RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ANKRD50Q9ULJ7 1429 aa15.55■□□□□ 0.08
LIG1-209ENST00000596104 ZFYVE9O95405 1425 aa15.54■□□□□ 0.08
LIG1-209ENST00000596104 PLEKHG1Q9ULL1 1385 aa15.52■□□□□ 0.08
LIG1-209ENST00000596104 FAM50AQ14320 339 aaKnown RBP15.52■□□□□ 0.08
LIG1-209ENST00000596104 POTEAQ6S8J7 498 aa15.51■□□□□ 0.07
LIG1-209ENST00000596104 RIMS2Q9UQ26 1411 aa15.51■□□□□ 0.07
LIG1-209ENST00000596104 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
LIG1-209ENST00000596104 MSH6P52701 1360 aa15.5■□□□□ 0.07
LIG1-209ENST00000596104 BCANQ96GW7 911 aa15.5■□□□□ 0.07
LIG1-209ENST00000596104 SLAIN2Q9P270 581 aa15.49■□□□□ 0.07
LIG1-209ENST00000596104 TBX22Q9Y458 520 aa15.48■□□□□ 0.07
LIG1-209ENST00000596104 HDGFP51858 240 aaKnown RBP15.47■□□□□ 0.07
LIG1-209ENST00000596104 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.07
LIG1-209ENST00000596104 PPP1R15AO75807 674 aaPredicted RBP15.46■□□□□ 0.07
LIG1-209ENST00000596104 ADAMTS13Q76LX8 1427 aa15.45■□□□□ 0.06
LIG1-209ENST00000596104 NCOA3Q9Y6Q9 1424 aa15.45■□□□□ 0.06
LIG1-209ENST00000596104 UNC13BO14795 1591 aa15.45■□□□□ 0.06
LIG1-209ENST00000596104 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.44■□□□□ 0.06
LIG1-209ENST00000596104 JCADQ9P266 1359 aa15.44■□□□□ 0.06
LIG1-209ENST00000596104 ROCK1Q13464 1354 aa15.43■□□□□ 0.06
LIG1-209ENST00000596104 GCC2Q8IWJ2 1684 aa15.42■□□□□ 0.06
LIG1-209ENST00000596104 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
LIG1-209ENST00000596104 CHD2O14647 1828 aaKnown RBP15.41■□□□□ 0.06
LIG1-209ENST00000596104 PIK3R4Q99570 1358 aa15.41■□□□□ 0.06
LIG1-209ENST00000596104 NUTM2DQ5VT03 806 aaPredicted RBP15.41■□□□□ 0.06
LIG1-209ENST00000596104 COL16A1Q07092 1604 aaPredicted RBP15.39■□□□□ 0.05
LIG1-209ENST00000596104 MYO5BQ9ULV0 1848 aa15.39■□□□□ 0.05
LIG1-209ENST00000596104 C19orf44Q9H6X5 657 aa15.39■□□□□ 0.05
LIG1-209ENST00000596104 DIP2AQ14689 1571 aa15.39■□□□□ 0.05
LIG1-209ENST00000596104 E9PCH4 1651 aa15.38■□□□□ 0.05
LIG1-209ENST00000596104 PHLPP1O60346 1717 aa15.38■□□□□ 0.05
LIG1-209ENST00000596104 CADPS2Q86UW7 1296 aa15.38■□□□□ 0.05
LIG1-209ENST00000596104 NUP155O75694 1391 aa15.37■□□□□ 0.05
LIG1-209ENST00000596104 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
LIG1-209ENST00000596104 LRP6O75581 1613 aa15.37■□□□□ 0.05
LIG1-209ENST00000596104 IQGAP3Q86VI3 1631 aa15.37■□□□□ 0.05
LIG1-209ENST00000596104 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
LIG1-209ENST00000596104 SPATA31A6Q5VVP1 1343 aa15.37■□□□□ 0.05
LIG1-209ENST00000596104 ATF3P18847 181 aa15.35■□□□□ 0.05
LIG1-209ENST00000596104 AMOTL2Q9Y2J4 779 aa15.35■□□□□ 0.05
LIG1-209ENST00000596104 AHDC1Q5TGY3 1603 aaPredicted RBP15.35■□□□□ 0.05
LIG1-209ENST00000596104 TRPM2O94759 1503 aa15.34■□□□□ 0.05
LIG1-209ENST00000596104 BRINP3Q76B58 766 aa15.33■□□□□ 0.04
LIG1-209ENST00000596104 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.33■□□□□ 0.04
LIG1-209ENST00000596104 DCCP43146 1447 aa15.32■□□□□ 0.04
LIG1-209ENST00000596104 ITGAEP38570 1179 aa15.3■□□□□ 0.04
LIG1-209ENST00000596104 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
LIG1-209ENST00000596104 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
LIG1-209ENST00000596104 NRXN3Q9Y4C0 1643 aa15.29■□□□□ 0.04
LIG1-209ENST00000596104 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
LIG1-209ENST00000596104 SETD1AO15047 1707 aaKnown RBP15.29■□□□□ 0.04
LIG1-209ENST00000596104 MST1RQ04912 1400 aa15.28■□□□□ 0.04
LIG1-209ENST00000596104 METP08581 1390 aa15.28■□□□□ 0.04
LIG1-209ENST00000596104 XRN1Q8IZH2 1706 aaKnown RBP15.28■□□□□ 0.04
LIG1-209ENST00000596104 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
LIG1-209ENST00000596104 ASXL1Q8IXJ9 1541 aa15.27■□□□□ 0.03
LIG1-209ENST00000596104 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
LIG1-209ENST00000596104 ZNF326Q5BKZ1 582 aaKnown RBP15.25■□□□□ 0.03
LIG1-209ENST00000596104 UPF1Q92900 1129 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIG1-209ENST00000596104 TRIM52Q96A61 297 aa15.24■□□□□ 0.03
LIG1-209ENST00000596104 ADGRL3Q9HAR2 1447 aa15.24■□□□□ 0.03
LIG1-209ENST00000596104 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
LIG1-209ENST00000596104 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
LIG1-209ENST00000596104 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
LIG1-209ENST00000596104 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
LIG1-209ENST00000596104 RXRBP28702 533 aa15.22■□□□□ 0.03
LIG1-209ENST00000596104 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
LIG1-209ENST00000596104 SPHKAPQ2M3C7 1700 aa15.22■□□□□ 0.03
LIG1-209ENST00000596104 CDK12Q9NYV4 1490 aaPredicted RBP15.21■□□□□ 0.03
LIG1-209ENST00000596104 AFF2P51816 1311 aa15.21■□□□□ 0.03
LIG1-209ENST00000596104 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.03
LIG1-209ENST00000596104 DDX17Q92841 729 aaKnown RBP15.2■□□□□ 0.02
LIG1-209ENST00000596104 CLTCL1P53675 1640 aa15.2■□□□□ 0.02
LIG1-209ENST00000596104 NHSL1Q5SYE7 1610 aa15.2■□□□□ 0.02
LIG1-209ENST00000596104 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
LIG1-209ENST00000596104 NAIPQ13075 1403 aa15.18■□□□□ 0.02
LIG1-209ENST00000596104 PTCH1Q13635 1447 aa15.17■□□□□ 0.02
LIG1-209ENST00000596104 RRBP1Q9P2E9 1410 aaKnown RBP15.17■□□□□ 0.02
LIG1-209ENST00000596104 C1orf167Q5SNV9 1468 aa15.17■□□□□ 0.02
LIG1-209ENST00000596104 PRAG1Q86YV5 1406 aa15.17■□□□□ 0.02
LIG1-209ENST00000596104 ROBO2Q9HCK4 1378 aa15.16■□□□□ 0.02
LIG1-209ENST00000596104 NALCNQ8IZF0 1738 aa15.15■□□□□ 0.02
LIG1-209ENST00000596104 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
LIG1-209ENST00000596104 VGFO15240 615 aaPredicted RBP15.14■□□□□ 0.01
LIG1-209ENST00000596104 RGS12O14924 1447 aa15.14■□□□□ 0.01
LIG1-209ENST00000596104 SOS2Q07890 1332 aaPredicted RBP15.14■□□□□ 0.01
LIG1-209ENST00000596104 RBM6P78332 1123 aaKnown RBP15.13■□□□□ 0.01
LIG1-209ENST00000596104 ORAI2Q96SN7 254 aa15.13■□□□□ 0.01
LIG1-209ENST00000596104 QTRT2Q9H974 415 aaKnown RBP15.13■□□□□ 0.01
LIG1-209ENST00000596104 LAMC1P11047 1609 aa15.12■□□□□ 0.01
LIG1-209ENST00000596104 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
LIG1-209ENST00000596104 ADAMTS2O95450 1211 aa15.11■□□□□ 0.01
LIG1-209ENST00000596104 HFM1A2PYH4 1435 aa15.1■□□□□ 0.01
LIG1-209ENST00000596104 NGLY1Q96IV0 654 aa15.09■□□□□ 0.01
LIG1-209ENST00000596104 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
LIG1-209ENST00000596104 FNBP4Q8N3X1 1017 aaPredicted RBP15.07■□□□□ 0
LIG1-209ENST00000596104 KIF1BO60333 1816 aa15.07■□□□□ 0
LIG1-209ENST00000596104 USP21Q9UK80 565 aa15.05■□□□□ -0
LIG1-209ENST00000596104 MYOM2P54296 1465 aa15.05■□□□□ -0
LIG1-209ENST00000596104 TRPC5Q9UL62 973 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms