RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 NKTRP30414 1462 aaKnown RBP30.68■■■□□ 2.5
PRKCSH-216ENST00000592445 NWD1Q149M9 1564 aa30.64■■■□□ 2.5
PRKCSH-216ENST00000592445 SLAIN2Q9P270 581 aa30.64■■■□□ 2.5
PRKCSH-216ENST00000592445 PPP1R15AO75807 674 aaPredicted RBP30.61■■■□□ 2.49
PRKCSH-216ENST00000592445 JCADQ9P266 1359 aa30.58■■■□□ 2.49
PRKCSH-216ENST00000592445 HDGFP51858 240 aaKnown RBP30.58■■■□□ 2.49
PRKCSH-216ENST00000592445 PHLPP1O60346 1717 aa30.57■■■□□ 2.48
PRKCSH-216ENST00000592445 PLEKHG1Q9ULL1 1385 aa30.56■■■□□ 2.48
PRKCSH-216ENST00000592445 RPRD2Q5VT52 1461 aaKnown RBP30.56■■■□□ 2.48
PRKCSH-216ENST00000592445 ZFYVE9O95405 1425 aa30.54■■■□□ 2.48
PRKCSH-216ENST00000592445 ADGRL2O95490 1459 aa30.53■■■□□ 2.48
PRKCSH-216ENST00000592445 C14orf37Q86TY3 774 aa30.53■■■□□ 2.48
PRKCSH-216ENST00000592445 RIMS2Q9UQ26 1411 aa30.53■■■□□ 2.48
PRKCSH-216ENST00000592445 FAM50AQ14320 339 aaKnown RBP30.52■■■□□ 2.48
PRKCSH-216ENST00000592445 ANKRD50Q9ULJ7 1429 aa30.51■■■□□ 2.47
PRKCSH-216ENST00000592445 CHGAP10645 457 aaKnown RBP30.49■■■□□ 2.47
PRKCSH-216ENST00000592445 CHD2O14647 1828 aaKnown RBP30.49■■■□□ 2.47
PRKCSH-216ENST00000592445 TBX22Q9Y458 520 aa30.48■■■□□ 2.47
PRKCSH-216ENST00000592445 MYO5BQ9ULV0 1848 aa30.47■■■□□ 2.47
PRKCSH-216ENST00000592445 GCC2Q8IWJ2 1684 aa30.46■■■□□ 2.47
PRKCSH-216ENST00000592445 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.46■■■□□ 2.47
PRKCSH-216ENST00000592445 SETD1AO15047 1707 aaKnown RBP30.46■■■□□ 2.47
PRKCSH-216ENST00000592445 TMEM131LA2VDJ0 1609 aa30.45■■■□□ 2.47
PRKCSH-216ENST00000592445 MEX3CQ5U5Q3 659 aaKnown RBP30.45■■■□□ 2.47
PRKCSH-216ENST00000592445 NCOA3Q9Y6Q9 1424 aa30.45■■■□□ 2.46
PRKCSH-216ENST00000592445 NUTM2DQ5VT03 806 aaPredicted RBP30.43■■■□□ 2.46
PRKCSH-216ENST00000592445 COL16A1Q07092 1604 aaPredicted RBP30.43■■■□□ 2.46
PRKCSH-216ENST00000592445 SPATA31A6Q5VVP1 1343 aa30.42■■■□□ 2.46
PRKCSH-216ENST00000592445 ATF3P18847 181 aa30.41■■■□□ 2.46
PRKCSH-216ENST00000592445 CADPS2Q86UW7 1296 aa30.41■■■□□ 2.46
PRKCSH-216ENST00000592445 C19orf44Q9H6X5 657 aa30.39■■■□□ 2.46
PRKCSH-216ENST00000592445 ZNF772Q68DY9 489 aaPredicted RBP30.38■■■□□ 2.45
PRKCSH-216ENST00000592445 LRP6O75581 1613 aa30.37■■■□□ 2.45
PRKCSH-216ENST00000592445 ADAMTS13Q76LX8 1427 aa30.36■■■□□ 2.45
PRKCSH-216ENST00000592445 PIK3R4Q99570 1358 aa30.34■■■□□ 2.45
PRKCSH-216ENST00000592445 TRIM52Q96A61 297 aa30.34■■■□□ 2.45
PRKCSH-216ENST00000592445 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.33■■■□□ 2.45
PRKCSH-216ENST00000592445 DIP2AQ14689 1571 aa30.33■■■□□ 2.45
PRKCSH-216ENST00000592445 AHDC1Q5TGY3 1603 aaPredicted RBP30.32■■■□□ 2.44
PRKCSH-216ENST00000592445 UNC13BO14795 1591 aa30.31■■■□□ 2.44
PRKCSH-216ENST00000592445 AMOTL2Q9Y2J4 779 aa30.3■■■□□ 2.44
PRKCSH-216ENST00000592445 E9PCH4 1651 aa30.28■■■□□ 2.44
PRKCSH-216ENST00000592445 UPF1Q92900 1129 aaKnown RBP eCLIP30.28■■■□□ 2.44
PRKCSH-216ENST00000592445 SHPRHQ149N8 1683 aa30.27■■■□□ 2.44
PRKCSH-216ENST00000592445 TRPM2O94759 1503 aa30.27■■■□□ 2.44
PRKCSH-216ENST00000592445 NUTM2BA6NNL0 878 aaPredicted RBP30.26■■■□□ 2.43
PRKCSH-216ENST00000592445 NUTM2EB1AL46 878 aaPredicted RBP30.26■■■□□ 2.43
PRKCSH-216ENST00000592445 BRINP3Q76B58 766 aa30.26■■■□□ 2.43
PRKCSH-216ENST00000592445 NUTM2AQ8IVF1 878 aaPredicted RBP30.26■■■□□ 2.43
PRKCSH-216ENST00000592445 RXRBP28702 533 aa30.24■■■□□ 2.43
PRKCSH-216ENST00000592445 PTPRUQ92729 1446 aa30.22■■■□□ 2.43
PRKCSH-216ENST00000592445 NUP155O75694 1391 aa30.2■■■□□ 2.43
PRKCSH-216ENST00000592445 IQGAP3Q86VI3 1631 aa30.2■■■□□ 2.43
PRKCSH-216ENST00000592445 ROCK1Q13464 1354 aa30.19■■■□□ 2.42
PRKCSH-216ENST00000592445 DCCP43146 1447 aa30.17■■■□□ 2.42
PRKCSH-216ENST00000592445 ASXL1Q8IXJ9 1541 aa30.15■■■□□ 2.42
PRKCSH-216ENST00000592445 AFF2P51816 1311 aa30.15■■■□□ 2.42
PRKCSH-216ENST00000592445 ZNF326Q5BKZ1 582 aaKnown RBP30.13■■■□□ 2.41
PRKCSH-216ENST00000592445 ITGAEP38570 1179 aa30.12■■■□□ 2.41
PRKCSH-216ENST00000592445 SETD5Q9C0A6 1442 aa30.12■■■□□ 2.41
PRKCSH-216ENST00000592445 LRRC59Q96AG4 307 aaKnown RBP30.11■■■□□ 2.41
PRKCSH-216ENST00000592445 MST1RQ04912 1400 aa30.11■■■□□ 2.41
PRKCSH-216ENST00000592445 CDK12Q9NYV4 1490 aaPredicted RBP30.11■■■□□ 2.41
PRKCSH-216ENST00000592445 XRN1Q8IZH2 1706 aaKnown RBP30.09■■■□□ 2.41
PRKCSH-216ENST00000592445 SETBP1Q9Y6X0 1596 aa30.09■■■□□ 2.41
PRKCSH-216ENST00000592445 NRXN3Q9Y4C0 1643 aa30.07■■■□□ 2.4
PRKCSH-216ENST00000592445 METP08581 1390 aa30.07■■■□□ 2.4
PRKCSH-216ENST00000592445 C8orf37Q96NL8 207 aa30.07■■■□□ 2.4
PRKCSH-216ENST00000592445 NHSL1Q5SYE7 1610 aa30.05■■■□□ 2.4
PRKCSH-216ENST00000592445 DDX17Q92841 729 aaKnown RBP30.04■■■□□ 2.4
PRKCSH-216ENST00000592445 QTRT2Q9H974 415 aaKnown RBP30.03■■■□□ 2.4
PRKCSH-216ENST00000592445 ADGRL3Q9HAR2 1447 aa30.01■■■□□ 2.39
PRKCSH-216ENST00000592445 SPHKAPQ2M3C7 1700 aa30■■■□□ 2.39
PRKCSH-216ENST00000592445 RBM6P78332 1123 aaKnown RBP30■■■□□ 2.39
PRKCSH-216ENST00000592445 PNPLA6Q8IY17 1366 aa30■■■□□ 2.39
PRKCSH-216ENST00000592445 RGS12O14924 1447 aa29.96■■■□□ 2.39
PRKCSH-216ENST00000592445 NGLY1Q96IV0 654 aa29.96■■■□□ 2.39
PRKCSH-216ENST00000592445 ADAMTS2O95450 1211 aa29.95■■■□□ 2.39
PRKCSH-216ENST00000592445 NALCNQ8IZF0 1738 aa29.92■■■□□ 2.38
PRKCSH-216ENST00000592445 C1orf167Q5SNV9 1468 aa29.91■■■□□ 2.38
PRKCSH-216ENST00000592445 NEXMIFQ5QGS0 1516 aa29.91■■■□□ 2.38
PRKCSH-216ENST00000592445 CLTCL1P53675 1640 aa29.88■■■□□ 2.37
PRKCSH-216ENST00000592445 PPARGC1BQ86YN6 1023 aaKnown RBP29.85■■■□□ 2.37
PRKCSH-216ENST00000592445 USP21Q9UK80 565 aa29.85■■■□□ 2.37
PRKCSH-216ENST00000592445 ORAI2Q96SN7 254 aa29.84■■■□□ 2.37
PRKCSH-216ENST00000592445 SOS2Q07890 1332 aaPredicted RBP29.83■■■□□ 2.37
PRKCSH-216ENST00000592445 PTCH1Q13635 1447 aa29.82■■■□□ 2.36
PRKCSH-216ENST00000592445 ATAD2Q6PL18 1390 aa29.82■■■□□ 2.36
PRKCSH-216ENST00000592445 VGFO15240 615 aaPredicted RBP29.82■■■□□ 2.36
PRKCSH-216ENST00000592445 ROBO2Q9HCK4 1378 aa29.81■■■□□ 2.36
PRKCSH-216ENST00000592445 TRPC5Q9UL62 973 aaPredicted RBP29.81■■■□□ 2.36
PRKCSH-216ENST00000592445 KIF1BO60333 1816 aa29.8■■■□□ 2.36
PRKCSH-216ENST00000592445 SRCAPQ6ZRS2 3230 aa29.8■■■□□ 2.36
PRKCSH-216ENST00000592445 LAMC1P11047 1609 aa29.78■■■□□ 2.36
PRKCSH-216ENST00000592445 FNBP4Q8N3X1 1017 aaPredicted RBP29.75■■■□□ 2.35
PRKCSH-216ENST00000592445 FOXD1Q16676 465 aa29.72■■■□□ 2.35
PRKCSH-216ENST00000592445 RPGRIP1LQ68CZ1 1315 aa29.71■■■□□ 2.35
PRKCSH-216ENST00000592445 HFM1A2PYH4 1435 aa29.71■■■□□ 2.35
PRKCSH-216ENST00000592445 ESCO1Q5FWF5 840 aa29.7■■■□□ 2.35
PRKCSH-216ENST00000592445 ATRNO75882 1429 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms