RNA–Protein interactions for RNA: ENST00000590162.1

TMC6-214, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-214ENST00000590162 NAIPQ13075 1403 aa22.6■■□□□ 1.21
TMC6-214ENST00000590162 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
TMC6-214ENST00000590162 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
TMC6-214ENST00000590162 PLEKHG1Q9ULL1 1385 aa22.59■■□□□ 1.21
TMC6-214ENST00000590162 HFM1A2PYH4 1435 aa22.58■■□□□ 1.21
TMC6-214ENST00000590162 DISP3Q9P2K9 1392 aa22.58■■□□□ 1.21
TMC6-214ENST00000590162 KCNA6P17658 529 aa22.57■■□□□ 1.2
TMC6-214ENST00000590162 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
TMC6-214ENST00000590162 SPHKAPQ2M3C7 1700 aa22.55■■□□□ 1.2
TMC6-214ENST00000590162 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
TMC6-214ENST00000590162 NKTRP30414 1462 aaKnown RBP22.54■■□□□ 1.2
TMC6-214ENST00000590162 PROSER2Q86WR7 435 aaPredicted RBP22.52■■□□□ 1.2
TMC6-214ENST00000590162 HSPA1LP34931 641 aa22.51■■□□□ 1.19
TMC6-214ENST00000590162 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
TMC6-214ENST00000590162 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
TMC6-214ENST00000590162 NWD1Q149M9 1564 aa22.5■■□□□ 1.19
TMC6-214ENST00000590162 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
TMC6-214ENST00000590162 ILDR2Q71H61 639 aa22.49■■□□□ 1.19
TMC6-214ENST00000590162 DIP2AQ14689 1571 aa22.49■■□□□ 1.19
TMC6-214ENST00000590162 TBX22Q9Y458 520 aa22.48■■□□□ 1.19
TMC6-214ENST00000590162 TRPM2O94759 1503 aa22.47■■□□□ 1.19
TMC6-214ENST00000590162 NUTM2DQ5VT03 806 aaPredicted RBP22.47■■□□□ 1.19
TMC6-214ENST00000590162 ALKQ9UM73 1620 aa22.46■■□□□ 1.19
TMC6-214ENST00000590162 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
TMC6-214ENST00000590162 MSH6P52701 1360 aa22.45■■□□□ 1.18
TMC6-214ENST00000590162 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
TMC6-214ENST00000590162 XIRP1Q702N8 1843 aaKnown RBP22.43■■□□□ 1.18
TMC6-214ENST00000590162 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
TMC6-214ENST00000590162 ACIN1Q9UKV3 1341 aaKnown RBP22.41■■□□□ 1.18
TMC6-214ENST00000590162 SOCS7O14512 581 aa22.41■■□□□ 1.18
TMC6-214ENST00000590162 CHD2O14647 1828 aaKnown RBP22.41■■□□□ 1.18
TMC6-214ENST00000590162 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
TMC6-214ENST00000590162 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
TMC6-214ENST00000590162 RBM33Q96EV2 1170 aaKnown RBP22.39■■□□□ 1.17
TMC6-214ENST00000590162 KIF1BO60333 1816 aa22.38■■□□□ 1.17
TMC6-214ENST00000590162 NCOA3Q9Y6Q9 1424 aa22.38■■□□□ 1.17
TMC6-214ENST00000590162 FAM135BQ49AJ0 1406 aa22.37■■□□□ 1.17
TMC6-214ENST00000590162 SETBP1Q9Y6X0 1596 aa22.36■■□□□ 1.17
TMC6-214ENST00000590162 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.17
TMC6-214ENST00000590162 NEXMIFQ5QGS0 1516 aa22.33■■□□□ 1.17
TMC6-214ENST00000590162 AMOTL2Q9Y2J4 779 aa22.33■■□□□ 1.17
TMC6-214ENST00000590162 VGFO15240 615 aaPredicted RBP22.32■■□□□ 1.16
TMC6-214ENST00000590162 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
TMC6-214ENST00000590162 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
TMC6-214ENST00000590162 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
TMC6-214ENST00000590162 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
TMC6-214ENST00000590162 ROBO1Q9Y6N7 1651 aa22.3■■□□□ 1.16
TMC6-214ENST00000590162 NRXN3Q9Y4C0 1643 aa22.29■■□□□ 1.16
TMC6-214ENST00000590162 ATF3P18847 181 aa22.29■■□□□ 1.16
TMC6-214ENST00000590162 CADPS2Q86UW7 1296 aa22.29■■□□□ 1.16
TMC6-214ENST00000590162 MPHOSPH9Q99550 1183 aa22.28■■□□□ 1.16
TMC6-214ENST00000590162 C19orf44Q9H6X5 657 aa22.28■■□□□ 1.16
TMC6-214ENST00000590162 SETD5Q9C0A6 1442 aa22.27■■□□□ 1.16
TMC6-214ENST00000590162 PTPRUQ92729 1446 aa22.25■■□□□ 1.15
TMC6-214ENST00000590162 FOXD1Q16676 465 aa22.25■■□□□ 1.15
TMC6-214ENST00000590162 XRN1Q8IZH2 1706 aaKnown RBP22.24■■□□□ 1.15
TMC6-214ENST00000590162 METP08581 1390 aa22.24■■□□□ 1.15
TMC6-214ENST00000590162 DCCP43146 1447 aa22.22■■□□□ 1.15
TMC6-214ENST00000590162 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.21■■□□□ 1.15
TMC6-214ENST00000590162 PPLO60437 1756 aa22.18■■□□□ 1.14
TMC6-214ENST00000590162 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
TMC6-214ENST00000590162 ANKRD30BQ9BXX2 1392 aa22.17■■□□□ 1.14
TMC6-214ENST00000590162 RAB3GAP2Q9H2M9 1393 aa22.17■■□□□ 1.14
TMC6-214ENST00000590162 RGL3Q3MIN7 710 aa22.16■■□□□ 1.14
TMC6-214ENST00000590162 PTCH1Q13635 1447 aa22.14■■□□□ 1.14
TMC6-214ENST00000590162 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.14
TMC6-214ENST00000590162 JCADQ9P266 1359 aa22.13■■□□□ 1.13
TMC6-214ENST00000590162 SPATA31E1Q6ZUB1 1445 aa22.13■■□□□ 1.13
TMC6-214ENST00000590162 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
TMC6-214ENST00000590162 AHDC1Q5TGY3 1603 aaPredicted RBP22.09■■□□□ 1.13
TMC6-214ENST00000590162 PRAG1Q86YV5 1406 aa22.09■■□□□ 1.13
TMC6-214ENST00000590162 MST1RQ04912 1400 aa22.08■■□□□ 1.13
TMC6-214ENST00000590162 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
TMC6-214ENST00000590162 COL16A1Q07092 1604 aaPredicted RBP22.08■■□□□ 1.13
TMC6-214ENST00000590162 NALCNQ8IZF0 1738 aa22.08■■□□□ 1.12
TMC6-214ENST00000590162 ADGRF5Q8IZF2 1346 aa22.07■■□□□ 1.12
TMC6-214ENST00000590162 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
TMC6-214ENST00000590162 ASXL1Q8IXJ9 1541 aa22.06■■□□□ 1.12
TMC6-214ENST00000590162 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
TMC6-214ENST00000590162 SPATA31A6Q5VVP1 1343 aa22.05■■□□□ 1.12
TMC6-214ENST00000590162 HRCP23327 699 aa22.03■■□□□ 1.12
TMC6-214ENST00000590162 PIK3C2GO75747 1445 aa22.03■■□□□ 1.12
TMC6-214ENST00000590162 MEX3CQ5U5Q3 659 aaKnown RBP22.01■■□□□ 1.11
TMC6-214ENST00000590162 STK26Q9P289 416 aa22■■□□□ 1.11
TMC6-214ENST00000590162 MYOM2P54296 1465 aa22■■□□□ 1.11
TMC6-214ENST00000590162 LRPPRCP42704 1394 aaKnown RBP21.99■■□□□ 1.11
TMC6-214ENST00000590162 C1orf167Q5SNV9 1468 aa21.99■■□□□ 1.11
TMC6-214ENST00000590162 LAMC1P11047 1609 aa21.98■■□□□ 1.11
TMC6-214ENST00000590162 TECPR2O15040 1411 aa21.98■■□□□ 1.11
TMC6-214ENST00000590162 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
TMC6-214ENST00000590162 LRRC59Q96AG4 307 aaKnown RBP21.98■■□□□ 1.11
TMC6-214ENST00000590162 NHSL1Q5SYE7 1610 aa21.97■■□□□ 1.11
TMC6-214ENST00000590162 ABCC11Q96J66 1382 aa21.97■■□□□ 1.11
TMC6-214ENST00000590162 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
TMC6-214ENST00000590162 KNDC1Q76NI1 1749 aa21.95■■□□□ 1.1
TMC6-214ENST00000590162 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
TMC6-214ENST00000590162 DHX57Q6P158 1386 aaKnown RBP21.95■■□□□ 1.1
TMC6-214ENST00000590162 YTHDC2Q9H6S0 1430 aaKnown RBP21.95■■□□□ 1.1
TMC6-214ENST00000590162 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
TMC6-214ENST00000590162 NRXN1Q9ULB1 1477 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms