RNA–Protein interactions for RNA: ENST00000594617.7

PDE4C-207, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE4C, Length 4,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-207ENST00000594617 PANK1Q8TE04 598 aa19.24■□□□□ 0.67
PDE4C-207ENST00000594617 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
PDE4C-207ENST00000594617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDE4C-207ENST00000594617 FAM43AQ8N2R8 423 aa19.23■□□□□ 0.67
PDE4C-207ENST00000594617 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
PDE4C-207ENST00000594617 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
PDE4C-207ENST00000594617 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.22■□□□□ 0.67
PDE4C-207ENST00000594617 KIF3AQ9Y496 699 aa19.22■□□□□ 0.67
PDE4C-207ENST00000594617 FOXD4L5Q5VV16 416 aaPredicted RBP19.22■□□□□ 0.67
PDE4C-207ENST00000594617 FOXD4L4Q8WXT5 416 aaPredicted RBP19.22■□□□□ 0.67
PDE4C-207ENST00000594617 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
PDE4C-207ENST00000594617 RIPK4P57078 832 aa19.22■□□□□ 0.67
PDE4C-207ENST00000594617 ROCK1Q13464 1354 aa19.2■□□□□ 0.66
PDE4C-207ENST00000594617 NUTM2DQ5VT03 806 aaPredicted RBP19.2■□□□□ 0.66
PDE4C-207ENST00000594617 MSH5O43196 834 aa19.2■□□□□ 0.66
PDE4C-207ENST00000594617 NAIPQ13075 1403 aa19.19■□□□□ 0.66
PDE4C-207ENST00000594617 BRPF3Q9ULD4 1205 aa19.19■□□□□ 0.66
PDE4C-207ENST00000594617 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
PDE4C-207ENST00000594617 LNPKQ9C0E8 428 aa19.19■□□□□ 0.66
PDE4C-207ENST00000594617 TRAK2O60296 914 aa19.18■□□□□ 0.66
PDE4C-207ENST00000594617 NINLQ9Y2I6 1382 aa19.18■□□□□ 0.66
PDE4C-207ENST00000594617 INTS3Q68E01 1043 aaKnown RBP19.18■□□□□ 0.66
PDE4C-207ENST00000594617 CCDC34Q96HJ3 373 aa19.17■□□□□ 0.66
PDE4C-207ENST00000594617 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
PDE4C-207ENST00000594617 COG3Q96JB2 828 aa19.16■□□□□ 0.66
PDE4C-207ENST00000594617 IL27Q8NEV9 243 aa19.16■□□□□ 0.66
PDE4C-207ENST00000594617 HSP90B1P14625 803 aaKnown RBP19.16■□□□□ 0.66
PDE4C-207ENST00000594617 ISY1Q9ULR0 285 aaKnown RBP19.16■□□□□ 0.66
PDE4C-207ENST00000594617 AMPHP49418 695 aa19.15■□□□□ 0.66
PDE4C-207ENST00000594617 GNAI1P63096 354 aa19.15■□□□□ 0.66
PDE4C-207ENST00000594617 TCP11L2Q8N4U5 519 aa19.15■□□□□ 0.66
PDE4C-207ENST00000594617 CHMP4CQ96CF2 233 aa19.14■□□□□ 0.65
PDE4C-207ENST00000594617 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
PDE4C-207ENST00000594617 CDC45O75419 566 aa19.13■□□□□ 0.65
PDE4C-207ENST00000594617 SCAPERQ9BY12 1400 aa19.13■□□□□ 0.65
PDE4C-207ENST00000594617 RUFY2Q8WXA3 655 aa19.12■□□□□ 0.65
PDE4C-207ENST00000594617 NASPP49321 788 aaPredicted RBP19.12■□□□□ 0.65
PDE4C-207ENST00000594617 NBPF1Q3BBV0 1214 aa19.11■□□□□ 0.65
PDE4C-207ENST00000594617 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
PDE4C-207ENST00000594617 GOLGA6L19H0YKK7 550 aa19.1■□□□□ 0.65
PDE4C-207ENST00000594617 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
PDE4C-207ENST00000594617 MTHFSP49914 203 aa19.09■□□□□ 0.65
PDE4C-207ENST00000594617 MCTP1Q6DN14 999 aa19.09■□□□□ 0.65
PDE4C-207ENST00000594617 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
PDE4C-207ENST00000594617 FAM13BQ9NYF5 915 aa19.09■□□□□ 0.65
PDE4C-207ENST00000594617 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
PDE4C-207ENST00000594617 ZKSCAN1P17029 563 aaPredicted RBP19.08■□□□□ 0.64
PDE4C-207ENST00000594617 SF3A1Q15459 793 aaKnown RBP19.08■□□□□ 0.64
PDE4C-207ENST00000594617 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
PDE4C-207ENST00000594617 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
PDE4C-207ENST00000594617 CT47B1P0C2W7 299 aaPredicted RBP19.08■□□□□ 0.64
PDE4C-207ENST00000594617 GORABQ5T7V8 394 aa19.08■□□□□ 0.64
PDE4C-207ENST00000594617 MTERF4Q7Z6M4 381 aaKnown RBP19.07■□□□□ 0.64
PDE4C-207ENST00000594617 DAPK1P53355 1430 aa19.07■□□□□ 0.64
PDE4C-207ENST00000594617 BECN2A8MW95 431 aa19.07■□□□□ 0.64
PDE4C-207ENST00000594617 ANO2Q9NQ90 1003 aa19.07■□□□□ 0.64
PDE4C-207ENST00000594617 BCAR3O75815 825 aa19.07■□□□□ 0.64
PDE4C-207ENST00000594617 H3BQV1 296 aa19.07■□□□□ 0.64
PDE4C-207ENST00000594617 IFFO2Q5TF58 517 aa19.07■□□□□ 0.64
PDE4C-207ENST00000594617 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.643e-6■■■■□ 24.7
PDE4C-207ENST00000594617 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
PDE4C-207ENST00000594617 TPM2P07951 284 aa19.06■□□□□ 0.64
PDE4C-207ENST00000594617 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
PDE4C-207ENST00000594617 FAM184AQ8NB25 1140 aa19.05■□□□□ 0.64
PDE4C-207ENST00000594617 WDR63Q8IWG1 891 aa19.05■□□□□ 0.64
PDE4C-207ENST00000594617 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
PDE4C-207ENST00000594617 MBD3O95983 291 aa19.05■□□□□ 0.64
PDE4C-207ENST00000594617 TNNT3P45378 269 aaPredicted RBP19.05■□□□□ 0.64
PDE4C-207ENST00000594617 TROQ12816 1431 aaPredicted RBP19.05■□□□□ 0.64
PDE4C-207ENST00000594617 GCC1Q96CN9 775 aa19.04■□□□□ 0.64
PDE4C-207ENST00000594617 GRIN2BQ13224 1484 aa19.04■□□□□ 0.64
PDE4C-207ENST00000594617 CCDC39Q9UFE4 941 aa19.04■□□□□ 0.64
PDE4C-207ENST00000594617 RABEP1Q15276 862 aa19.04■□□□□ 0.64
PDE4C-207ENST00000594617 ANKRD30BQ9BXX2 1392 aa19.04■□□□□ 0.64
PDE4C-207ENST00000594617 NCOA1Q15788 1441 aa19.03■□□□□ 0.64
PDE4C-207ENST00000594617 ERBINQ96RT1 1412 aa19.03■□□□□ 0.64
PDE4C-207ENST00000594617 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
PDE4C-207ENST00000594617 CCDC173Q0VFZ6 552 aa19.03■□□□□ 0.64
PDE4C-207ENST00000594617 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
PDE4C-207ENST00000594617 EID1Q9Y6B2 187 aa19.02■□□□□ 0.64
PDE4C-207ENST00000594617 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
PDE4C-207ENST00000594617 EXOSC9Q06265 439 aaKnown RBP19.01■□□□□ 0.63
PDE4C-207ENST00000594617 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
PDE4C-207ENST00000594617 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
PDE4C-207ENST00000594617 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
PDE4C-207ENST00000594617 MCM2P49736 904 aa19.01■□□□□ 0.63
PDE4C-207ENST00000594617 GGNBP2Q9H3C7 697 aa19.01■□□□□ 0.63
PDE4C-207ENST00000594617 CIZ1Q9ULV3 898 aaPredicted RBP19.01■□□□□ 0.63
PDE4C-207ENST00000594617 SMC3Q9UQE7 1217 aa19.01■□□□□ 0.63
PDE4C-207ENST00000594617 GOLGA6L1Q8N7Z2 621 aa19.01■□□□□ 0.63
PDE4C-207ENST00000594617 SLFN5Q08AF3 891 aa19■□□□□ 0.63
PDE4C-207ENST00000594617 MCM4P33991 863 aa19■□□□□ 0.63
PDE4C-207ENST00000594617 HSP90AB4PQ58FF6 505 aa19■□□□□ 0.63
PDE4C-207ENST00000594617 CSB-PGBD3P0DP91 1061 aa18.99■□□□□ 0.63
PDE4C-207ENST00000594617 RNF20Q5VTR2 975 aa18.99■□□□□ 0.63
PDE4C-207ENST00000594617 PLEKHH2Q8IVE3 1493 aa18.98■□□□□ 0.63
PDE4C-207ENST00000594617 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
PDE4C-207ENST00000594617 FKBP5Q13451 457 aaPredicted RBP18.98■□□□□ 0.63
PDE4C-207ENST00000594617 MVPQ14764 893 aaKnown RBP18.98■□□□□ 0.63
PDE4C-207ENST00000594617 R3HCC1Q9Y3T6 440 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms