RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 SOCS7O14512 581 aa28.05■■■□□ 2.08
CIRBP-237ENST00000592234 MED1Q15648 1581 aaPredicted RBP28.04■■■□□ 2.08
CIRBP-237ENST00000592234 KCNA6P17658 529 aa28.04■■■□□ 2.08
CIRBP-237ENST00000592234 SENP3Q9H4L4 574 aaPredicted RBP28.04■■■□□ 2.08
CIRBP-237ENST00000592234 ZFYVE9O95405 1425 aa28.02■■■□□ 2.08
CIRBP-237ENST00000592234 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.08
CIRBP-237ENST00000592234 NUP155O75694 1391 aa28.01■■■□□ 2.07
CIRBP-237ENST00000592234 HDGFP51858 240 aaKnown RBP28.01■■■□□ 2.07
CIRBP-237ENST00000592234 PPP1R15AO75807 674 aaPredicted RBP28■■■□□ 2.07
CIRBP-237ENST00000592234 CHGAP10645 457 aaKnown RBP28■■■□□ 2.07
CIRBP-237ENST00000592234 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
CIRBP-237ENST00000592234 NWD1Q149M9 1564 aa27.99■■■□□ 2.07
CIRBP-237ENST00000592234 PROSER2Q86WR7 435 aaPredicted RBP27.98■■■□□ 2.07
CIRBP-237ENST00000592234 PLEKHG1Q9ULL1 1385 aa27.98■■■□□ 2.07
CIRBP-237ENST00000592234 NKTRP30414 1462 aaKnown RBP27.96■■■□□ 2.07
CIRBP-237ENST00000592234 CHD2O14647 1828 aaKnown RBP27.95■■■□□ 2.07
CIRBP-237ENST00000592234 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.94■■■□□ 2.06
CIRBP-237ENST00000592234 RBM33Q96EV2 1170 aaKnown RBP27.93■■■□□ 2.06
CIRBP-237ENST00000592234 RRBP1Q9P2E9 1410 aaKnown RBP27.9■■■□□ 2.06
CIRBP-237ENST00000592234 SPHKAPQ2M3C7 1700 aa27.89■■■□□ 2.06
CIRBP-237ENST00000592234 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
CIRBP-237ENST00000592234 FAM135BQ49AJ0 1406 aa27.88■■■□□ 2.05
CIRBP-237ENST00000592234 PHF23Q9BUL5 403 aaPredicted RBP27.87■■■□□ 2.05
CIRBP-237ENST00000592234 TBX22Q9Y458 520 aa27.87■■■□□ 2.05
CIRBP-237ENST00000592234 ROBO1Q9Y6N7 1651 aa27.86■■■□□ 2.05
CIRBP-237ENST00000592234 MSH6P52701 1360 aa27.86■■■□□ 2.05
CIRBP-237ENST00000592234 DIP2AQ14689 1571 aa27.85■■■□□ 2.05
CIRBP-237ENST00000592234 ADAMTS13Q76LX8 1427 aa27.83■■■□□ 2.05
CIRBP-237ENST00000592234 NAIPQ13075 1403 aa27.78■■■□□ 2.04
CIRBP-237ENST00000592234 PIK3R4Q99570 1358 aa27.77■■■□□ 2.04
CIRBP-237ENST00000592234 TRPM2O94759 1503 aa27.77■■■□□ 2.04
CIRBP-237ENST00000592234 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
CIRBP-237ENST00000592234 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
CIRBP-237ENST00000592234 C14orf37Q86TY3 774 aa27.74■■■□□ 2.03
CIRBP-237ENST00000592234 SLAIN2Q9P270 581 aa27.74■■■□□ 2.03
CIRBP-237ENST00000592234 KIF1BO60333 1816 aa27.73■■■□□ 2.03
CIRBP-237ENST00000592234 CLTCL1P53675 1640 aa27.73■■■□□ 2.03
CIRBP-237ENST00000592234 NRXN3Q9Y4C0 1643 aa27.71■■■□□ 2.03
CIRBP-237ENST00000592234 PHLPP1O60346 1717 aa27.71■■■□□ 2.03
CIRBP-237ENST00000592234 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.7■■■□□ 2.03
CIRBP-237ENST00000592234 AMOTL2Q9Y2J4 779 aa27.69■■■□□ 2.02
CIRBP-237ENST00000592234 SETBP1Q9Y6X0 1596 aa27.69■■■□□ 2.02
CIRBP-237ENST00000592234 HFM1A2PYH4 1435 aa27.68■■■□□ 2.02
CIRBP-237ENST00000592234 TRIM52Q96A61 297 aa27.68■■■□□ 2.02
CIRBP-237ENST00000592234 PTPRUQ92729 1446 aa27.67■■■□□ 2.02
CIRBP-237ENST00000592234 C19orf44Q9H6X5 657 aa27.65■■■□□ 2.02
CIRBP-237ENST00000592234 NEXMIFQ5QGS0 1516 aa27.64■■■□□ 2.02
CIRBP-237ENST00000592234 CADPS2Q86UW7 1296 aa27.64■■■□□ 2.02
CIRBP-237ENST00000592234 XRN1Q8IZH2 1706 aaKnown RBP27.64■■■□□ 2.01
CIRBP-237ENST00000592234 ATF3P18847 181 aa27.63■■■□□ 2.01
CIRBP-237ENST00000592234 RGS17Q9UGC6 210 aaPredicted RBP27.6■■■□□ 2.01
CIRBP-237ENST00000592234 SLC4A1APQ9BWU0 796 aaKnown RBP27.59■■■□□ 2.01
CIRBP-237ENST00000592234 COL16A1Q07092 1604 aaPredicted RBP27.58■■■□□ 2.01
CIRBP-237ENST00000592234 METP08581 1390 aa27.58■■■□□ 2.01
CIRBP-237ENST00000592234 JCADQ9P266 1359 aa27.58■■■□□ 2.01
CIRBP-237ENST00000592234 AHDC1Q5TGY3 1603 aaPredicted RBP27.53■■■□□ 2
CIRBP-237ENST00000592234 DCCP43146 1447 aa27.53■■■□□ 2
CIRBP-237ENST00000592234 VGFO15240 615 aaPredicted RBP27.5■■□□□ 1.99
CIRBP-237ENST00000592234 PPLO60437 1756 aa27.49■■□□□ 1.99
CIRBP-237ENST00000592234 SETD1AO15047 1707 aaKnown RBP27.48■■□□□ 1.99
CIRBP-237ENST00000592234 BRINP3Q76B58 766 aa27.48■■□□□ 1.99
CIRBP-237ENST00000592234 RPGRIP1LQ68CZ1 1315 aa27.47■■□□□ 1.99
CIRBP-237ENST00000592234 NALCNQ8IZF0 1738 aa27.47■■□□□ 1.99
CIRBP-237ENST00000592234 POTEAQ6S8J7 498 aa27.46■■□□□ 1.99
CIRBP-237ENST00000592234 SHPRHQ149N8 1683 aa27.46■■□□□ 1.99
CIRBP-237ENST00000592234 MST1RQ04912 1400 aa27.45■■□□□ 1.98
CIRBP-237ENST00000592234 ADGRL3Q9HAR2 1447 aa27.45■■□□□ 1.98
CIRBP-237ENST00000592234 FOXD1Q16676 465 aa27.45■■□□□ 1.98
CIRBP-237ENST00000592234 SPATA31A6Q5VVP1 1343 aa27.43■■□□□ 1.98
CIRBP-237ENST00000592234 ASXL1Q8IXJ9 1541 aa27.43■■□□□ 1.98
CIRBP-237ENST00000592234 NHSL1Q5SYE7 1610 aa27.41■■□□□ 1.98
CIRBP-237ENST00000592234 LRP6O75581 1613 aa27.4■■□□□ 1.98
CIRBP-237ENST00000592234 PTCH1Q13635 1447 aa27.4■■□□□ 1.98
CIRBP-237ENST00000592234 MEX3CQ5U5Q3 659 aaKnown RBP27.39■■□□□ 1.98
CIRBP-237ENST00000592234 CCDC144AA2RUR9 1427 aa27.39■■□□□ 1.97
CIRBP-237ENST00000592234 MPHOSPH9Q99550 1183 aa27.37■■□□□ 1.97
CIRBP-237ENST00000592234 ROBO2Q9HCK4 1378 aa27.35■■□□□ 1.97
CIRBP-237ENST00000592234 IFT172Q9UG01 1749 aa27.33■■□□□ 1.96
CIRBP-237ENST00000592234 PRAG1Q86YV5 1406 aa27.33■■□□□ 1.96
CIRBP-237ENST00000592234 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.96
CIRBP-237ENST00000592234 RGL3Q3MIN7 710 aa27.32■■□□□ 1.96
CIRBP-237ENST00000592234 C1orf167Q5SNV9 1468 aa27.31■■□□□ 1.96
CIRBP-237ENST00000592234 LRRC59Q96AG4 307 aaKnown RBP27.3■■□□□ 1.96
CIRBP-237ENST00000592234 SPATA31E1Q6ZUB1 1445 aa27.3■■□□□ 1.96
CIRBP-237ENST00000592234 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
CIRBP-237ENST00000592234 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
CIRBP-237ENST00000592234 NUTM2AQ8IVF1 878 aaPredicted RBP27.29■■□□□ 1.96
CIRBP-237ENST00000592234 DDX17Q92841 729 aaKnown RBP27.29■■□□□ 1.96
CIRBP-237ENST00000592234 ADGRF5Q8IZF2 1346 aa27.29■■□□□ 1.96
CIRBP-237ENST00000592234 ACIN1Q9UKV3 1341 aaKnown RBP27.28■■□□□ 1.96
CIRBP-237ENST00000592234 ZNF772Q68DY9 489 aaPredicted RBP27.28■■□□□ 1.96
CIRBP-237ENST00000592234 ANKRD30BQ9BXX2 1392 aa27.27■■□□□ 1.96
CIRBP-237ENST00000592234 LAMC1P11047 1609 aa27.23■■□□□ 1.95
CIRBP-237ENST00000592234 PNPLA6Q8IY17 1366 aa27.22■■□□□ 1.95
CIRBP-237ENST00000592234 ORAI2Q96SN7 254 aa27.21■■□□□ 1.95
CIRBP-237ENST00000592234 KNDC1Q76NI1 1749 aa27.19■■□□□ 1.94
CIRBP-237ENST00000592234 CDC42BPGQ6DT37 1551 aa27.19■■□□□ 1.94
CIRBP-237ENST00000592234 STK26Q9P289 416 aa27.19■■□□□ 1.94
CIRBP-237ENST00000592234 PIK3C2GO75747 1445 aa27.18■■□□□ 1.94
CIRBP-237ENST00000592234 LRPPRCP42704 1394 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms