RNA–Protein interactions for RNA: ENST00000593129.1

RTN2-213, Transcript of reticulon 2, humanhuman

TSL 2

Gene RTN2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-213ENST00000593129 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
RTN2-213ENST00000593129 ILDR2Q71H61 639 aa15.29■□□□□ 0.04
RTN2-213ENST00000593129 MYO5BQ9ULV0 1848 aa15.28■□□□□ 0.04
RTN2-213ENST00000593129 RIMS2Q9UQ26 1411 aa15.27■□□□□ 0.04
RTN2-213ENST00000593129 XIRP1Q702N8 1843 aaKnown RBP15.27■□□□□ 0.03
RTN2-213ENST00000593129 PLEKHG1Q9ULL1 1385 aa15.26■□□□□ 0.03
RTN2-213ENST00000593129 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
RTN2-213ENST00000593129 NAIPQ13075 1403 aa15.26■□□□□ 0.03
RTN2-213ENST00000593129 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
RTN2-213ENST00000593129 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
RTN2-213ENST00000593129 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.24■□□□□ 0.03
RTN2-213ENST00000593129 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
RTN2-213ENST00000593129 TBX22Q9Y458 520 aa15.24■□□□□ 0.03
RTN2-213ENST00000593129 TMEM94Q12767 1356 aa15.24■□□□□ 0.03
RTN2-213ENST00000593129 RBM33Q96EV2 1170 aaKnown RBP15.23■□□□□ 0.03
RTN2-213ENST00000593129 BCANQ96GW7 911 aa15.23■□□□□ 0.03
RTN2-213ENST00000593129 NUTM2DQ5VT03 806 aaPredicted RBP15.22■□□□□ 0.03
RTN2-213ENST00000593129 PPP1R15AO75807 674 aaPredicted RBP15.21■□□□□ 0.03
RTN2-213ENST00000593129 ADAMTS13Q76LX8 1427 aa15.2■□□□□ 0.02
RTN2-213ENST00000593129 NWD1Q149M9 1564 aa15.19■□□□□ 0.02
RTN2-213ENST00000593129 HFM1A2PYH4 1435 aa15.18■□□□□ 0.02
RTN2-213ENST00000593129 CHD2O14647 1828 aaKnown RBP15.18■□□□□ 0.02
RTN2-213ENST00000593129 NKTRP30414 1462 aaKnown RBP15.18■□□□□ 0.02
RTN2-213ENST00000593129 FAM135BQ49AJ0 1406 aa15.17■□□□□ 0.02
RTN2-213ENST00000593129 SPHKAPQ2M3C7 1700 aa15.15■□□□□ 0.02
RTN2-213ENST00000593129 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
RTN2-213ENST00000593129 TRIM52Q96A61 297 aa15.14■□□□□ 0.01
RTN2-213ENST00000593129 PTPRUQ92729 1446 aa15.13■□□□□ 0.01
RTN2-213ENST00000593129 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
RTN2-213ENST00000593129 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
RTN2-213ENST00000593129 NCOA3Q9Y6Q9 1424 aa15.12■□□□□ 0.01
RTN2-213ENST00000593129 ZNF326Q5BKZ1 582 aaKnown RBP15.12■□□□□ 0.01
RTN2-213ENST00000593129 AMOTL2Q9Y2J4 779 aa15.12■□□□□ 0.01
RTN2-213ENST00000593129 CLTCL1P53675 1640 aa15.11■□□□□ 0.01
RTN2-213ENST00000593129 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
RTN2-213ENST00000593129 TRPM2O94759 1503 aa15.11■□□□□ 0.01
RTN2-213ENST00000593129 DIP2AQ14689 1571 aa15.11■□□□□ 0.01
RTN2-213ENST00000593129 MSH6P52701 1360 aa15.11■□□□□ 0.01
RTN2-213ENST00000593129 NRXN3Q9Y4C0 1643 aa15.09■□□□□ 0.01
RTN2-213ENST00000593129 SETBP1Q9Y6X0 1596 aa15.08■□□□□ 0
RTN2-213ENST00000593129 C19orf44Q9H6X5 657 aa15.08■□□□□ 0
RTN2-213ENST00000593129 METP08581 1390 aa15.08■□□□□ 0
RTN2-213ENST00000593129 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
RTN2-213ENST00000593129 ROBO1Q9Y6N7 1651 aa15.06■□□□□ 0
RTN2-213ENST00000593129 FOXD1Q16676 465 aa15.06■□□□□ 0
RTN2-213ENST00000593129 MPHOSPH9Q99550 1183 aa15.05■□□□□ -0
RTN2-213ENST00000593129 KIF1BO60333 1816 aa15.04■□□□□ -0
RTN2-213ENST00000593129 RPGRIP1LQ68CZ1 1315 aa15.04■□□□□ -0
RTN2-213ENST00000593129 VGFO15240 615 aaPredicted RBP15.04■□□□□ -0
RTN2-213ENST00000593129 C14orf37Q86TY3 774 aa15.04■□□□□ -0
RTN2-213ENST00000593129 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
RTN2-213ENST00000593129 RGS17Q9UGC6 210 aaPredicted RBP15.04■□□□□ -0
RTN2-213ENST00000593129 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
RTN2-213ENST00000593129 XRN1Q8IZH2 1706 aaKnown RBP15.03■□□□□ -0
RTN2-213ENST00000593129 ATF3P18847 181 aa15.02■□□□□ -0
RTN2-213ENST00000593129 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
RTN2-213ENST00000593129 BRINP3Q76B58 766 aa14.98□□□□□ -0.01
RTN2-213ENST00000593129 DCCP43146 1447 aa14.98□□□□□ -0.01
RTN2-213ENST00000593129 SPATA31E1Q6ZUB1 1445 aa14.97□□□□□ -0.01
RTN2-213ENST00000593129 SETD5Q9C0A6 1442 aa14.97□□□□□ -0.01
RTN2-213ENST00000593129 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
RTN2-213ENST00000593129 ADGRF5Q8IZF2 1346 aa14.96□□□□□ -0.01
RTN2-213ENST00000593129 SETD1AO15047 1707 aaKnown RBP14.96□□□□□ -0.01
RTN2-213ENST00000593129 JCADQ9P266 1359 aa14.96□□□□□ -0.02
RTN2-213ENST00000593129 PPLO60437 1756 aa14.96□□□□□ -0.02
RTN2-213ENST00000593129 COL16A1Q07092 1604 aaPredicted RBP14.95□□□□□ -0.02
RTN2-213ENST00000593129 ACIN1Q9UKV3 1341 aaKnown RBP14.95□□□□□ -0.02
RTN2-213ENST00000593129 MST1RQ04912 1400 aa14.95□□□□□ -0.02
RTN2-213ENST00000593129 RGL3Q3MIN7 710 aa14.95□□□□□ -0.02
RTN2-213ENST00000593129 ROBO2Q9HCK4 1378 aa14.95□□□□□ -0.02
RTN2-213ENST00000593129 CCDC144AA2RUR9 1427 aa14.94□□□□□ -0.02
RTN2-213ENST00000593129 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
RTN2-213ENST00000593129 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
RTN2-213ENST00000593129 AHDC1Q5TGY3 1603 aaPredicted RBP14.93□□□□□ -0.02
RTN2-213ENST00000593129 POTEAQ6S8J7 498 aa14.93□□□□□ -0.02
RTN2-213ENST00000593129 PTCH1Q13635 1447 aa14.92□□□□□ -0.02
RTN2-213ENST00000593129 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
RTN2-213ENST00000593129 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
RTN2-213ENST00000593129 SPATA31A6Q5VVP1 1343 aa14.9□□□□□ -0.02
RTN2-213ENST00000593129 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
RTN2-213ENST00000593129 ASXL1Q8IXJ9 1541 aa14.89□□□□□ -0.03
RTN2-213ENST00000593129 C1orf167Q5SNV9 1468 aa14.89□□□□□ -0.03
RTN2-213ENST00000593129 DDX17Q92841 729 aaKnown RBP14.88□□□□□ -0.03
RTN2-213ENST00000593129 IFT172Q9UG01 1749 aa14.87□□□□□ -0.03
RTN2-213ENST00000593129 HRCP23327 699 aa14.87□□□□□ -0.03
RTN2-213ENST00000593129 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
RTN2-213ENST00000593129 ORAI2Q96SN7 254 aa14.87□□□□□ -0.03
RTN2-213ENST00000593129 LRP6O75581 1613 aa14.87□□□□□ -0.03
RTN2-213ENST00000593129 LRRC59Q96AG4 307 aaKnown RBP14.86□□□□□ -0.03
RTN2-213ENST00000593129 C14orf93Q9H972 538 aaKnown RBP14.86□□□□□ -0.03
RTN2-213ENST00000593129 STK26Q9P289 416 aa14.86□□□□□ -0.03
RTN2-213ENST00000593129 LRPPRCP42704 1394 aaKnown RBP14.85□□□□□ -0.03
RTN2-213ENST00000593129 ABCC11Q96J66 1382 aa14.85□□□□□ -0.03
RTN2-213ENST00000593129 TECPR2O15040 1411 aa14.85□□□□□ -0.03
RTN2-213ENST00000593129 PIK3C2GO75747 1445 aa14.85□□□□□ -0.03
RTN2-213ENST00000593129 WAPLQ7Z5K2 1190 aa14.85□□□□□ -0.03
RTN2-213ENST00000593129 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
RTN2-213ENST00000593129 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
RTN2-213ENST00000593129 NRXN1Q9ULB1 1477 aa14.83□□□□□ -0.03
RTN2-213ENST00000593129 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms