RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 UNC13BO14795 1591 aa22.89■■□□□ 1.25
XRCC1-205ENST00000595789 PLEKHG1Q9ULL1 1385 aa22.88■■□□□ 1.25
XRCC1-205ENST00000595789 RIMS2Q9UQ26 1411 aa22.87■■□□□ 1.25
XRCC1-205ENST00000595789 NWD1Q149M9 1564 aa22.86■■□□□ 1.25
XRCC1-205ENST00000595789 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
XRCC1-205ENST00000595789 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
XRCC1-205ENST00000595789 HDGFP51858 240 aaKnown RBP22.85■■□□□ 1.25
XRCC1-205ENST00000595789 BCANQ96GW7 911 aa22.85■■□□□ 1.25
XRCC1-205ENST00000595789 PHF23Q9BUL5 403 aaPredicted RBP22.85■■□□□ 1.25
XRCC1-205ENST00000595789 GCC2Q8IWJ2 1684 aa22.84■■□□□ 1.25
XRCC1-205ENST00000595789 TBX22Q9Y458 520 aa22.83■■□□□ 1.25
XRCC1-205ENST00000595789 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
XRCC1-205ENST00000595789 E9PCH4 1651 aa22.81■■□□□ 1.24
XRCC1-205ENST00000595789 NUP155O75694 1391 aa22.81■■□□□ 1.24
XRCC1-205ENST00000595789 PPP1R15AO75807 674 aaPredicted RBP22.81■■□□□ 1.24
XRCC1-205ENST00000595789 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.81■■□□□ 1.24
XRCC1-205ENST00000595789 RGS17Q9UGC6 210 aaPredicted RBP22.81■■□□□ 1.24
XRCC1-205ENST00000595789 IQGAP3Q86VI3 1631 aa22.8■■□□□ 1.24
XRCC1-205ENST00000595789 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
XRCC1-205ENST00000595789 PPARGC1BQ86YN6 1023 aaKnown RBP22.8■■□□□ 1.24
XRCC1-205ENST00000595789 ITGAEP38570 1179 aa22.79■■□□□ 1.24
XRCC1-205ENST00000595789 ADAMTS13Q76LX8 1427 aa22.78■■□□□ 1.24
XRCC1-205ENST00000595789 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
XRCC1-205ENST00000595789 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
XRCC1-205ENST00000595789 CHD2O14647 1828 aaKnown RBP22.77■■□□□ 1.24
XRCC1-205ENST00000595789 MSH6P52701 1360 aa22.76■■□□□ 1.23
XRCC1-205ENST00000595789 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
XRCC1-205ENST00000595789 NCOA3Q9Y6Q9 1424 aa22.73■■□□□ 1.23
XRCC1-205ENST00000595789 PIK3R4Q99570 1358 aa22.72■■□□□ 1.23
XRCC1-205ENST00000595789 DIP2AQ14689 1571 aa22.67■■□□□ 1.22
XRCC1-205ENST00000595789 PTPRUQ92729 1446 aa22.66■■□□□ 1.22
XRCC1-205ENST00000595789 C19orf44Q9H6X5 657 aa22.66■■□□□ 1.22
XRCC1-205ENST00000595789 AMOTL2Q9Y2J4 779 aa22.66■■□□□ 1.22
XRCC1-205ENST00000595789 POTEAQ6S8J7 498 aa22.65■■□□□ 1.22
XRCC1-205ENST00000595789 RRBP1Q9P2E9 1410 aaKnown RBP22.64■■□□□ 1.21
XRCC1-205ENST00000595789 C14orf37Q86TY3 774 aa22.62■■□□□ 1.21
XRCC1-205ENST00000595789 CADPS2Q86UW7 1296 aa22.62■■□□□ 1.21
XRCC1-205ENST00000595789 JCADQ9P266 1359 aa22.62■■□□□ 1.21
XRCC1-205ENST00000595789 TRPM2O94759 1503 aa22.61■■□□□ 1.21
XRCC1-205ENST00000595789 NAIPQ13075 1403 aa22.6■■□□□ 1.21
XRCC1-205ENST00000595789 ATF3P18847 181 aa22.59■■□□□ 1.21
XRCC1-205ENST00000595789 NRXN3Q9Y4C0 1643 aa22.59■■□□□ 1.21
XRCC1-205ENST00000595789 PHLPP1O60346 1717 aa22.59■■□□□ 1.21
XRCC1-205ENST00000595789 SPHKAPQ2M3C7 1700 aa22.59■■□□□ 1.21
XRCC1-205ENST00000595789 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.59■■□□□ 1.21
XRCC1-205ENST00000595789 ZNF326Q5BKZ1 582 aaKnown RBP22.58■■□□□ 1.21
XRCC1-205ENST00000595789 SETBP1Q9Y6X0 1596 aa22.58■■□□□ 1.2
XRCC1-205ENST00000595789 COL16A1Q07092 1604 aaPredicted RBP22.57■■□□□ 1.2
XRCC1-205ENST00000595789 METP08581 1390 aa22.56■■□□□ 1.2
XRCC1-205ENST00000595789 BRINP3Q76B58 766 aa22.53■■□□□ 1.2
XRCC1-205ENST00000595789 XRN1Q8IZH2 1706 aaKnown RBP22.53■■□□□ 1.2
XRCC1-205ENST00000595789 CLTCL1P53675 1640 aa22.53■■□□□ 1.2
XRCC1-205ENST00000595789 AHDC1Q5TGY3 1603 aaPredicted RBP22.53■■□□□ 1.2
XRCC1-205ENST00000595789 DCCP43146 1447 aa22.52■■□□□ 1.2
XRCC1-205ENST00000595789 SPATA31A6Q5VVP1 1343 aa22.51■■□□□ 1.19
XRCC1-205ENST00000595789 NEXMIFQ5QGS0 1516 aa22.51■■□□□ 1.19
XRCC1-205ENST00000595789 LRP6O75581 1613 aa22.49■■□□□ 1.19
XRCC1-205ENST00000595789 HFM1A2PYH4 1435 aa22.48■■□□□ 1.19
XRCC1-205ENST00000595789 MST1RQ04912 1400 aa22.47■■□□□ 1.19
XRCC1-205ENST00000595789 TRIM52Q96A61 297 aa22.45■■□□□ 1.18
XRCC1-205ENST00000595789 ADGRL3Q9HAR2 1447 aa22.43■■□□□ 1.18
XRCC1-205ENST00000595789 VGFO15240 615 aaPredicted RBP22.43■■□□□ 1.18
XRCC1-205ENST00000595789 ASXL1Q8IXJ9 1541 aa22.42■■□□□ 1.18
XRCC1-205ENST00000595789 SLC4A1APQ9BWU0 796 aaKnown RBP22.42■■□□□ 1.18
XRCC1-205ENST00000595789 SHPRHQ149N8 1683 aa22.42■■□□□ 1.18
XRCC1-205ENST00000595789 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
XRCC1-205ENST00000595789 RPGRIP1LQ68CZ1 1315 aa22.41■■□□□ 1.18
XRCC1-205ENST00000595789 KIF1BO60333 1816 aa22.41■■□□□ 1.18
XRCC1-205ENST00000595789 MEX3CQ5U5Q3 659 aaKnown RBP22.39■■□□□ 1.17
XRCC1-205ENST00000595789 ZNF772Q68DY9 489 aaPredicted RBP22.39■■□□□ 1.17
XRCC1-205ENST00000595789 DDX17Q92841 729 aaKnown RBP22.38■■□□□ 1.17
XRCC1-205ENST00000595789 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
XRCC1-205ENST00000595789 LRRC59Q96AG4 307 aaKnown RBP22.37■■□□□ 1.17
XRCC1-205ENST00000595789 PTCH1Q13635 1447 aa22.36■■□□□ 1.17
XRCC1-205ENST00000595789 NHSL1Q5SYE7 1610 aa22.35■■□□□ 1.17
XRCC1-205ENST00000595789 SETD1AO15047 1707 aaKnown RBP22.35■■□□□ 1.17
XRCC1-205ENST00000595789 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
XRCC1-205ENST00000595789 NUTM2BA6NNL0 878 aaPredicted RBP22.35■■□□□ 1.17
XRCC1-205ENST00000595789 NUTM2EB1AL46 878 aaPredicted RBP22.35■■□□□ 1.17
XRCC1-205ENST00000595789 FOXD1Q16676 465 aa22.35■■□□□ 1.17
XRCC1-205ENST00000595789 NUTM2AQ8IVF1 878 aaPredicted RBP22.35■■□□□ 1.17
XRCC1-205ENST00000595789 NALCNQ8IZF0 1738 aa22.34■■□□□ 1.17
XRCC1-205ENST00000595789 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
XRCC1-205ENST00000595789 PNPLA6Q8IY17 1366 aa22.31■■□□□ 1.16
XRCC1-205ENST00000595789 ORAI2Q96SN7 254 aa22.3■■□□□ 1.16
XRCC1-205ENST00000595789 AFF2P51816 1311 aa22.29■■□□□ 1.16
XRCC1-205ENST00000595789 PPLO60437 1756 aa22.28■■□□□ 1.16
XRCC1-205ENST00000595789 SOS2Q07890 1332 aaPredicted RBP22.28■■□□□ 1.16
XRCC1-205ENST00000595789 ADGRF5Q8IZF2 1346 aa22.28■■□□□ 1.16
XRCC1-205ENST00000595789 RXRBP28702 533 aa22.27■■□□□ 1.16
XRCC1-205ENST00000595789 MPHOSPH9Q99550 1183 aa22.27■■□□□ 1.16
XRCC1-205ENST00000595789 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
XRCC1-205ENST00000595789 LAMC1P11047 1609 aa22.26■■□□□ 1.15
XRCC1-205ENST00000595789 UPF1Q92900 1129 aaKnown RBP eCLIP22.25■■□□□ 1.15
XRCC1-205ENST00000595789 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
XRCC1-205ENST00000595789 CCDC144AA2RUR9 1427 aa22.23■■□□□ 1.15
XRCC1-205ENST00000595789 CDK12Q9NYV4 1490 aaPredicted RBP22.22■■□□□ 1.15
XRCC1-205ENST00000595789 C8orf37Q96NL8 207 aa22.22■■□□□ 1.15
XRCC1-205ENST00000595789 ANKRD30BQ9BXX2 1392 aa22.21■■□□□ 1.15
XRCC1-205ENST00000595789 QTRT2Q9H974 415 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms