RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.11■■□□□ 1.93
CHMP2A-203ENST00000597209 ALKQ9UM73 1620 aa27.11■■□□□ 1.93
CHMP2A-203ENST00000597209 SLC26A8Q96RN1 970 aa27.1■■□□□ 1.93
CHMP2A-203ENST00000597209 CHGAP10645 457 aaKnown RBP27.09■■□□□ 1.93
CHMP2A-203ENST00000597209 PIP4K2BP78356 416 aa27.08■■□□□ 1.93
CHMP2A-203ENST00000597209 SPHKAPQ2M3C7 1700 aa27.07■■□□□ 1.92
CHMP2A-203ENST00000597209 PPP1R15AO75807 674 aaPredicted RBP27.06■■□□□ 1.92
CHMP2A-203ENST00000597209 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
CHMP2A-203ENST00000597209 XIRP1Q702N8 1843 aaKnown RBP27.06■■□□□ 1.92
CHMP2A-203ENST00000597209 BCANQ96GW7 911 aa27.05■■□□□ 1.92
CHMP2A-203ENST00000597209 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
CHMP2A-203ENST00000597209 TBX22Q9Y458 520 aa27.03■■□□□ 1.92
CHMP2A-203ENST00000597209 NKTRP30414 1462 aaKnown RBP27.02■■□□□ 1.92
CHMP2A-203ENST00000597209 HSPA1LP34931 641 aa27.01■■□□□ 1.91
CHMP2A-203ENST00000597209 TMEM94Q12767 1356 aa26.99■■□□□ 1.91
CHMP2A-203ENST00000597209 DISP3Q9P2K9 1392 aa26.99■■□□□ 1.91
CHMP2A-203ENST00000597209 TRPM2O94759 1503 aa26.99■■□□□ 1.91
CHMP2A-203ENST00000597209 CHD2O14647 1828 aaKnown RBP26.98■■□□□ 1.91
CHMP2A-203ENST00000597209 PROSER2Q86WR7 435 aaPredicted RBP26.98■■□□□ 1.91
CHMP2A-203ENST00000597209 ADAMTS13Q76LX8 1427 aa26.98■■□□□ 1.91
CHMP2A-203ENST00000597209 DIP2AQ14689 1571 aa26.97■■□□□ 1.91
CHMP2A-203ENST00000597209 TRIM52Q96A61 297 aa26.97■■□□□ 1.91
CHMP2A-203ENST00000597209 NUTM2DQ5VT03 806 aaPredicted RBP26.95■■□□□ 1.9
CHMP2A-203ENST00000597209 PIK3R4Q99570 1358 aa26.95■■□□□ 1.9
CHMP2A-203ENST00000597209 CLTCL1P53675 1640 aa26.94■■□□□ 1.9
CHMP2A-203ENST00000597209 SENP3Q9H4L4 574 aaPredicted RBP26.92■■□□□ 1.9
CHMP2A-203ENST00000597209 SLC4A1APQ9BWU0 796 aaKnown RBP26.91■■□□□ 1.9
CHMP2A-203ENST00000597209 ZNF326Q5BKZ1 582 aaKnown RBP26.89■■□□□ 1.9
CHMP2A-203ENST00000597209 NCOA3Q9Y6Q9 1424 aa26.89■■□□□ 1.89
CHMP2A-203ENST00000597209 FAM135BQ49AJ0 1406 aa26.88■■□□□ 1.89
CHMP2A-203ENST00000597209 KIF1BO60333 1816 aa26.88■■□□□ 1.89
CHMP2A-203ENST00000597209 SETBP1Q9Y6X0 1596 aa26.88■■□□□ 1.89
CHMP2A-203ENST00000597209 RBM33Q96EV2 1170 aaKnown RBP26.86■■□□□ 1.89
CHMP2A-203ENST00000597209 MSH6P52701 1360 aa26.85■■□□□ 1.89
CHMP2A-203ENST00000597209 ACIN1Q9UKV3 1341 aaKnown RBP26.85■■□□□ 1.89
CHMP2A-203ENST00000597209 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
CHMP2A-203ENST00000597209 NRXN3Q9Y4C0 1643 aa26.84■■□□□ 1.89
CHMP2A-203ENST00000597209 PTPRUQ92729 1446 aa26.8■■□□□ 1.88
CHMP2A-203ENST00000597209 AMOTL2Q9Y2J4 779 aa26.79■■□□□ 1.88
CHMP2A-203ENST00000597209 ILDR2Q71H61 639 aa26.78■■□□□ 1.88
CHMP2A-203ENST00000597209 RPGRIP1LQ68CZ1 1315 aa26.78■■□□□ 1.88
CHMP2A-203ENST00000597209 MED1Q15648 1581 aaPredicted RBP26.78■■□□□ 1.88
CHMP2A-203ENST00000597209 MPHOSPH9Q99550 1183 aa26.76■■□□□ 1.87
CHMP2A-203ENST00000597209 SLAIN2Q9P270 581 aa26.76■■□□□ 1.87
CHMP2A-203ENST00000597209 ROBO1Q9Y6N7 1651 aa26.76■■□□□ 1.87
CHMP2A-203ENST00000597209 SETD5Q9C0A6 1442 aa26.75■■□□□ 1.87
CHMP2A-203ENST00000597209 VGFO15240 615 aaPredicted RBP26.75■■□□□ 1.87
CHMP2A-203ENST00000597209 XRN1Q8IZH2 1706 aaKnown RBP26.75■■□□□ 1.87
CHMP2A-203ENST00000597209 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
CHMP2A-203ENST00000597209 METP08581 1390 aa26.72■■□□□ 1.87
CHMP2A-203ENST00000597209 FOXD1Q16676 465 aa26.72■■□□□ 1.87
CHMP2A-203ENST00000597209 C14orf37Q86TY3 774 aa26.71■■□□□ 1.87
CHMP2A-203ENST00000597209 CADPS2Q86UW7 1296 aa26.7■■□□□ 1.86
CHMP2A-203ENST00000597209 CCDC144AA2RUR9 1427 aa26.7■■□□□ 1.86
CHMP2A-203ENST00000597209 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.86
CHMP2A-203ENST00000597209 PPLO60437 1756 aa26.69■■□□□ 1.86
CHMP2A-203ENST00000597209 DCCP43146 1447 aa26.66■■□□□ 1.86
CHMP2A-203ENST00000597209 ATF3P18847 181 aa26.66■■□□□ 1.86
CHMP2A-203ENST00000597209 SETD1AO15047 1707 aaKnown RBP26.64■■□□□ 1.85
CHMP2A-203ENST00000597209 SPATA31E1Q6ZUB1 1445 aa26.64■■□□□ 1.85
CHMP2A-203ENST00000597209 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
CHMP2A-203ENST00000597209 SOCS7O14512 581 aa26.61■■□□□ 1.85
CHMP2A-203ENST00000597209 PRAG1Q86YV5 1406 aa26.6■■□□□ 1.85
CHMP2A-203ENST00000597209 PHLPP1O60346 1717 aa26.59■■□□□ 1.85
CHMP2A-203ENST00000597209 PTCH1Q13635 1447 aa26.58■■□□□ 1.85
CHMP2A-203ENST00000597209 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
CHMP2A-203ENST00000597209 ANKRD30BQ9BXX2 1392 aa26.58■■□□□ 1.84
CHMP2A-203ENST00000597209 ADGRL3Q9HAR2 1447 aa26.56■■□□□ 1.84
CHMP2A-203ENST00000597209 IFT172Q9UG01 1749 aa26.56■■□□□ 1.84
CHMP2A-203ENST00000597209 HRCP23327 699 aa26.56■■□□□ 1.84
CHMP2A-203ENST00000597209 RGL3Q3MIN7 710 aa26.56■■□□□ 1.84
CHMP2A-203ENST00000597209 ADGRF5Q8IZF2 1346 aa26.55■■□□□ 1.84
CHMP2A-203ENST00000597209 AHDC1Q5TGY3 1603 aaPredicted RBP26.54■■□□□ 1.84
CHMP2A-203ENST00000597209 COL16A1Q07092 1604 aaPredicted RBP26.54■■□□□ 1.84
CHMP2A-203ENST00000597209 JCADQ9P266 1359 aa26.53■■□□□ 1.84
CHMP2A-203ENST00000597209 MST1RQ04912 1400 aa26.53■■□□□ 1.84
CHMP2A-203ENST00000597209 BRINP3Q76B58 766 aa26.52■■□□□ 1.84
CHMP2A-203ENST00000597209 NALCNQ8IZF0 1738 aa26.51■■□□□ 1.83
CHMP2A-203ENST00000597209 ROBO2Q9HCK4 1378 aa26.51■■□□□ 1.83
CHMP2A-203ENST00000597209 PIK3C2GO75747 1445 aa26.47■■□□□ 1.83
CHMP2A-203ENST00000597209 ASXL1Q8IXJ9 1541 aa26.46■■□□□ 1.83
CHMP2A-203ENST00000597209 RGS17Q9UGC6 210 aaPredicted RBP26.44■■□□□ 1.82
CHMP2A-203ENST00000597209 TECPR2O15040 1411 aa26.43■■□□□ 1.82
CHMP2A-203ENST00000597209 NRXN1Q9ULB1 1477 aa26.42■■□□□ 1.82
CHMP2A-203ENST00000597209 LRPPRCP42704 1394 aaKnown RBP26.42■■□□□ 1.82
CHMP2A-203ENST00000597209 NHSL1Q5SYE7 1610 aa26.42■■□□□ 1.82
CHMP2A-203ENST00000597209 MYOM2P54296 1465 aa26.42■■□□□ 1.82
CHMP2A-203ENST00000597209 SPATA31A6Q5VVP1 1343 aa26.41■■□□□ 1.82
CHMP2A-203ENST00000597209 ABCC11Q96J66 1382 aa26.41■■□□□ 1.82
CHMP2A-203ENST00000597209 C1orf167Q5SNV9 1468 aa26.41■■□□□ 1.82
CHMP2A-203ENST00000597209 SHPRHQ149N8 1683 aa26.41■■□□□ 1.82
CHMP2A-203ENST00000597209 C14orf93Q9H972 538 aaKnown RBP26.39■■□□□ 1.82
CHMP2A-203ENST00000597209 KNDC1Q76NI1 1749 aa26.38■■□□□ 1.81
CHMP2A-203ENST00000597209 TMEM132EQ6IEE7 984 aa26.36■■□□□ 1.81
CHMP2A-203ENST00000597209 CDC42BPGQ6DT37 1551 aa26.35■■□□□ 1.81
CHMP2A-203ENST00000597209 SIRT1Q96EB6 747 aa26.35■■□□□ 1.81
CHMP2A-203ENST00000597209 STK26Q9P289 416 aa26.35■■□□□ 1.81
CHMP2A-203ENST00000597209 LAMC1P11047 1609 aa26.35■■□□□ 1.81
CHMP2A-203ENST00000597209 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
CHMP2A-203ENST00000597209 LRRC59Q96AG4 307 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms