362 NKTRP30414 1462 aaKnown RBP28.18■■■□□ 2.1
SNRPA-206ENST00000599362 BCANQ96GW7 911 aa28.17■■■□□ 2.1
SNRPA-206ENST00000599362 SPHKAPQ2M3C7 1700 aa28.17■■■□□ 2.1
SNRPA-206ENST00000599362 TBX22Q9Y458 520 aa28.15■■■□□ 2.1
SNRPA-206ENST00000599362 PROSER2Q86WR7 435 aaPredicted RBP28.14■■■□□ 2.1
SNRPA-206ENST00000599362 ADAMTS13Q76LX8 1427 aa28.13■■■□□ 2.09
SNRPA-206ENST00000599362 CHD2O14647 1828 aaKnown RBP28.12■■■□□ 2.09
SNRPA-206ENST00000599362 ILDR2Q71H61 639 aa28.11■■■□□ 2.09
SNRPA-206ENST00000599362 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
SNRPA-206ENST00000599362 NUTM2DQ5VT03 806 aaPredicted RBP28.1■■■□□ 2.09
SNRPA-206ENST00000599362 DIP2AQ14689 1571 aa28.1■■■□□ 2.09
SNRPA-206ENST00000599362 TRPM2O94759 1503 aa28.08■■■□□ 2.09
SNRPA-206ENST00000599362 PIK3R4Q99570 1358 aa28.07■■■□□ 2.08
SNRPA-206ENST00000599362 RBM33Q96EV2 1170 aaKnown RBP28.06■■■□□ 2.08
SNRPA-206ENST00000599362 FAM135BQ49AJ0 1406 aa28.06■■■□□ 2.08
SNRPA-206ENST00000599362 CLTCL1P53675 1640 aa28.05■■■□□ 2.08
SNRPA-206ENST00000599362 TRIM52Q96A61 297 aa28.03■■■□□ 2.08
SNRPA-206ENST00000599362 MED1Q15648 1581 aaPredicted RBP28.03■■■□□ 2.08
SNRPA-206ENST00000599362 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.08
SNRPA-206ENST00000599362 MSH6P52701 1360 aa28■■■□□ 2.07
SNRPA-206ENST00000599362 SETBP1Q9Y6X0 1596 aa28■■■□□ 2.07
SNRPA-206ENST00000599362 NRXN3Q9Y4C0 1643 aa27.99■■■□□ 2.07
SNRPA-206ENST00000599362 ZNF326Q5BKZ1 582 aaKnown RBP27.98■■■□□ 2.07
SNRPA-206ENST00000599362 SLC4A1APQ9BWU0 796 aaKnown RBP27.98■■■□□ 2.07
SNRPA-206ENST00000599362 NEXMIFQ5QGS0 1516 aa27.97■■■□□ 2.07
SNRPA-206ENST00000599362 PTPRUQ92729 1446 aa27.96■■■□□ 2.07
SNRPA-206ENST00000599362 KIF1BO60333 1816 aa27.95■■■□□ 2.06
SNRPA-206ENST00000599362 AMOTL2Q9Y2J4 779 aa27.93■■■□□ 2.06
SNRPA-206ENST00000599362 ROBO1Q9Y6N7 1651 aa27.93■■■□□ 2.06
SNRPA-206ENST00000599362 SLAIN2Q9P270 581 aa27.91■■■□□ 2.06
SNRPA-206ENST00000599362 SOCS7O14512 581 aa27.9■■■□□ 2.06
SNRPA-206ENST00000599362 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.05
SNRPA-206ENST00000599362 C19orf44Q9H6X5 657 aa27.87■■■□□ 2.05
SNRPA-206ENST00000599362 METP08581 1390 aa27.86■■■□□ 2.05
SNRPA-206ENST00000599362 RPGRIP1LQ68CZ1 1315 aa27.85■■■□□ 2.05
SNRPA-206ENST00000599362 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.84■■■□□ 2.05
SNRPA-206ENST00000599362 C14orf37Q86TY3 774 aa27.84■■■□□ 2.05
SNRPA-206ENST00000599362 VGFO15240 615 aaPredicted RBP27.83■■■□□ 2.05
SNRPA-206ENST00000599362 CADPS2Q86UW7 1296 aa27.83■■■□□ 2.05
SNRPA-206ENST00000599362 FOXD1Q16676 465 aa27.82■■■□□ 2.04
SNRPA-206ENST00000599362 MPHOSPH9Q99550 1183 aa27.82■■■□□ 2.04
SNRPA-206ENST00000599362 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
SNRPA-206ENST00000599362 DCCP43146 1447 aa27.79■■■□□ 2.04
SNRPA-206ENST00000599362 ATF3P18847 181 aa27.79■■■□□ 2.04
SNRPA-206ENST00000599362 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
SNRPA-206ENST00000599362 CCDC144AA2RUR9 1427 aa27.76■■■□□ 2.04
SNRPA-206ENST00000599362 SETD5Q9C0A6 1442 aa27.76■■■□□ 2.04
SNRPA-206ENST00000599362 PPLO60437 1756 aa27.76■■■□□ 2.03
SNRPA-206ENST00000599362 SETD1AO15047 1707 aaKnown RBP27.76■■■□□ 2.03
SNRPA-206ENST00000599362 PHLPP1O60346 1717 aa27.75■■■□□ 2.03
SNRPA-206ENST00000599362 SPATA31E1Q6ZUB1 1445 aa27.73■■■□□ 2.03
SNRPA-206ENST00000599362 PRAG1Q86YV5 1406 aa27.72■■■□□ 2.03
SNRPA-206ENST00000599362 COL16A1Q07092 1604 aaPredicted RBP27.71■■■□□ 2.03
SNRPA-206ENST00000599362 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.03
SNRPA-206ENST00000599362 PTCH1Q13635 1447 aa27.7■■■□□ 2.03
SNRPA-206ENST00000599362 ADGRL3Q9HAR2 1447 aa27.7■■■□□ 2.03
SNRPA-206ENST00000599362 JCADQ9P266 1359 aa27.7■■■□□ 2.02
SNRPA-206ENST00000599362 BRINP3Q76B58 766 aa27.68■■■□□ 2.02
SNRPA-206ENST00000599362 RGS17Q9UGC6 210 aaPredicted RBP27.68■■■□□ 2.02
SNRPA-206ENST00000599362 MST1RQ04912 1400 aa27.67■■■□□ 2.02
SNRPA-206ENST00000599362 ANKRD30BQ9BXX2 1392 aa27.65■■■□□ 2.02
SNRPA-206ENST00000599362 RAB3GAP2Q9H2M9 1393 aa27.65■■■□□ 2.02
SNRPA-206ENST00000599362 ROBO2Q9HCK4 1378 aa27.65■■■□□ 2.02
SNRPA-206ENST00000599362 NALCNQ8IZF0 1738 aa27.65■■■□□ 2.02
SNRPA-206ENST00000599362 ADGRF5Q8IZF2 1346 aa27.65■■■□□ 2.02
SNRPA-206ENST00000599362 RGL3Q3MIN7 710 aa27.63■■■□□ 2.01
SNRPA-206ENST00000599362 IFT172Q9UG01 1749 aa27.63■■■□□ 2.01
SNRPA-206ENST00000599362 ASXL1Q8IXJ9 1541 aa27.62■■■□□ 2.01
SNRPA-206ENST00000599362 SPATA31A6Q5VVP1 1343 aa27.57■■■□□ 2
SNRPA-206ENST00000599362 PIK3C2GO75747 1445 aa27.56■■■□□ 2
SNRPA-206ENST00000599362 NHSL1Q5SYE7 1610 aa27.56■■■□□ 2
SNRPA-206ENST00000599362 SHPRHQ149N8 1683 aa27.56■■■□□ 2
SNRPA-206ENST00000599362 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
SNRPA-206ENST00000599362 TECPR2O15040 1411 aa27.53■■■□□ 2
SNRPA-206ENST00000599362 HRCP23327 699 aa27.52■■■□□ 2
SNRPA-206ENST00000599362 LRP6O75581 1613 aa27.52■■■□□ 2
SNRPA-206ENST00000599362 LRPPRCP42704 1394 aaKnown RBP27.51■■□□□ 1.99
SNRPA-206ENST00000599362 POTEAQ6S8J7 498 aa27.5■■□□□ 1.99
SNRPA-206ENST00000599362 NRXN1Q9ULB1 1477 aa27.5■■□□□ 1.99
SNRPA-206ENST00000599362 ABCC11Q96J66 1382 aa27.49■■□□□ 1.99
SNRPA-206ENST00000599362 MYOM2P54296 1465 aa27.48■■□□□ 1.99
SNRPA-206ENST00000599362 LAMC1P11047 1609 aa27.47■■□□□ 1.99
SNRPA-206ENST00000599362 C14orf93Q9H972 538 aaKnown RBP27.46■■□□□ 1.99
SNRPA-206ENST00000599362 KNDC1Q76NI1 1749 aa27.46■■□□□ 1.99
SNRPA-206ENST00000599362 CDC42BPGQ6DT37 1551 aa27.45■■□□□ 1.99
SNRPA-206ENST00000599362 TMEM132EQ6IEE7 984 aa27.45■■□□□ 1.98
SNRPA-206ENST00000599362 DDX17Q92841 729 aaKnown RBP27.45■■□□□ 1.98
SNRPA-206ENST00000599362 LRRC59Q96AG4 307 aaKnown RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms