RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 KCNA6P17658 529 aa24.08■■□□□ 1.45
PSMC4-204ENST00000596386 NWD1Q149M9 1564 aa24.08■■□□□ 1.44
PSMC4-204ENST00000596386 TMEM94Q12767 1356 aa24.06■■□□□ 1.44
PSMC4-204ENST00000596386 NKTRP30414 1462 aaKnown RBP24.06■■□□□ 1.44
PSMC4-204ENST00000596386 RIMS2Q9UQ26 1411 aa24.05■■□□□ 1.44
PSMC4-204ENST00000596386 PLEKHG1Q9ULL1 1385 aa24.04■■□□□ 1.44
PSMC4-204ENST00000596386 ITGAEP38570 1179 aa24.03■■□□□ 1.44
PSMC4-204ENST00000596386 PPARGC1BQ86YN6 1023 aaKnown RBP24.03■■□□□ 1.44
PSMC4-204ENST00000596386 NUP155O75694 1391 aa24.03■■□□□ 1.44
PSMC4-204ENST00000596386 BCANQ96GW7 911 aa24.02■■□□□ 1.44
PSMC4-204ENST00000596386 PPP1R15AO75807 674 aaPredicted RBP24.01■■□□□ 1.43
PSMC4-204ENST00000596386 HDGFP51858 240 aaKnown RBP24.01■■□□□ 1.43
PSMC4-204ENST00000596386 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
PSMC4-204ENST00000596386 PROSER2Q86WR7 435 aaPredicted RBP24■■□□□ 1.43
PSMC4-204ENST00000596386 FAM135BQ49AJ0 1406 aa23.99■■□□□ 1.43
PSMC4-204ENST00000596386 CHD2O14647 1828 aaKnown RBP23.97■■□□□ 1.43
PSMC4-204ENST00000596386 CHGAP10645 457 aaKnown RBP23.97■■□□□ 1.43
PSMC4-204ENST00000596386 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.97■■□□□ 1.43
PSMC4-204ENST00000596386 RBM33Q96EV2 1170 aaKnown RBP23.95■■□□□ 1.42
PSMC4-204ENST00000596386 RRBP1Q9P2E9 1410 aaKnown RBP23.94■■□□□ 1.42
PSMC4-204ENST00000596386 TBX22Q9Y458 520 aa23.93■■□□□ 1.42
PSMC4-204ENST00000596386 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
PSMC4-204ENST00000596386 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
PSMC4-204ENST00000596386 ROBO1Q9Y6N7 1651 aa23.92■■□□□ 1.42
PSMC4-204ENST00000596386 MSH6P52701 1360 aa23.92■■□□□ 1.42
PSMC4-204ENST00000596386 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
PSMC4-204ENST00000596386 SPHKAPQ2M3C7 1700 aa23.91■■□□□ 1.42
PSMC4-204ENST00000596386 NUTM2DQ5VT03 806 aaPredicted RBP23.89■■□□□ 1.41
PSMC4-204ENST00000596386 PIK3R4Q99570 1358 aa23.88■■□□□ 1.41
PSMC4-204ENST00000596386 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
PSMC4-204ENST00000596386 NAIPQ13075 1403 aa23.84■■□□□ 1.41
PSMC4-204ENST00000596386 TRPM2O94759 1503 aa23.84■■□□□ 1.41
PSMC4-204ENST00000596386 SLAIN2Q9P270 581 aa23.83■■□□□ 1.41
PSMC4-204ENST00000596386 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
PSMC4-204ENST00000596386 SETBP1Q9Y6X0 1596 aa23.8■■□□□ 1.4
PSMC4-204ENST00000596386 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
PSMC4-204ENST00000596386 HFM1A2PYH4 1435 aa23.77■■□□□ 1.4
PSMC4-204ENST00000596386 PTPRUQ92729 1446 aa23.77■■□□□ 1.4
PSMC4-204ENST00000596386 PHLPP1O60346 1717 aa23.77■■□□□ 1.4
PSMC4-204ENST00000596386 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
PSMC4-204ENST00000596386 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
PSMC4-204ENST00000596386 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
PSMC4-204ENST00000596386 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
PSMC4-204ENST00000596386 RGS17Q9UGC6 210 aaPredicted RBP23.75■■□□□ 1.39
PSMC4-204ENST00000596386 AMOTL2Q9Y2J4 779 aa23.75■■□□□ 1.39
PSMC4-204ENST00000596386 NEXMIFQ5QGS0 1516 aa23.74■■□□□ 1.39
PSMC4-204ENST00000596386 CADPS2Q86UW7 1296 aa23.74■■□□□ 1.39
PSMC4-204ENST00000596386 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
PSMC4-204ENST00000596386 COL16A1Q07092 1604 aaPredicted RBP23.72■■□□□ 1.39
PSMC4-204ENST00000596386 KIF1BO60333 1816 aa23.72■■□□□ 1.39
PSMC4-204ENST00000596386 JCADQ9P266 1359 aa23.7■■□□□ 1.38
PSMC4-204ENST00000596386 ATF3P18847 181 aa23.7■■□□□ 1.38
PSMC4-204ENST00000596386 DCCP43146 1447 aa23.69■■□□□ 1.38
PSMC4-204ENST00000596386 METP08581 1390 aa23.69■■□□□ 1.38
PSMC4-204ENST00000596386 AHDC1Q5TGY3 1603 aaPredicted RBP23.68■■□□□ 1.38
PSMC4-204ENST00000596386 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
PSMC4-204ENST00000596386 SLC4A1APQ9BWU0 796 aaKnown RBP23.64■■□□□ 1.37
PSMC4-204ENST00000596386 BRINP3Q76B58 766 aa23.61■■□□□ 1.37
PSMC4-204ENST00000596386 ADGRL3Q9HAR2 1447 aa23.6■■□□□ 1.37
PSMC4-204ENST00000596386 POTEAQ6S8J7 498 aa23.6■■□□□ 1.37
PSMC4-204ENST00000596386 MST1RQ04912 1400 aa23.59■■□□□ 1.37
PSMC4-204ENST00000596386 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
PSMC4-204ENST00000596386 SETD1AO15047 1707 aaKnown RBP23.59■■□□□ 1.37
PSMC4-204ENST00000596386 SHPRHQ149N8 1683 aa23.59■■□□□ 1.37
PSMC4-204ENST00000596386 SPATA31A6Q5VVP1 1343 aa23.59■■□□□ 1.37
PSMC4-204ENST00000596386 VGFO15240 615 aaPredicted RBP23.58■■□□□ 1.37
PSMC4-204ENST00000596386 NALCNQ8IZF0 1738 aa23.58■■□□□ 1.37
PSMC4-204ENST00000596386 RPGRIP1LQ68CZ1 1315 aa23.58■■□□□ 1.36
PSMC4-204ENST00000596386 LRP6O75581 1613 aa23.57■■□□□ 1.36
PSMC4-204ENST00000596386 PTCH1Q13635 1447 aa23.57■■□□□ 1.36
PSMC4-204ENST00000596386 PPLO60437 1756 aa23.56■■□□□ 1.36
PSMC4-204ENST00000596386 PRAG1Q86YV5 1406 aa23.54■■□□□ 1.36
PSMC4-204ENST00000596386 NHSL1Q5SYE7 1610 aa23.54■■□□□ 1.36
PSMC4-204ENST00000596386 FOXD1Q16676 465 aa23.51■■□□□ 1.35
PSMC4-204ENST00000596386 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
PSMC4-204ENST00000596386 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
PSMC4-204ENST00000596386 CCDC144AA2RUR9 1427 aa23.5■■□□□ 1.35
PSMC4-204ENST00000596386 MEX3CQ5U5Q3 659 aaKnown RBP23.48■■□□□ 1.35
PSMC4-204ENST00000596386 C1orf167Q5SNV9 1468 aa23.46■■□□□ 1.35
PSMC4-204ENST00000596386 SPATA31E1Q6ZUB1 1445 aa23.45■■□□□ 1.34
PSMC4-204ENST00000596386 MPHOSPH9Q99550 1183 aa23.45■■□□□ 1.34
PSMC4-204ENST00000596386 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
PSMC4-204ENST00000596386 ZNF772Q68DY9 489 aaPredicted RBP23.43■■□□□ 1.34
PSMC4-204ENST00000596386 LRRC59Q96AG4 307 aaKnown RBP23.43■■□□□ 1.34
PSMC4-204ENST00000596386 LAMC1P11047 1609 aa23.42■■□□□ 1.34
PSMC4-204ENST00000596386 ADGRF5Q8IZF2 1346 aa23.41■■□□□ 1.34
PSMC4-204ENST00000596386 DDX17Q92841 729 aaKnown RBP23.41■■□□□ 1.34
PSMC4-204ENST00000596386 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
PSMC4-204ENST00000596386 NUTM2BA6NNL0 878 aaPredicted RBP23.4■■□□□ 1.34
PSMC4-204ENST00000596386 NUTM2EB1AL46 878 aaPredicted RBP23.4■■□□□ 1.34
PSMC4-204ENST00000596386 NUTM2AQ8IVF1 878 aaPredicted RBP23.4■■□□□ 1.34
PSMC4-204ENST00000596386 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
PSMC4-204ENST00000596386 RGL3Q3MIN7 710 aa23.39■■□□□ 1.33
PSMC4-204ENST00000596386 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
PSMC4-204ENST00000596386 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
PSMC4-204ENST00000596386 TECPR2O15040 1411 aa23.37■■□□□ 1.33
PSMC4-204ENST00000596386 ORAI2Q96SN7 254 aa23.36■■□□□ 1.33
PSMC4-204ENST00000596386 PIK3C2GO75747 1445 aa23.35■■□□□ 1.33
PSMC4-204ENST00000596386 SOS2Q07890 1332 aaPredicted RBP23.33■■□□□ 1.33
PSMC4-204ENST00000596386 LRPPRCP42704 1394 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms