RNA–Protein interactions for RNA: ENST00000596070.1

CLPP-203, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 5

Gene CLPP, Length 1,346 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-203ENST00000596070 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
CLPP-203ENST00000596070 NWD1Q149M9 1564 aa24.48■■□□□ 1.51
CLPP-203ENST00000596070 CHD2O14647 1828 aaKnown RBP24.46■■□□□ 1.51
CLPP-203ENST00000596070 SPHKAPQ2M3C7 1700 aa24.46■■□□□ 1.51
CLPP-203ENST00000596070 ZFYVE9O95405 1425 aa24.45■■□□□ 1.5
CLPP-203ENST00000596070 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
CLPP-203ENST00000596070 BCANQ96GW7 911 aa24.44■■□□□ 1.5
CLPP-203ENST00000596070 CHGAP10645 457 aaKnown RBP24.42■■□□□ 1.5
CLPP-203ENST00000596070 NUP155O75694 1391 aa24.41■■□□□ 1.5
CLPP-203ENST00000596070 TMEM94Q12767 1356 aa24.41■■□□□ 1.5
CLPP-203ENST00000596070 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
CLPP-203ENST00000596070 NKTRP30414 1462 aaKnown RBP24.4■■□□□ 1.5
CLPP-203ENST00000596070 SOCS7O14512 581 aa24.39■■□□□ 1.5
CLPP-203ENST00000596070 PPP1R15AO75807 674 aaPredicted RBP24.39■■□□□ 1.5
CLPP-203ENST00000596070 ROBO1Q9Y6N7 1651 aa24.38■■□□□ 1.49
CLPP-203ENST00000596070 PLEKHG1Q9ULL1 1385 aa24.38■■□□□ 1.49
CLPP-203ENST00000596070 KCNA6P17658 529 aa24.37■■□□□ 1.49
CLPP-203ENST00000596070 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
CLPP-203ENST00000596070 PROSER2Q86WR7 435 aaPredicted RBP24.35■■□□□ 1.49
CLPP-203ENST00000596070 RRBP1Q9P2E9 1410 aaKnown RBP24.33■■□□□ 1.49
CLPP-203ENST00000596070 DIP2AQ14689 1571 aa24.31■■□□□ 1.48
CLPP-203ENST00000596070 KIF1BO60333 1816 aa24.3■■□□□ 1.48
CLPP-203ENST00000596070 CLTCL1P53675 1640 aa24.3■■□□□ 1.48
CLPP-203ENST00000596070 ADAMTS13Q76LX8 1427 aa24.28■■□□□ 1.48
CLPP-203ENST00000596070 HDGFP51858 240 aaKnown RBP24.28■■□□□ 1.48
CLPP-203ENST00000596070 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
CLPP-203ENST00000596070 NRXN3Q9Y4C0 1643 aa24.27■■□□□ 1.48
CLPP-203ENST00000596070 PHLPP1O60346 1717 aa24.27■■□□□ 1.48
CLPP-203ENST00000596070 MSH6P52701 1360 aa24.26■■□□□ 1.47
CLPP-203ENST00000596070 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.26■■□□□ 1.47
CLPP-203ENST00000596070 FAM135BQ49AJ0 1406 aa24.25■■□□□ 1.47
CLPP-203ENST00000596070 TRPM2O94759 1503 aa24.25■■□□□ 1.47
CLPP-203ENST00000596070 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.25■■□□□ 1.47
CLPP-203ENST00000596070 NAIPQ13075 1403 aa24.25■■□□□ 1.47
CLPP-203ENST00000596070 TBX22Q9Y458 520 aa24.21■■□□□ 1.47
CLPP-203ENST00000596070 XRN1Q8IZH2 1706 aaKnown RBP24.2■■□□□ 1.47
CLPP-203ENST00000596070 SETBP1Q9Y6X0 1596 aa24.19■■□□□ 1.46
CLPP-203ENST00000596070 C14orf37Q86TY3 774 aa24.18■■□□□ 1.46
CLPP-203ENST00000596070 NEXMIFQ5QGS0 1516 aa24.18■■□□□ 1.46
CLPP-203ENST00000596070 ZNF326Q5BKZ1 582 aaKnown RBP24.17■■□□□ 1.46
CLPP-203ENST00000596070 PTPRUQ92729 1446 aa24.17■■□□□ 1.46
CLPP-203ENST00000596070 PIK3R4Q99570 1358 aa24.15■■□□□ 1.46
CLPP-203ENST00000596070 HFM1A2PYH4 1435 aa24.14■■□□□ 1.46
CLPP-203ENST00000596070 COL16A1Q07092 1604 aaPredicted RBP24.14■■□□□ 1.45
CLPP-203ENST00000596070 SLAIN2Q9P270 581 aa24.12■■□□□ 1.45
CLPP-203ENST00000596070 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
CLPP-203ENST00000596070 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
CLPP-203ENST00000596070 PPLO60437 1756 aa24.1■■□□□ 1.45
CLPP-203ENST00000596070 NALCNQ8IZF0 1738 aa24.1■■□□□ 1.45
CLPP-203ENST00000596070 AMOTL2Q9Y2J4 779 aa24.1■■□□□ 1.45
CLPP-203ENST00000596070 NCOA3Q9Y6Q9 1424 aa24.09■■□□□ 1.45
CLPP-203ENST00000596070 METP08581 1390 aa24.06■■□□□ 1.44
CLPP-203ENST00000596070 AHDC1Q5TGY3 1603 aaPredicted RBP24.05■■□□□ 1.44
CLPP-203ENST00000596070 RGS17Q9UGC6 210 aaPredicted RBP24.05■■□□□ 1.44
CLPP-203ENST00000596070 ATF3P18847 181 aa24.04■■□□□ 1.44
CLPP-203ENST00000596070 C19orf44Q9H6X5 657 aa24.03■■□□□ 1.44
CLPP-203ENST00000596070 SHPRHQ149N8 1683 aa24.03■■□□□ 1.44
CLPP-203ENST00000596070 CADPS2Q86UW7 1296 aa24.02■■□□□ 1.44
CLPP-203ENST00000596070 SLC4A1APQ9BWU0 796 aaKnown RBP24.02■■□□□ 1.44
CLPP-203ENST00000596070 JCADQ9P266 1359 aa24.01■■□□□ 1.43
CLPP-203ENST00000596070 NHSL1Q5SYE7 1610 aa23.99■■□□□ 1.43
CLPP-203ENST00000596070 ASXL1Q8IXJ9 1541 aa23.98■■□□□ 1.43
CLPP-203ENST00000596070 FOXD1Q16676 465 aa23.98■■□□□ 1.43
CLPP-203ENST00000596070 DCCP43146 1447 aa23.98■■□□□ 1.43
CLPP-203ENST00000596070 IFT172Q9UG01 1749 aa23.98■■□□□ 1.43
CLPP-203ENST00000596070 LRP6O75581 1613 aa23.96■■□□□ 1.43
CLPP-203ENST00000596070 MST1RQ04912 1400 aa23.95■■□□□ 1.42
CLPP-203ENST00000596070 ADGRL3Q9HAR2 1447 aa23.95■■□□□ 1.42
CLPP-203ENST00000596070 POTEAQ6S8J7 498 aa23.93■■□□□ 1.42
CLPP-203ENST00000596070 BRINP3Q76B58 766 aa23.93■■□□□ 1.42
CLPP-203ENST00000596070 PTCH1Q13635 1447 aa23.89■■□□□ 1.42
CLPP-203ENST00000596070 CCDC144AA2RUR9 1427 aa23.88■■□□□ 1.41
CLPP-203ENST00000596070 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
CLPP-203ENST00000596070 ROBO2Q9HCK4 1378 aa23.87■■□□□ 1.41
CLPP-203ENST00000596070 MEX3CQ5U5Q3 659 aaKnown RBP23.86■■□□□ 1.41
CLPP-203ENST00000596070 SPATA31A6Q5VVP1 1343 aa23.85■■□□□ 1.41
CLPP-203ENST00000596070 RPGRIP1LQ68CZ1 1315 aa23.85■■□□□ 1.41
CLPP-203ENST00000596070 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
CLPP-203ENST00000596070 MPHOSPH9Q99550 1183 aa23.83■■□□□ 1.4
CLPP-203ENST00000596070 SPATA31E1Q6ZUB1 1445 aa23.82■■□□□ 1.4
CLPP-203ENST00000596070 KNDC1Q76NI1 1749 aa23.82■■□□□ 1.4
CLPP-203ENST00000596070 RGL3Q3MIN7 710 aa23.82■■□□□ 1.4
CLPP-203ENST00000596070 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
CLPP-203ENST00000596070 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
CLPP-203ENST00000596070 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
CLPP-203ENST00000596070 PRAG1Q86YV5 1406 aa23.81■■□□□ 1.4
CLPP-203ENST00000596070 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
CLPP-203ENST00000596070 LAMC1P11047 1609 aa23.8■■□□□ 1.4
CLPP-203ENST00000596070 SETD5Q9C0A6 1442 aa23.8■■□□□ 1.4
CLPP-203ENST00000596070 ADGRF5Q8IZF2 1346 aa23.8■■□□□ 1.4
CLPP-203ENST00000596070 CDC42BPGQ6DT37 1551 aa23.77■■□□□ 1.4
CLPP-203ENST00000596070 PNPLA6Q8IY17 1366 aa23.73■■□□□ 1.39
CLPP-203ENST00000596070 ANKRD30BQ9BXX2 1392 aa23.73■■□□□ 1.39
CLPP-203ENST00000596070 PIK3C2GO75747 1445 aa23.72■■□□□ 1.39
CLPP-203ENST00000596070 ORAI2Q96SN7 254 aa23.72■■□□□ 1.39
CLPP-203ENST00000596070 STK26Q9P289 416 aa23.72■■□□□ 1.39
CLPP-203ENST00000596070 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
CLPP-203ENST00000596070 LRRC59Q96AG4 307 aaKnown RBP23.71■■□□□ 1.39
CLPP-203ENST00000596070 FMN2Q9NZ56 1722 aa23.71■■□□□ 1.39
CLPP-203ENST00000596070 ZNF772Q68DY9 489 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms