RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 ONECUT3O60422 494 aaPredicted RBP13.22□□□□□ -0.29
NEDD4L-230ENST00000590638 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
NEDD4L-230ENST00000590638 PSEN2P49810 448 aa13.21□□□□□ -0.29
NEDD4L-230ENST00000590638 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
NEDD4L-230ENST00000590638 ST18O60284 1047 aa13.2□□□□□ -0.3
NEDD4L-230ENST00000590638 KIAA1468Q9P260 1216 aa13.2□□□□□ -0.3
NEDD4L-230ENST00000590638 SMAPO00193 183 aa13.19□□□□□ -0.3
NEDD4L-230ENST00000590638 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
NEDD4L-230ENST00000590638 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
NEDD4L-230ENST00000590638 SKIV2LQ15477 1246 aaKnown RBP13.18□□□□□ -0.3
NEDD4L-230ENST00000590638 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
NEDD4L-230ENST00000590638 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
NEDD4L-230ENST00000590638 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
NEDD4L-230ENST00000590638 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
NEDD4L-230ENST00000590638 PBX2P40425 430 aa13.16□□□□□ -0.3
NEDD4L-230ENST00000590638 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
NEDD4L-230ENST00000590638 POLR3EQ9NVU0 708 aa13.16□□□□□ -0.3
NEDD4L-230ENST00000590638 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
NEDD4L-230ENST00000590638 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
NEDD4L-230ENST00000590638 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
NEDD4L-230ENST00000590638 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.3
NEDD4L-230ENST00000590638 NUTM1Q86Y26 1132 aa13.15□□□□□ -0.3
NEDD4L-230ENST00000590638 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
NEDD4L-230ENST00000590638 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
NEDD4L-230ENST00000590638 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
NEDD4L-230ENST00000590638 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
NEDD4L-230ENST00000590638 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
NEDD4L-230ENST00000590638 RABGEF1Q9UJ41 708 aa13.14□□□□□ -0.31
NEDD4L-230ENST00000590638 CD46P15529 392 aa13.12□□□□□ -0.31
NEDD4L-230ENST00000590638 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
NEDD4L-230ENST00000590638 FLIIQ13045 1269 aa13.11□□□□□ -0.31
NEDD4L-230ENST00000590638 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
NEDD4L-230ENST00000590638 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
NEDD4L-230ENST00000590638 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-230ENST00000590638 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
NEDD4L-230ENST00000590638 CLK2P49760 499 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-230ENST00000590638 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
NEDD4L-230ENST00000590638 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-230ENST00000590638 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
NEDD4L-230ENST00000590638 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
NEDD4L-230ENST00000590638 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
NEDD4L-230ENST00000590638 HMGXB3Q12766 1538 aa13.08□□□□□ -0.32
NEDD4L-230ENST00000590638 SPIRE2Q8WWL2 714 aa13.07□□□□□ -0.32
NEDD4L-230ENST00000590638 FAM98CQ17RN3 349 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-230ENST00000590638 SWT1Q5T5J6 900 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-230ENST00000590638 POTEEQ6S8J3 1075 aa13.06□□□□□ -0.32
NEDD4L-230ENST00000590638 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
NEDD4L-230ENST00000590638 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
NEDD4L-230ENST00000590638 HS3ST6Q96QI5 342 aa13.04□□□□□ -0.32
NEDD4L-230ENST00000590638 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
NEDD4L-230ENST00000590638 CCDC88BA6NC98 1476 aa13.03□□□□□ -0.32
NEDD4L-230ENST00000590638 RNF40O75150 1001 aa13.02□□□□□ -0.33
NEDD4L-230ENST00000590638 KDM4AO75164 1064 aa13.01□□□□□ -0.33
NEDD4L-230ENST00000590638 LAPTM4BQ86VI4 370 aa13.01□□□□□ -0.33
NEDD4L-230ENST00000590638 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
NEDD4L-230ENST00000590638 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
NEDD4L-230ENST00000590638 STAC3Q96MF2 364 aa13□□□□□ -0.33
NEDD4L-230ENST00000590638 USP46P62068 366 aa12.99□□□□□ -0.33
NEDD4L-230ENST00000590638 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
NEDD4L-230ENST00000590638 LIMD1Q9UGP4 676 aa12.99□□□□□ -0.33
NEDD4L-230ENST00000590638 MOXD2PA6NHM9 499 aa12.98□□□□□ -0.33
NEDD4L-230ENST00000590638 TK2O00142 265 aa12.98□□□□□ -0.33
NEDD4L-230ENST00000590638 GCGRP47871 477 aa12.98□□□□□ -0.33
NEDD4L-230ENST00000590638 RSBN1LQ6PCB5 846 aaPredicted RBP12.98□□□□□ -0.33
NEDD4L-230ENST00000590638 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
NEDD4L-230ENST00000590638 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
NEDD4L-230ENST00000590638 SPTLC1O15269 473 aa12.97□□□□□ -0.33
NEDD4L-230ENST00000590638 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.33
NEDD4L-230ENST00000590638 NDUFV2P19404 249 aa12.96□□□□□ -0.33
NEDD4L-230ENST00000590638 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 NUTM2BA6NNL0 878 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 NUTM2EB1AL46 878 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 SLC10A3P09131 477 aa12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 GJA5P36382 358 aa12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 RFC5P40937 340 aa12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 NUTM2AQ8IVF1 878 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 ZFRQ96KR1 1074 aaKnown RBP12.94□□□□□ -0.34
NEDD4L-230ENST00000590638 TUSC1Q2TAM9 212 aa12.93□□□□□ -0.34
NEDD4L-230ENST00000590638 ADGRD1Q6QNK2 874 aa12.93□□□□□ -0.34
NEDD4L-230ENST00000590638 MCM6Q14566 821 aa12.92□□□□□ -0.34
NEDD4L-230ENST00000590638 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
NEDD4L-230ENST00000590638 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
NEDD4L-230ENST00000590638 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 BHMG1C9JSJ3 638 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 HOXA2O43364 376 aa12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 CFHP08603 1231 aa12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 LCE2DQ5TA82 110 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 LRCH3Q96II8 777 aa12.91□□□□□ -0.34
NEDD4L-230ENST00000590638 FDX1P10109 184 aa12.9□□□□□ -0.34
NEDD4L-230ENST00000590638 KMT5BQ4FZB7 885 aa12.9□□□□□ -0.34
NEDD4L-230ENST00000590638 RAD21O60216 631 aa12.89□□□□□ -0.35
NEDD4L-230ENST00000590638 PPP2R2DQ66LE6 453 aa12.89□□□□□ -0.35
NEDD4L-230ENST00000590638 BANK1Q8NDB2 785 aa12.88□□□□□ -0.35
NEDD4L-230ENST00000590638 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
NEDD4L-230ENST00000590638 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms