RNA–Protein interactions for RNA: ENST00000597743.5

CALM3-209, Transcript of calmodulin 3, humanhuman

TSL 4 BASIC

Gene CALM3, Length 577 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-209ENST00000597743 PHF23Q9BUL5 403 aaPredicted RBP38.96■■■■□ 3.83
CALM3-209ENST00000597743 TET3O43151 1660 aa38.96■■■■□ 3.83
CALM3-209ENST00000597743 GCC2Q8IWJ2 1684 aa38.96■■■■□ 3.83
CALM3-209ENST00000597743 HDGFP51858 240 aaKnown RBP38.95■■■■□ 3.83
CALM3-209ENST00000597743 XIRP1Q702N8 1843 aaKnown RBP38.94■■■■□ 3.82
CALM3-209ENST00000597743 PROSER2Q86WR7 435 aaPredicted RBP38.91■■■■□ 3.82
CALM3-209ENST00000597743 TMEM94Q12767 1356 aa38.91■■■■□ 3.82
CALM3-209ENST00000597743 NUP155O75694 1391 aa38.88■■■■□ 3.81
CALM3-209ENST00000597743 PPP1R15AO75807 674 aaPredicted RBP38.87■■■■□ 3.81
CALM3-209ENST00000597743 FAM135BQ49AJ0 1406 aa38.82■■■■□ 3.81
CALM3-209ENST00000597743 NKTRP30414 1462 aaKnown RBP38.81■■■■□ 3.8
CALM3-209ENST00000597743 CHGAP10645 457 aaKnown RBP38.81■■■■□ 3.8
CALM3-209ENST00000597743 PLEKHG1Q9ULL1 1385 aa38.81■■■■□ 3.8
CALM3-209ENST00000597743 ZFYVE9O95405 1425 aa38.8■■■■□ 3.8
CALM3-209ENST00000597743 RIMS2Q9UQ26 1411 aa38.8■■■■□ 3.8
CALM3-209ENST00000597743 MYO5BQ9ULV0 1848 aa38.8■■■■□ 3.8
CALM3-209ENST00000597743 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.8■■■■□ 3.8
CALM3-209ENST00000597743 IQGAP3Q86VI3 1631 aa38.8■■■■□ 3.8
CALM3-209ENST00000597743 TMEM131LA2VDJ0 1609 aa38.78■■■■□ 3.8
CALM3-209ENST00000597743 NWD1Q149M9 1564 aa38.77■■■■□ 3.8
CALM3-209ENST00000597743 RBM33Q96EV2 1170 aaKnown RBP38.76■■■■□ 3.8
CALM3-209ENST00000597743 SETD5Q9C0A6 1442 aa38.76■■■■□ 3.8
CALM3-209ENST00000597743 E9PCH4 1651 aa38.74■■■■□ 3.79
CALM3-209ENST00000597743 MSH6P52701 1360 aa38.73■■■■□ 3.79
CALM3-209ENST00000597743 TRIM52Q96A61 297 aa38.72■■■■□ 3.79
CALM3-209ENST00000597743 TBX22Q9Y458 520 aa38.7■■■■□ 3.79
CALM3-209ENST00000597743 CHD2O14647 1828 aaKnown RBP38.67■■■■□ 3.78
CALM3-209ENST00000597743 ROBO1Q9Y6N7 1651 aa38.65■■■■□ 3.78
CALM3-209ENST00000597743 ACIN1Q9UKV3 1341 aaKnown RBP38.63■■■■□ 3.78
CALM3-209ENST00000597743 RAB3GAP2Q9H2M9 1393 aa38.62■■■■□ 3.77
CALM3-209ENST00000597743 NUTM2DQ5VT03 806 aaPredicted RBP38.62■■■■□ 3.77
CALM3-209ENST00000597743 SLAIN2Q9P270 581 aa38.62■■■■□ 3.77
CALM3-209ENST00000597743 C14orf37Q86TY3 774 aa38.58■■■■□ 3.77
CALM3-209ENST00000597743 NCOA3Q9Y6Q9 1424 aa38.56■■■■□ 3.76
CALM3-209ENST00000597743 SLC4A1APQ9BWU0 796 aaKnown RBP38.56■■■■□ 3.76
CALM3-209ENST00000597743 DIP2AQ14689 1571 aa38.56■■■■□ 3.76
CALM3-209ENST00000597743 PIK3R4Q99570 1358 aa38.56■■■■□ 3.76
CALM3-209ENST00000597743 ADAMTS13Q76LX8 1427 aa38.54■■■■□ 3.76
CALM3-209ENST00000597743 HRCP23327 699 aa38.52■■■■□ 3.76
CALM3-209ENST00000597743 TRIM26Q12899 539 aaPredicted RBP38.52■■■■□ 3.76
CALM3-209ENST00000597743 RGS17Q9UGC6 210 aaPredicted RBP38.49■■■■□ 3.75
CALM3-209ENST00000597743 MPHOSPH9Q99550 1183 aa38.47■■■■□ 3.75
CALM3-209ENST00000597743 C19orf44Q9H6X5 657 aa38.46■■■■□ 3.75
CALM3-209ENST00000597743 TRPM2O94759 1503 aa38.46■■■■□ 3.75
CALM3-209ENST00000597743 CADPS2Q86UW7 1296 aa38.45■■■■□ 3.75
CALM3-209ENST00000597743 PHLPP1O60346 1717 aa38.44■■■■□ 3.74
CALM3-209ENST00000597743 SPHKAPQ2M3C7 1700 aa38.44■■■■□ 3.74
CALM3-209ENST00000597743 ATF3P18847 181 aa38.44■■■■□ 3.74
CALM3-209ENST00000597743 ZNF326Q5BKZ1 582 aaKnown RBP38.44■■■■□ 3.74
CALM3-209ENST00000597743 AMOTL2Q9Y2J4 779 aa38.43■■■■□ 3.74
CALM3-209ENST00000597743 JCADQ9P266 1359 aa38.4■■■■□ 3.74
CALM3-209ENST00000597743 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.36■■■■□ 3.73
CALM3-209ENST00000597743 FOXD1Q16676 465 aa38.34■■■■□ 3.73
CALM3-209ENST00000597743 PTPRUQ92729 1446 aa38.32■■■■□ 3.73
CALM3-209ENST00000597743 SETBP1Q9Y6X0 1596 aa38.31■■■■□ 3.72
CALM3-209ENST00000597743 POTEAQ6S8J7 498 aa38.29■■■■□ 3.72
CALM3-209ENST00000597743 COL16A1Q07092 1604 aaPredicted RBP38.27■■■■□ 3.72
CALM3-209ENST00000597743 NRXN3Q9Y4C0 1643 aa38.26■■■■□ 3.71
CALM3-209ENST00000597743 DCCP43146 1447 aa38.24■■■■□ 3.71
CALM3-209ENST00000597743 CLTCL1P53675 1640 aa38.23■■■■□ 3.71
CALM3-209ENST00000597743 SPATA31A6Q5VVP1 1343 aa38.23■■■■□ 3.71
CALM3-209ENST00000597743 XRN1Q8IZH2 1706 aaKnown RBP38.22■■■■□ 3.71
CALM3-209ENST00000597743 KIF1BO60333 1816 aa38.22■■■■□ 3.71
CALM3-209ENST00000597743 AHDC1Q5TGY3 1603 aaPredicted RBP38.21■■■■□ 3.71
CALM3-209ENST00000597743 METP08581 1390 aa38.19■■■■□ 3.7
CALM3-209ENST00000597743 BRINP3Q76B58 766 aa38.19■■■■□ 3.7
CALM3-209ENST00000597743 MEX3CQ5U5Q3 659 aaKnown RBP38.18■■■■□ 3.7
CALM3-209ENST00000597743 NEXMIFQ5QGS0 1516 aa38.17■■■■□ 3.7
CALM3-209ENST00000597743 VGFO15240 615 aaPredicted RBP38.14■■■■□ 3.7
CALM3-209ENST00000597743 CCDC144AA2RUR9 1427 aa38.12■■■■□ 3.69
CALM3-209ENST00000597743 SHPRHQ149N8 1683 aa38.09■■■■□ 3.69
CALM3-209ENST00000597743 MST1RQ04912 1400 aa38.07■■■■□ 3.69
CALM3-209ENST00000597743 ADGRL3Q9HAR2 1447 aa38.07■■■■□ 3.69
CALM3-209ENST00000597743 ZNF772Q68DY9 489 aaPredicted RBP38.07■■■■□ 3.68
CALM3-209ENST00000597743 RPGRIP1LQ68CZ1 1315 aa38.07■■■■□ 3.68
CALM3-209ENST00000597743 ASXL1Q8IXJ9 1541 aa38.07■■■■□ 3.68
CALM3-209ENST00000597743 ANKRD30BQ9BXX2 1392 aa38.06■■■■□ 3.68
CALM3-209ENST00000597743 LRP6O75581 1613 aa38.05■■■■□ 3.68
CALM3-209ENST00000597743 LRRC59Q96AG4 307 aaKnown RBP38■■■■□ 3.67
CALM3-209ENST00000597743 NUTM2BA6NNL0 878 aaPredicted RBP37.99■■■■□ 3.67
CALM3-209ENST00000597743 NUTM2EB1AL46 878 aaPredicted RBP37.99■■■■□ 3.67
CALM3-209ENST00000597743 NUTM2AQ8IVF1 878 aaPredicted RBP37.99■■■■□ 3.67
CALM3-209ENST00000597743 PCGF6Q9BYE7 350 aa37.96■■■■□ 3.67
CALM3-209ENST00000597743 SPATA31E1Q6ZUB1 1445 aa37.95■■■■□ 3.67
CALM3-209ENST00000597743 NALCNQ8IZF0 1738 aa37.95■■■■□ 3.67
CALM3-209ENST00000597743 NHSL1Q5SYE7 1610 aa37.95■■■■□ 3.67
CALM3-209ENST00000597743 PTCH1Q13635 1447 aa37.95■■■■□ 3.67
CALM3-209ENST00000597743 ROBO2Q9HCK4 1378 aa37.89■■■■□ 3.66
CALM3-209ENST00000597743 SETD1AO15047 1707 aaKnown RBP37.89■■■■□ 3.66
CALM3-209ENST00000597743 PPLO60437 1756 aa37.88■■■■□ 3.66
CALM3-209ENST00000597743 RGL3Q3MIN7 710 aa37.88■■■■□ 3.65
CALM3-209ENST00000597743 DDX17Q92841 729 aaKnown RBP37.87■■■■□ 3.65
CALM3-209ENST00000597743 DHX57Q6P158 1386 aaKnown RBP37.87■■■■□ 3.65
CALM3-209ENST00000597743 C1orf167Q5SNV9 1468 aa37.87■■■■□ 3.65
CALM3-209ENST00000597743 RXRBP28702 533 aa37.85■■■■□ 3.65
CALM3-209ENST00000597743 PRAG1Q86YV5 1406 aa37.84■■■■□ 3.65
CALM3-209ENST00000597743 AFF2P51816 1311 aa37.82■■■■□ 3.64
CALM3-209ENST00000597743 PNPLA6Q8IY17 1366 aa37.8■■■■□ 3.64
CALM3-209ENST00000597743 ORAI2Q96SN7 254 aa37.77■■■■□ 3.64
CALM3-209ENST00000597743 C8orf37Q96NL8 207 aa37.76■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms