RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TMEM94Q12767 1356 aa22.74■■□□□ 1.23
IRF3-223ENST00000599223 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
IRF3-223ENST00000599223 ROCK1Q13464 1354 aa22.72■■□□□ 1.23
IRF3-223ENST00000599223 SLC52A1Q9NWF4 448 aa22.71■■□□□ 1.23
IRF3-223ENST00000599223 ROBO1Q9Y6N7 1651 aa22.7■■□□□ 1.22
IRF3-223ENST00000599223 CHD2O14647 1828 aaKnown RBP22.7■■□□□ 1.22
IRF3-223ENST00000599223 RBM33Q96EV2 1170 aaKnown RBP22.69■■□□□ 1.22
IRF3-223ENST00000599223 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
IRF3-223ENST00000599223 KCNA6P17658 529 aa22.68■■□□□ 1.22
IRF3-223ENST00000599223 PLEKHG1Q9ULL1 1385 aa22.66■■□□□ 1.22
IRF3-223ENST00000599223 FAM135BQ49AJ0 1406 aa22.64■■□□□ 1.21
IRF3-223ENST00000599223 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
IRF3-223ENST00000599223 SPHKAPQ2M3C7 1700 aa22.61■■□□□ 1.21
IRF3-223ENST00000599223 ADAMTS13Q76LX8 1427 aa22.61■■□□□ 1.21
IRF3-223ENST00000599223 PROSER2Q86WR7 435 aaPredicted RBP22.61■■□□□ 1.21
IRF3-223ENST00000599223 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
IRF3-223ENST00000599223 ITGAEP38570 1179 aa22.59■■□□□ 1.21
IRF3-223ENST00000599223 DIP2AQ14689 1571 aa22.59■■□□□ 1.21
IRF3-223ENST00000599223 BCANQ96GW7 911 aa22.58■■□□□ 1.21
IRF3-223ENST00000599223 NUP155O75694 1391 aa22.58■■□□□ 1.21
IRF3-223ENST00000599223 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
IRF3-223ENST00000599223 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
IRF3-223ENST00000599223 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
IRF3-223ENST00000599223 MSH6P52701 1360 aa22.55■■□□□ 1.2
IRF3-223ENST00000599223 PHLPP1O60346 1717 aa22.55■■□□□ 1.2
IRF3-223ENST00000599223 CHGAP10645 457 aaKnown RBP22.55■■□□□ 1.2
IRF3-223ENST00000599223 RGS17Q9UGC6 210 aaPredicted RBP22.54■■□□□ 1.2
IRF3-223ENST00000599223 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.52■■□□□ 1.2
IRF3-223ENST00000599223 COL16A1Q07092 1604 aaPredicted RBP22.52■■□□□ 1.2
IRF3-223ENST00000599223 CLTCL1P53675 1640 aa22.51■■□□□ 1.19
IRF3-223ENST00000599223 TRPM2O94759 1503 aa22.51■■□□□ 1.19
IRF3-223ENST00000599223 XRN1Q8IZH2 1706 aaKnown RBP22.51■■□□□ 1.19
IRF3-223ENST00000599223 TBX22Q9Y458 520 aa22.5■■□□□ 1.19
IRF3-223ENST00000599223 PTPRUQ92729 1446 aa22.49■■□□□ 1.19
IRF3-223ENST00000599223 RRBP1Q9P2E9 1410 aaKnown RBP22.49■■□□□ 1.19
IRF3-223ENST00000599223 SETBP1Q9Y6X0 1596 aa22.49■■□□□ 1.19
IRF3-223ENST00000599223 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.48■■□□□ 1.19
IRF3-223ENST00000599223 HDGFP51858 240 aaKnown RBP22.46■■□□□ 1.19
IRF3-223ENST00000599223 SLAIN2Q9P270 581 aa22.46■■□□□ 1.19
IRF3-223ENST00000599223 PIK3R4Q99570 1358 aa22.46■■□□□ 1.19
IRF3-223ENST00000599223 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
IRF3-223ENST00000599223 NAIPQ13075 1403 aa22.44■■□□□ 1.18
IRF3-223ENST00000599223 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
IRF3-223ENST00000599223 AHDC1Q5TGY3 1603 aaPredicted RBP22.42■■□□□ 1.18
IRF3-223ENST00000599223 KIF1BO60333 1816 aa22.4■■□□□ 1.18
IRF3-223ENST00000599223 LRP6O75581 1613 aa22.39■■□□□ 1.18
IRF3-223ENST00000599223 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.17
IRF3-223ENST00000599223 POTEAQ6S8J7 498 aa22.38■■□□□ 1.17
IRF3-223ENST00000599223 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
IRF3-223ENST00000599223 JCADQ9P266 1359 aa22.38■■□□□ 1.17
IRF3-223ENST00000599223 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
IRF3-223ENST00000599223 SHPRHQ149N8 1683 aa22.37■■□□□ 1.17
IRF3-223ENST00000599223 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
IRF3-223ENST00000599223 METP08581 1390 aa22.37■■□□□ 1.17
IRF3-223ENST00000599223 DCCP43146 1447 aa22.34■■□□□ 1.17
IRF3-223ENST00000599223 C19orf44Q9H6X5 657 aa22.34■■□□□ 1.17
IRF3-223ENST00000599223 HFM1A2PYH4 1435 aa22.33■■□□□ 1.17
IRF3-223ENST00000599223 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
IRF3-223ENST00000599223 NHSL1Q5SYE7 1610 aa22.33■■□□□ 1.17
IRF3-223ENST00000599223 CADPS2Q86UW7 1296 aa22.33■■□□□ 1.17
IRF3-223ENST00000599223 ZNF326Q5BKZ1 582 aaKnown RBP22.32■■□□□ 1.16
IRF3-223ENST00000599223 ATF3P18847 181 aa22.31■■□□□ 1.16
IRF3-223ENST00000599223 MST1RQ04912 1400 aa22.31■■□□□ 1.16
IRF3-223ENST00000599223 BRINP3Q76B58 766 aa22.29■■□□□ 1.16
IRF3-223ENST00000599223 PPLO60437 1756 aa22.29■■□□□ 1.16
IRF3-223ENST00000599223 ADGRL3Q9HAR2 1447 aa22.28■■□□□ 1.16
IRF3-223ENST00000599223 SPATA31A6Q5VVP1 1343 aa22.24■■□□□ 1.15
IRF3-223ENST00000599223 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
IRF3-223ENST00000599223 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
IRF3-223ENST00000599223 PRAG1Q86YV5 1406 aa22.2■■□□□ 1.14
IRF3-223ENST00000599223 SETD5Q9C0A6 1442 aa22.2■■□□□ 1.14
IRF3-223ENST00000599223 ROBO2Q9HCK4 1378 aa22.19■■□□□ 1.14
IRF3-223ENST00000599223 IFT172Q9UG01 1749 aa22.18■■□□□ 1.14
IRF3-223ENST00000599223 LAMC1P11047 1609 aa22.18■■□□□ 1.14
IRF3-223ENST00000599223 DDX17Q92841 729 aaKnown RBP22.17■■□□□ 1.14
IRF3-223ENST00000599223 SLC4A1APQ9BWU0 796 aaKnown RBP22.17■■□□□ 1.14
IRF3-223ENST00000599223 C1orf167Q5SNV9 1468 aa22.15■■□□□ 1.14
IRF3-223ENST00000599223 FOXD1Q16676 465 aa22.15■■□□□ 1.14
IRF3-223ENST00000599223 MEX3CQ5U5Q3 659 aaKnown RBP22.15■■□□□ 1.14
IRF3-223ENST00000599223 PNPLA6Q8IY17 1366 aa22.12■■□□□ 1.13
IRF3-223ENST00000599223 NUTM2BA6NNL0 878 aaPredicted RBP22.12■■□□□ 1.13
IRF3-223ENST00000599223 NUTM2EB1AL46 878 aaPredicted RBP22.12■■□□□ 1.13
IRF3-223ENST00000599223 NUTM2AQ8IVF1 878 aaPredicted RBP22.12■■□□□ 1.13
IRF3-223ENST00000599223 VGFO15240 615 aaPredicted RBP22.11■■□□□ 1.13
IRF3-223ENST00000599223 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
IRF3-223ENST00000599223 RPGRIP1LQ68CZ1 1315 aa22.09■■□□□ 1.13
IRF3-223ENST00000599223 CDC42BPGQ6DT37 1551 aa22.09■■□□□ 1.13
IRF3-223ENST00000599223 ZNF772Q68DY9 489 aaPredicted RBP22.08■■□□□ 1.13
IRF3-223ENST00000599223 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
IRF3-223ENST00000599223 KNDC1Q76NI1 1749 aa22.07■■□□□ 1.12
IRF3-223ENST00000599223 AFF2P51816 1311 aa22.06■■□□□ 1.12
IRF3-223ENST00000599223 ADGRF5Q8IZF2 1346 aa22.06■■□□□ 1.12
IRF3-223ENST00000599223 LRRC59Q96AG4 307 aaKnown RBP22.04■■□□□ 1.12
IRF3-223ENST00000599223 ORAI2Q96SN7 254 aa22.04■■□□□ 1.12
IRF3-223ENST00000599223 TECPR2O15040 1411 aa22.03■■□□□ 1.12
IRF3-223ENST00000599223 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
IRF3-223ENST00000599223 COL22A1Q8NFW1 1626 aaPredicted RBP22.02■■□□□ 1.12
IRF3-223ENST00000599223 PIK3C2GO75747 1445 aa22.02■■□□□ 1.12
IRF3-223ENST00000599223 SOS2Q07890 1332 aaPredicted RBP22.01■■□□□ 1.11
IRF3-223ENST00000599223 MPHOSPH9Q99550 1183 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms