RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 HSPA1LP34931 641 aa23.55■■□□□ 1.36
PPFIA4-208ENST00000597023 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
PPFIA4-208ENST00000597023 NAIPQ13075 1403 aa23.55■■□□□ 1.36
PPFIA4-208ENST00000597023 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
PPFIA4-208ENST00000597023 ZFYVE9O95405 1425 aa23.53■■□□□ 1.36
PPFIA4-208ENST00000597023 KCNA6P17658 529 aa23.52■■□□□ 1.36
PPFIA4-208ENST00000597023 TRIM52Q96A61 297 aa23.52■■□□□ 1.36
PPFIA4-208ENST00000597023 TMEM131LA2VDJ0 1609 aa23.51■■□□□ 1.35
PPFIA4-208ENST00000597023 HDGFP51858 240 aaKnown RBP23.51■■□□□ 1.35
PPFIA4-208ENST00000597023 MYO5BQ9ULV0 1848 aa23.5■■□□□ 1.35
PPFIA4-208ENST00000597023 ALKQ9UM73 1620 aa23.5■■□□□ 1.35
PPFIA4-208ENST00000597023 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
PPFIA4-208ENST00000597023 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.48■■□□□ 1.35
PPFIA4-208ENST00000597023 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
PPFIA4-208ENST00000597023 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
PPFIA4-208ENST00000597023 HFM1A2PYH4 1435 aa23.44■■□□□ 1.34
PPFIA4-208ENST00000597023 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
PPFIA4-208ENST00000597023 ILDR2Q71H61 639 aa23.42■■□□□ 1.34
PPFIA4-208ENST00000597023 TBX22Q9Y458 520 aa23.41■■□□□ 1.34
PPFIA4-208ENST00000597023 SLC4A1APQ9BWU0 796 aaKnown RBP23.4■■□□□ 1.34
PPFIA4-208ENST00000597023 XIRP1Q702N8 1843 aaKnown RBP23.38■■□□□ 1.33
PPFIA4-208ENST00000597023 ADAMTS13Q76LX8 1427 aa23.38■■□□□ 1.33
PPFIA4-208ENST00000597023 SPHKAPQ2M3C7 1700 aa23.37■■□□□ 1.33
PPFIA4-208ENST00000597023 FOXD1Q16676 465 aa23.36■■□□□ 1.33
PPFIA4-208ENST00000597023 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
PPFIA4-208ENST00000597023 NKTRP30414 1462 aaKnown RBP23.34■■□□□ 1.33
PPFIA4-208ENST00000597023 CLTCL1P53675 1640 aa23.33■■□□□ 1.32
PPFIA4-208ENST00000597023 AMOTL2Q9Y2J4 779 aa23.31■■□□□ 1.32
PPFIA4-208ENST00000597023 TRPM2O94759 1503 aa23.31■■□□□ 1.32
PPFIA4-208ENST00000597023 MSH6P52701 1360 aa23.3■■□□□ 1.32
PPFIA4-208ENST00000597023 C14orf37Q86TY3 774 aa23.3■■□□□ 1.32
PPFIA4-208ENST00000597023 PTPRUQ92729 1446 aa23.29■■□□□ 1.32
PPFIA4-208ENST00000597023 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
PPFIA4-208ENST00000597023 FAM135BQ49AJ0 1406 aa23.26■■□□□ 1.31
PPFIA4-208ENST00000597023 MPHOSPH9Q99550 1183 aa23.25■■□□□ 1.31
PPFIA4-208ENST00000597023 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
PPFIA4-208ENST00000597023 DIP2AQ14689 1571 aa23.25■■□□□ 1.31
PPFIA4-208ENST00000597023 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
PPFIA4-208ENST00000597023 METP08581 1390 aa23.24■■□□□ 1.31
PPFIA4-208ENST00000597023 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
PPFIA4-208ENST00000597023 NEXMIFQ5QGS0 1516 aa23.23■■□□□ 1.31
PPFIA4-208ENST00000597023 NRXN3Q9Y4C0 1643 aa23.22■■□□□ 1.31
PPFIA4-208ENST00000597023 SETBP1Q9Y6X0 1596 aa23.2■■□□□ 1.3
PPFIA4-208ENST00000597023 VGFO15240 615 aaPredicted RBP23.19■■□□□ 1.3
PPFIA4-208ENST00000597023 C19orf44Q9H6X5 657 aa23.19■■□□□ 1.3
PPFIA4-208ENST00000597023 SETD5Q9C0A6 1442 aa23.18■■□□□ 1.3
PPFIA4-208ENST00000597023 KIF1BO60333 1816 aa23.18■■□□□ 1.3
PPFIA4-208ENST00000597023 ATF3P18847 181 aa23.18■■□□□ 1.3
PPFIA4-208ENST00000597023 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
PPFIA4-208ENST00000597023 PHF23Q9BUL5 403 aaPredicted RBP23.18■■□□□ 1.3
PPFIA4-208ENST00000597023 ROBO1Q9Y6N7 1651 aa23.18■■□□□ 1.3
PPFIA4-208ENST00000597023 NCOA3Q9Y6Q9 1424 aa23.17■■□□□ 1.3
PPFIA4-208ENST00000597023 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
PPFIA4-208ENST00000597023 CADPS2Q86UW7 1296 aa23.15■■□□□ 1.3
PPFIA4-208ENST00000597023 CCDC144AA2RUR9 1427 aa23.14■■□□□ 1.29
PPFIA4-208ENST00000597023 SOCS7O14512 581 aa23.13■■□□□ 1.29
PPFIA4-208ENST00000597023 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
PPFIA4-208ENST00000597023 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
PPFIA4-208ENST00000597023 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.11■■□□□ 1.29
PPFIA4-208ENST00000597023 ADGRF5Q8IZF2 1346 aa23.09■■□□□ 1.29
PPFIA4-208ENST00000597023 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
PPFIA4-208ENST00000597023 SPATA31E1Q6ZUB1 1445 aa23.06■■□□□ 1.28
PPFIA4-208ENST00000597023 ROBO2Q9HCK4 1378 aa23.04■■□□□ 1.28
PPFIA4-208ENST00000597023 RGS17Q9UGC6 210 aaPredicted RBP23.04■■□□□ 1.28
PPFIA4-208ENST00000597023 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
PPFIA4-208ENST00000597023 PPLO60437 1756 aa23.03■■□□□ 1.28
PPFIA4-208ENST00000597023 ACIN1Q9UKV3 1341 aaKnown RBP23.02■■□□□ 1.28
PPFIA4-208ENST00000597023 ADGRL3Q9HAR2 1447 aa23.01■■□□□ 1.27
PPFIA4-208ENST00000597023 STK26Q9P289 416 aa23.01■■□□□ 1.27
PPFIA4-208ENST00000597023 JCADQ9P266 1359 aa23.01■■□□□ 1.27
PPFIA4-208ENST00000597023 DCCP43146 1447 aa23■■□□□ 1.27
PPFIA4-208ENST00000597023 MST1RQ04912 1400 aa23■■□□□ 1.27
PPFIA4-208ENST00000597023 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
PPFIA4-208ENST00000597023 TMEM132EQ6IEE7 984 aa22.99■■□□□ 1.27
PPFIA4-208ENST00000597023 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
PPFIA4-208ENST00000597023 ANKRD30BQ9BXX2 1392 aa22.99■■□□□ 1.27
PPFIA4-208ENST00000597023 PTCH1Q13635 1447 aa22.97■■□□□ 1.27
PPFIA4-208ENST00000597023 COL16A1Q07092 1604 aaPredicted RBP22.97■■□□□ 1.27
PPFIA4-208ENST00000597023 NALCNQ8IZF0 1738 aa22.94■■□□□ 1.26
PPFIA4-208ENST00000597023 WAPLQ7Z5K2 1190 aa22.94■■□□□ 1.26
PPFIA4-208ENST00000597023 AHDC1Q5TGY3 1603 aaPredicted RBP22.93■■□□□ 1.26
PPFIA4-208ENST00000597023 ASXL1Q8IXJ9 1541 aa22.93■■□□□ 1.26
PPFIA4-208ENST00000597023 POTEAQ6S8J7 498 aa22.93■■□□□ 1.26
PPFIA4-208ENST00000597023 ORAI2Q96SN7 254 aa22.92■■□□□ 1.26
PPFIA4-208ENST00000597023 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
PPFIA4-208ENST00000597023 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
PPFIA4-208ENST00000597023 NUTM2AQ8IVF1 878 aaPredicted RBP22.91■■□□□ 1.26
PPFIA4-208ENST00000597023 C1orf167Q5SNV9 1468 aa22.91■■□□□ 1.26
PPFIA4-208ENST00000597023 PIK3C2GO75747 1445 aa22.91■■□□□ 1.26
PPFIA4-208ENST00000597023 CFAP70Q5T0N1 1121 aa22.9■■□□□ 1.26
PPFIA4-208ENST00000597023 LRPPRCP42704 1394 aaKnown RBP22.89■■□□□ 1.26
PPFIA4-208ENST00000597023 IFT172Q9UG01 1749 aa22.89■■□□□ 1.26
PPFIA4-208ENST00000597023 MEX3CQ5U5Q3 659 aaKnown RBP22.89■■□□□ 1.25
PPFIA4-208ENST00000597023 PRAG1Q86YV5 1406 aa22.89■■□□□ 1.25
PPFIA4-208ENST00000597023 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.25
PPFIA4-208ENST00000597023 NUTM2FA1L443 756 aa22.88■■□□□ 1.25
PPFIA4-208ENST00000597023 C14orf93Q9H972 538 aaKnown RBP22.88■■□□□ 1.25
PPFIA4-208ENST00000597023 LRP6O75581 1613 aa22.88■■□□□ 1.25
PPFIA4-208ENST00000597023 SPATA31A6Q5VVP1 1343 aa22.87■■□□□ 1.25
PPFIA4-208ENST00000597023 HRCP23327 699 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms