RNA–Protein interactions for RNA: ENST00000590810.5

TCF4-247, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-247ENST00000590810 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
TCF4-247ENST00000590810 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
TCF4-247ENST00000590810 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
TCF4-247ENST00000590810 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
TCF4-247ENST00000590810 E9PCH4 1651 aa12.91□□□□□ -0.34
TCF4-247ENST00000590810 UNC13BO14795 1591 aa12.9□□□□□ -0.34
TCF4-247ENST00000590810 KCNA6P17658 529 aa12.9□□□□□ -0.34
TCF4-247ENST00000590810 TMEM131LA2VDJ0 1609 aa12.9□□□□□ -0.34
TCF4-247ENST00000590810 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
TCF4-247ENST00000590810 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
TCF4-247ENST00000590810 SETD1AO15047 1707 aaKnown RBP12.89□□□□□ -0.35
TCF4-247ENST00000590810 NUTM2DQ5VT03 806 aaPredicted RBP12.89□□□□□ -0.35
TCF4-247ENST00000590810 RIMS2Q9UQ26 1411 aa12.88□□□□□ -0.35
TCF4-247ENST00000590810 ITGAEP38570 1179 aa12.88□□□□□ -0.35
TCF4-247ENST00000590810 RPRD2Q5VT52 1461 aaKnown RBP12.88□□□□□ -0.35
TCF4-247ENST00000590810 ZFYVE9O95405 1425 aa12.88□□□□□ -0.35
TCF4-247ENST00000590810 MSH6P52701 1360 aa12.87□□□□□ -0.35
TCF4-247ENST00000590810 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
TCF4-247ENST00000590810 FAM135BQ49AJ0 1406 aa12.87□□□□□ -0.35
TCF4-247ENST00000590810 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
TCF4-247ENST00000590810 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
TCF4-247ENST00000590810 IQGAP3Q86VI3 1631 aa12.86□□□□□ -0.35
TCF4-247ENST00000590810 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
TCF4-247ENST00000590810 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.82□□□□□ -0.36
TCF4-247ENST00000590810 COL16A1Q07092 1604 aaPredicted RBP12.82□□□□□ -0.36
TCF4-247ENST00000590810 POTEAQ6S8J7 498 aa12.82□□□□□ -0.36
TCF4-247ENST00000590810 SPHKAPQ2M3C7 1700 aa12.82□□□□□ -0.36
TCF4-247ENST00000590810 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
TCF4-247ENST00000590810 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
TCF4-247ENST00000590810 NUP155O75694 1391 aa12.8□□□□□ -0.36
TCF4-247ENST00000590810 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
TCF4-247ENST00000590810 TRPM2O94759 1503 aa12.78□□□□□ -0.36
TCF4-247ENST00000590810 HDGFP51858 240 aaKnown RBP12.78□□□□□ -0.36
TCF4-247ENST00000590810 LRP6O75581 1613 aa12.77□□□□□ -0.36
TCF4-247ENST00000590810 NRXN3Q9Y4C0 1643 aa12.77□□□□□ -0.36
TCF4-247ENST00000590810 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
TCF4-247ENST00000590810 ROCK1Q13464 1354 aa12.77□□□□□ -0.37
TCF4-247ENST00000590810 JCADQ9P266 1359 aa12.77□□□□□ -0.37
TCF4-247ENST00000590810 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
TCF4-247ENST00000590810 ATF3P18847 181 aa12.75□□□□□ -0.37
TCF4-247ENST00000590810 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
TCF4-247ENST00000590810 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
TCF4-247ENST00000590810 XRN1Q8IZH2 1706 aaKnown RBP12.75□□□□□ -0.37
TCF4-247ENST00000590810 PTPRUQ92729 1446 aa12.75□□□□□ -0.37
TCF4-247ENST00000590810 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
TCF4-247ENST00000590810 CLTCL1P53675 1640 aa12.74□□□□□ -0.37
TCF4-247ENST00000590810 AHDC1Q5TGY3 1603 aaPredicted RBP12.74□□□□□ -0.37
TCF4-247ENST00000590810 AMOTL2Q9Y2J4 779 aa12.73□□□□□ -0.37
TCF4-247ENST00000590810 KIF1BO60333 1816 aa12.73□□□□□ -0.37
TCF4-247ENST00000590810 NALCNQ8IZF0 1738 aa12.72□□□□□ -0.37
TCF4-247ENST00000590810 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
TCF4-247ENST00000590810 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
TCF4-247ENST00000590810 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
TCF4-247ENST00000590810 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
TCF4-247ENST00000590810 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
TCF4-247ENST00000590810 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
TCF4-247ENST00000590810 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
TCF4-247ENST00000590810 PIK3R4Q99570 1358 aa12.7□□□□□ -0.38
TCF4-247ENST00000590810 C19orf44Q9H6X5 657 aa12.7□□□□□ -0.38
TCF4-247ENST00000590810 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
TCF4-247ENST00000590810 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
TCF4-247ENST00000590810 NEXMIFQ5QGS0 1516 aa12.69□□□□□ -0.38
TCF4-247ENST00000590810 BRINP3Q76B58 766 aa12.69□□□□□ -0.38
TCF4-247ENST00000590810 METP08581 1390 aa12.69□□□□□ -0.38
TCF4-247ENST00000590810 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
TCF4-247ENST00000590810 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
TCF4-247ENST00000590810 MST1RQ04912 1400 aa12.67□□□□□ -0.38
TCF4-247ENST00000590810 RRBP1Q9P2E9 1410 aaKnown RBP12.66□□□□□ -0.38
TCF4-247ENST00000590810 DCCP43146 1447 aa12.65□□□□□ -0.38
TCF4-247ENST00000590810 ADGRL3Q9HAR2 1447 aa12.64□□□□□ -0.39
TCF4-247ENST00000590810 ZNF772Q68DY9 489 aaPredicted RBP12.64□□□□□ -0.39
TCF4-247ENST00000590810 PPLO60437 1756 aa12.63□□□□□ -0.39
TCF4-247ENST00000590810 AFF2P51816 1311 aa12.62□□□□□ -0.39
TCF4-247ENST00000590810 NAIPQ13075 1403 aa12.62□□□□□ -0.39
TCF4-247ENST00000590810 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
TCF4-247ENST00000590810 RXRBP28702 533 aa12.6□□□□□ -0.39
TCF4-247ENST00000590810 SETD5Q9C0A6 1442 aa12.6□□□□□ -0.39
TCF4-247ENST00000590810 PNPLA6Q8IY17 1366 aa12.59□□□□□ -0.39
TCF4-247ENST00000590810 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
TCF4-247ENST00000590810 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
TCF4-247ENST00000590810 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
TCF4-247ENST00000590810 UPF1Q92900 1129 aaKnown RBP eCLIP12.58□□□□□ -0.4
TCF4-247ENST00000590810 PTCH1Q13635 1447 aa12.57□□□□□ -0.4
TCF4-247ENST00000590810 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
TCF4-247ENST00000590810 FOXD1Q16676 465 aa12.57□□□□□ -0.4
TCF4-247ENST00000590810 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
TCF4-247ENST00000590810 RGS12O14924 1447 aa12.56□□□□□ -0.4
TCF4-247ENST00000590810 ORAI2Q96SN7 254 aa12.56□□□□□ -0.4
TCF4-247ENST00000590810 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
TCF4-247ENST00000590810 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
TCF4-247ENST00000590810 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
TCF4-247ENST00000590810 LAMC1P11047 1609 aa12.54□□□□□ -0.4
TCF4-247ENST00000590810 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
TCF4-247ENST00000590810 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
TCF4-247ENST00000590810 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
TCF4-247ENST00000590810 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
TCF4-247ENST00000590810 QTRT2Q9H974 415 aaKnown RBP12.53□□□□□ -0.4
TCF4-247ENST00000590810 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
TCF4-247ENST00000590810 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.4
TCF4-247ENST00000590810 STK26Q9P289 416 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms