RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 NUP155O75694 1391 aa29.26■■■□□ 2.27
PDCD5-207ENST00000590247 SLC26A8Q96RN1 970 aa29.25■■■□□ 2.27
PDCD5-207ENST00000590247 RIMS2Q9UQ26 1411 aa29.22■■■□□ 2.27
PDCD5-207ENST00000590247 KCNA6P17658 529 aa29.22■■■□□ 2.27
PDCD5-207ENST00000590247 PLEKHG1Q9ULL1 1385 aa29.2■■■□□ 2.26
PDCD5-207ENST00000590247 NWD1Q149M9 1564 aa29.2■■■□□ 2.26
PDCD5-207ENST00000590247 TMEM94Q12767 1356 aa29.16■■■□□ 2.26
PDCD5-207ENST00000590247 CHD2O14647 1828 aaKnown RBP29.16■■■□□ 2.26
PDCD5-207ENST00000590247 NAIPQ13075 1403 aa29.16■■■□□ 2.26
PDCD5-207ENST00000590247 HDGFP51858 240 aaKnown RBP29.15■■■□□ 2.26
PDCD5-207ENST00000590247 NKTRP30414 1462 aaKnown RBP29.14■■■□□ 2.26
PDCD5-207ENST00000590247 SPHKAPQ2M3C7 1700 aa29.14■■■□□ 2.25
PDCD5-207ENST00000590247 CHGAP10645 457 aaKnown RBP29.13■■■□□ 2.25
PDCD5-207ENST00000590247 BCANQ96GW7 911 aa29.13■■■□□ 2.25
PDCD5-207ENST00000590247 MED1Q15648 1581 aaPredicted RBP29.13■■■□□ 2.25
PDCD5-207ENST00000590247 HFM1A2PYH4 1435 aa29.11■■■□□ 2.25
PDCD5-207ENST00000590247 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
PDCD5-207ENST00000590247 PROSER2Q86WR7 435 aaPredicted RBP29.11■■■□□ 2.25
PDCD5-207ENST00000590247 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.11■■■□□ 2.25
PDCD5-207ENST00000590247 SENP3Q9H4L4 574 aaPredicted RBP29.11■■■□□ 2.25
PDCD5-207ENST00000590247 ADAMTS13Q76LX8 1427 aa29.07■■■□□ 2.24
PDCD5-207ENST00000590247 RBM33Q96EV2 1170 aaKnown RBP29.07■■■□□ 2.24
PDCD5-207ENST00000590247 TBX22Q9Y458 520 aa29.07■■■□□ 2.24
PDCD5-207ENST00000590247 NUTM2DQ5VT03 806 aaPredicted RBP29.06■■■□□ 2.24
PDCD5-207ENST00000590247 FAM135BQ49AJ0 1406 aa29.05■■■□□ 2.24
PDCD5-207ENST00000590247 SOCS7O14512 581 aa29.05■■■□□ 2.24
PDCD5-207ENST00000590247 DIP2AQ14689 1571 aa29.04■■■□□ 2.24
PDCD5-207ENST00000590247 ROBO1Q9Y6N7 1651 aa28.99■■■□□ 2.23
PDCD5-207ENST00000590247 TRPM2O94759 1503 aa28.98■■■□□ 2.23
PDCD5-207ENST00000590247 PIK3R4Q99570 1358 aa28.98■■■□□ 2.23
PDCD5-207ENST00000590247 CLTCL1P53675 1640 aa28.98■■■□□ 2.23
PDCD5-207ENST00000590247 MSH6P52701 1360 aa28.97■■■□□ 2.23
PDCD5-207ENST00000590247 NRXN3Q9Y4C0 1643 aa28.97■■■□□ 2.23
PDCD5-207ENST00000590247 NCOA3Q9Y6Q9 1424 aa28.94■■■□□ 2.22
PDCD5-207ENST00000590247 KIF1BO60333 1816 aa28.94■■■□□ 2.22
PDCD5-207ENST00000590247 SETBP1Q9Y6X0 1596 aa28.92■■■□□ 2.22
PDCD5-207ENST00000590247 PTPRUQ92729 1446 aa28.92■■■□□ 2.22
PDCD5-207ENST00000590247 NEXMIFQ5QGS0 1516 aa28.89■■■□□ 2.22
PDCD5-207ENST00000590247 ZNF326Q5BKZ1 582 aaKnown RBP28.89■■■□□ 2.22
PDCD5-207ENST00000590247 TRIM52Q96A61 297 aa28.88■■■□□ 2.21
PDCD5-207ENST00000590247 SLAIN2Q9P270 581 aa28.88■■■□□ 2.21
PDCD5-207ENST00000590247 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.87■■■□□ 2.21
PDCD5-207ENST00000590247 AMOTL2Q9Y2J4 779 aa28.86■■■□□ 2.21
PDCD5-207ENST00000590247 XRN1Q8IZH2 1706 aaKnown RBP28.86■■■□□ 2.21
PDCD5-207ENST00000590247 PHF23Q9BUL5 403 aaPredicted RBP28.84■■■□□ 2.21
PDCD5-207ENST00000590247 ACIN1Q9UKV3 1341 aaKnown RBP28.83■■■□□ 2.21
PDCD5-207ENST00000590247 SLC4A1APQ9BWU0 796 aaKnown RBP28.82■■■□□ 2.2
PDCD5-207ENST00000590247 PHLPP1O60346 1717 aa28.81■■■□□ 2.2
PDCD5-207ENST00000590247 C19orf44Q9H6X5 657 aa28.81■■■□□ 2.2
PDCD5-207ENST00000590247 METP08581 1390 aa28.79■■■□□ 2.2
PDCD5-207ENST00000590247 C14orf37Q86TY3 774 aa28.79■■■□□ 2.2
PDCD5-207ENST00000590247 CADPS2Q86UW7 1296 aa28.76■■■□□ 2.19
PDCD5-207ENST00000590247 COL16A1Q07092 1604 aaPredicted RBP28.74■■■□□ 2.19
PDCD5-207ENST00000590247 RGS17Q9UGC6 210 aaPredicted RBP28.74■■■□□ 2.19
PDCD5-207ENST00000590247 SETD1AO15047 1707 aaKnown RBP28.74■■■□□ 2.19
PDCD5-207ENST00000590247 ATF3P18847 181 aa28.73■■■□□ 2.19
PDCD5-207ENST00000590247 PPLO60437 1756 aa28.72■■■□□ 2.19
PDCD5-207ENST00000590247 DCCP43146 1447 aa28.71■■■□□ 2.19
PDCD5-207ENST00000590247 SETD5Q9C0A6 1442 aa28.7■■■□□ 2.19
PDCD5-207ENST00000590247 RPGRIP1LQ68CZ1 1315 aa28.69■■■□□ 2.18
PDCD5-207ENST00000590247 AHDC1Q5TGY3 1603 aaPredicted RBP28.69■■■□□ 2.18
PDCD5-207ENST00000590247 FOXD1Q16676 465 aa28.69■■■□□ 2.18
PDCD5-207ENST00000590247 VGFO15240 615 aaPredicted RBP28.68■■■□□ 2.18
PDCD5-207ENST00000590247 JCADQ9P266 1359 aa28.67■■■□□ 2.18
PDCD5-207ENST00000590247 MPHOSPH9Q99550 1183 aa28.66■■■□□ 2.18
PDCD5-207ENST00000590247 NALCNQ8IZF0 1738 aa28.64■■■□□ 2.18
PDCD5-207ENST00000590247 CCDC144AA2RUR9 1427 aa28.64■■■□□ 2.18
PDCD5-207ENST00000590247 MST1RQ04912 1400 aa28.63■■■□□ 2.17
PDCD5-207ENST00000590247 ADGRL3Q9HAR2 1447 aa28.63■■■□□ 2.17
PDCD5-207ENST00000590247 BRINP3Q76B58 766 aa28.63■■■□□ 2.17
PDCD5-207ENST00000590247 IFT172Q9UG01 1749 aa28.6■■■□□ 2.17
PDCD5-207ENST00000590247 PTCH1Q13635 1447 aa28.6■■■□□ 2.17
PDCD5-207ENST00000590247 PRAG1Q86YV5 1406 aa28.6■■■□□ 2.17
PDCD5-207ENST00000590247 SHPRHQ149N8 1683 aa28.59■■■□□ 2.17
PDCD5-207ENST00000590247 ASXL1Q8IXJ9 1541 aa28.59■■■□□ 2.17
PDCD5-207ENST00000590247 SPATA31E1Q6ZUB1 1445 aa28.58■■■□□ 2.17
PDCD5-207ENST00000590247 NHSL1Q5SYE7 1610 aa28.56■■■□□ 2.16
PDCD5-207ENST00000590247 POTEAQ6S8J7 498 aa28.56■■■□□ 2.16
PDCD5-207ENST00000590247 RAB3GAP2Q9H2M9 1393 aa28.56■■■□□ 2.16
PDCD5-207ENST00000590247 ROBO2Q9HCK4 1378 aa28.56■■■□□ 2.16
PDCD5-207ENST00000590247 LRP6O75581 1613 aa28.54■■■□□ 2.16
PDCD5-207ENST00000590247 SPATA31A6Q5VVP1 1343 aa28.53■■■□□ 2.16
PDCD5-207ENST00000590247 ADGRF5Q8IZF2 1346 aa28.52■■■□□ 2.16
PDCD5-207ENST00000590247 RGL3Q3MIN7 710 aa28.5■■■□□ 2.15
PDCD5-207ENST00000590247 ANKRD30BQ9BXX2 1392 aa28.5■■■□□ 2.15
PDCD5-207ENST00000590247 HRCP23327 699 aa28.48■■■□□ 2.15
PDCD5-207ENST00000590247 C1orf167Q5SNV9 1468 aa28.47■■■□□ 2.15
PDCD5-207ENST00000590247 LAMC1P11047 1609 aa28.44■■■□□ 2.14
PDCD5-207ENST00000590247 DDX17Q92841 729 aaKnown RBP28.43■■■□□ 2.14
PDCD5-207ENST00000590247 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
PDCD5-207ENST00000590247 TECPR2O15040 1411 aa28.41■■■□□ 2.14
PDCD5-207ENST00000590247 LRRC59Q96AG4 307 aaKnown RBP28.4■■■□□ 2.14
PDCD5-207ENST00000590247 KNDC1Q76NI1 1749 aa28.4■■■□□ 2.14
PDCD5-207ENST00000590247 MEX3CQ5U5Q3 659 aaKnown RBP28.38■■■□□ 2.13
PDCD5-207ENST00000590247 LRPPRCP42704 1394 aaKnown RBP28.37■■■□□ 2.13
PDCD5-207ENST00000590247 CDC42BPGQ6DT37 1551 aa28.37■■■□□ 2.13
PDCD5-207ENST00000590247 ORAI2Q96SN7 254 aa28.37■■■□□ 2.13
PDCD5-207ENST00000590247 MYOM2P54296 1465 aa28.36■■■□□ 2.13
PDCD5-207ENST00000590247 ABCC11Q96J66 1382 aa28.36■■■□□ 2.13
PDCD5-207ENST00000590247 NRXN1Q9ULB1 1477 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms