RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 REPIN1Q9BWE0 567 aaKnown RBP12.09□□□□□ -0.47
FARP1-223ENST00000598346 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
FARP1-223ENST00000598346 DAXXQ9UER7 740 aaPredicted RBP12.09□□□□□ -0.47
FARP1-223ENST00000598346 FAM198AQ9UFP1 575 aa12.09□□□□□ -0.47
FARP1-223ENST00000598346 GIGYF2Q6Y7W6 1299 aaKnown RBP12.08□□□□□ -0.48
FARP1-223ENST00000598346 CLCN1P35523 988 aa12.07□□□□□ -0.48
FARP1-223ENST00000598346 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
FARP1-223ENST00000598346 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
FARP1-223ENST00000598346 TSKSQ9UJT2 592 aa12.07□□□□□ -0.48
FARP1-223ENST00000598346 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
FARP1-223ENST00000598346 NLRP7Q8WX94 980 aa12.05□□□□□ -0.48
FARP1-223ENST00000598346 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
FARP1-223ENST00000598346 BCAMP50895 628 aa12.04□□□□□ -0.48
FARP1-223ENST00000598346 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
FARP1-223ENST00000598346 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
FARP1-223ENST00000598346 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
FARP1-223ENST00000598346 MS4A1P11836 297 aa12.03□□□□□ -0.48
FARP1-223ENST00000598346 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
FARP1-223ENST00000598346 EYA1Q99502 592 aa12.02□□□□□ -0.49
FARP1-223ENST00000598346 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
FARP1-223ENST00000598346 A0A0G2JS52 829 aa12.01□□□□□ -0.49
FARP1-223ENST00000598346 C3orf80F5H4A9 247 aa12.01□□□□□ -0.49
FARP1-223ENST00000598346 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
FARP1-223ENST00000598346 NUDT18Q6ZVK8 323 aa12□□□□□ -0.49
FARP1-223ENST00000598346 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
FARP1-223ENST00000598346 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
FARP1-223ENST00000598346 SSTR3P32745 418 aaPredicted RBP11.98□□□□□ -0.49
FARP1-223ENST00000598346 TATDN2Q93075 761 aa11.98□□□□□ -0.49
FARP1-223ENST00000598346 WBP1LQ9NX94 342 aa11.98□□□□□ -0.49
FARP1-223ENST00000598346 PNMA3Q9UL41 463 aa11.98□□□□□ -0.49
FARP1-223ENST00000598346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
FARP1-223ENST00000598346 RCCD1A6NED2 376 aa11.97□□□□□ -0.49
FARP1-223ENST00000598346 FAM217BQ9NTX9 383 aaPredicted RBP11.97□□□□□ -0.49
FARP1-223ENST00000598346 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
FARP1-223ENST00000598346 KCNC4Q03721 635 aa11.94□□□□□ -0.5
FARP1-223ENST00000598346 SMAPO00193 183 aa11.93□□□□□ -0.5
FARP1-223ENST00000598346 DNAJB2P25686 324 aa11.93□□□□□ -0.5
FARP1-223ENST00000598346 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
FARP1-223ENST00000598346 PPP4CP60510 307 aa11.92□□□□□ -0.5
FARP1-223ENST00000598346 BEGAINQ9BUH8 593 aa11.92□□□□□ -0.5
FARP1-223ENST00000598346 TMEM134Q9H6X4 195 aa11.9□□□□□ -0.5
FARP1-223ENST00000598346 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
FARP1-223ENST00000598346 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
FARP1-223ENST00000598346 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
FARP1-223ENST00000598346 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
FARP1-223ENST00000598346 SULF1Q8IWU6 871 aa11.85□□□□□ -0.51
FARP1-223ENST00000598346 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
FARP1-223ENST00000598346 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
FARP1-223ENST00000598346 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
FARP1-223ENST00000598346 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.52
FARP1-223ENST00000598346 CD46P15529 392 aa11.83□□□□□ -0.52
FARP1-223ENST00000598346 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
FARP1-223ENST00000598346 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
FARP1-223ENST00000598346 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
FARP1-223ENST00000598346 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
FARP1-223ENST00000598346 TBC1D2Q9BYX2 928 aa11.8□□□□□ -0.52
FARP1-223ENST00000598346 SWT1Q5T5J6 900 aaKnown RBP11.79□□□□□ -0.52
FARP1-223ENST00000598346 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
FARP1-223ENST00000598346 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
FARP1-223ENST00000598346 RNF40O75150 1001 aa11.77□□□□□ -0.53
FARP1-223ENST00000598346 DIXDC1Q155Q3 683 aa11.77□□□□□ -0.53
FARP1-223ENST00000598346 C14orf37Q86TY3 774 aa11.77□□□□□ -0.53
FARP1-223ENST00000598346 RDH13Q8NBN7 331 aa11.77□□□□□ -0.53
FARP1-223ENST00000598346 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
FARP1-223ENST00000598346 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
FARP1-223ENST00000598346 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
FARP1-223ENST00000598346 IL21Q9HBE4 155 aa11.76□□□□□ -0.53
FARP1-223ENST00000598346 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
FARP1-223ENST00000598346 SLC10A3P09131 477 aa11.73□□□□□ -0.53
FARP1-223ENST00000598346 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
FARP1-223ENST00000598346 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
FARP1-223ENST00000598346 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
FARP1-223ENST00000598346 MTRQ99707 1265 aa11.73□□□□□ -0.53
FARP1-223ENST00000598346 PRR14Q9BWN1 585 aa11.72□□□□□ -0.53
FARP1-223ENST00000598346 GCGRP47871 477 aa11.71□□□□□ -0.53
FARP1-223ENST00000598346 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
FARP1-223ENST00000598346 ATP1B4Q9UN42 357 aaPredicted RBP11.71□□□□□ -0.53
FARP1-223ENST00000598346 KDM4AO75164 1064 aa11.7□□□□□ -0.54
FARP1-223ENST00000598346 LIMD1Q9UGP4 676 aa11.7□□□□□ -0.54
FARP1-223ENST00000598346 APLP1P51693 650 aa11.69□□□□□ -0.54
FARP1-223ENST00000598346 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
FARP1-223ENST00000598346 MOXD2PA6NHM9 499 aa11.68□□□□□ -0.54
FARP1-223ENST00000598346 SPTLC1O15269 473 aa11.67□□□□□ -0.54
FARP1-223ENST00000598346 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
FARP1-223ENST00000598346 NDUFV2P19404 249 aa11.66□□□□□ -0.54
FARP1-223ENST00000598346 LAPTM4AQ15012 233 aa11.66□□□□□ -0.54
FARP1-223ENST00000598346 GJA5P36382 358 aa11.65□□□□□ -0.54
FARP1-223ENST00000598346 USP46P62068 366 aa11.65□□□□□ -0.54
FARP1-223ENST00000598346 HOXA2O43364 376 aa11.64□□□□□ -0.55
FARP1-223ENST00000598346 GGCXP38435 758 aa11.64□□□□□ -0.55
FARP1-223ENST00000598346 TUSC1Q2TAM9 212 aa11.64□□□□□ -0.55
FARP1-223ENST00000598346 CFHP08603 1231 aa11.63□□□□□ -0.55
FARP1-223ENST00000598346 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
FARP1-223ENST00000598346 FBXO31Q5XUX0 539 aaPredicted RBP11.62□□□□□ -0.55
FARP1-223ENST00000598346 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
FARP1-223ENST00000598346 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.62□□□□□ -0.55
FARP1-223ENST00000598346 FLIIQ13045 1269 aa11.61□□□□□ -0.55
FARP1-223ENST00000598346 CSPP1Q1MSJ5 1256 aa11.61□□□□□ -0.55
FARP1-223ENST00000598346 FUT2Q10981 343 aa11.6□□□□□ -0.55
FARP1-223ENST00000598346 PPP2R2DQ66LE6 453 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms