RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 PHLPP1O60346 1717 aa28.69■■■□□ 2.18
LSM14A-207ENST00000589878 NWD1Q149M9 1564 aa28.68■■■□□ 2.18
LSM14A-207ENST00000589878 NKTRP30414 1462 aaKnown RBP28.68■■■□□ 2.18
LSM14A-207ENST00000589878 SLC52A1Q9NWF4 448 aa28.67■■■□□ 2.18
LSM14A-207ENST00000589878 SETD1AO15047 1707 aaKnown RBP28.65■■■□□ 2.18
LSM14A-207ENST00000589878 MYO5BQ9ULV0 1848 aa28.64■■■□□ 2.18
LSM14A-207ENST00000589878 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
LSM14A-207ENST00000589878 CHD2O14647 1828 aaKnown RBP28.62■■■□□ 2.17
LSM14A-207ENST00000589878 JCADQ9P266 1359 aa28.61■■■□□ 2.17
LSM14A-207ENST00000589878 GCC2Q8IWJ2 1684 aa28.58■■■□□ 2.17
LSM14A-207ENST00000589878 PLEKHG1Q9ULL1 1385 aa28.58■■■□□ 2.17
LSM14A-207ENST00000589878 RIMS2Q9UQ26 1411 aa28.58■■■□□ 2.17
LSM14A-207ENST00000589878 CHGAP10645 457 aaKnown RBP28.57■■■□□ 2.16
LSM14A-207ENST00000589878 C14orf37Q86TY3 774 aa28.57■■■□□ 2.16
LSM14A-207ENST00000589878 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
LSM14A-207ENST00000589878 HDGFP51858 240 aaKnown RBP28.56■■■□□ 2.16
LSM14A-207ENST00000589878 FAM50AQ14320 339 aaKnown RBP28.56■■■□□ 2.16
LSM14A-207ENST00000589878 NUTM2DQ5VT03 806 aaPredicted RBP28.55■■■□□ 2.16
LSM14A-207ENST00000589878 MEX3CQ5U5Q3 659 aaKnown RBP28.53■■■□□ 2.16
LSM14A-207ENST00000589878 COL16A1Q07092 1604 aaPredicted RBP28.53■■■□□ 2.16
LSM14A-207ENST00000589878 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
LSM14A-207ENST00000589878 RPRD2Q5VT52 1461 aaKnown RBP28.53■■■□□ 2.16
LSM14A-207ENST00000589878 TMEM131LA2VDJ0 1609 aa28.52■■■□□ 2.16
LSM14A-207ENST00000589878 ANKRD50Q9ULJ7 1429 aa28.52■■■□□ 2.16
LSM14A-207ENST00000589878 TBX22Q9Y458 520 aa28.51■■■□□ 2.15
LSM14A-207ENST00000589878 LRP6O75581 1613 aa28.48■■■□□ 2.15
LSM14A-207ENST00000589878 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.47■■■□□ 2.15
LSM14A-207ENST00000589878 TRIM52Q96A61 297 aa28.47■■■□□ 2.15
LSM14A-207ENST00000589878 ATF3P18847 181 aa28.46■■■□□ 2.15
LSM14A-207ENST00000589878 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.46■■■□□ 2.15
LSM14A-207ENST00000589878 SPATA31A6Q5VVP1 1343 aa28.45■■■□□ 2.15
LSM14A-207ENST00000589878 NCOA3Q9Y6Q9 1424 aa28.43■■■□□ 2.14
LSM14A-207ENST00000589878 CADPS2Q86UW7 1296 aa28.43■■■□□ 2.14
LSM14A-207ENST00000589878 C19orf44Q9H6X5 657 aa28.43■■■□□ 2.14
LSM14A-207ENST00000589878 ADAMTS13Q76LX8 1427 aa28.43■■■□□ 2.14
LSM14A-207ENST00000589878 ZNF772Q68DY9 489 aaPredicted RBP28.42■■■□□ 2.14
LSM14A-207ENST00000589878 E9PCH4 1651 aa28.39■■■□□ 2.14
LSM14A-207ENST00000589878 NUTM2BA6NNL0 878 aaPredicted RBP28.39■■■□□ 2.14
LSM14A-207ENST00000589878 NUTM2EB1AL46 878 aaPredicted RBP28.39■■■□□ 2.14
LSM14A-207ENST00000589878 NUTM2AQ8IVF1 878 aaPredicted RBP28.39■■■□□ 2.14
LSM14A-207ENST00000589878 UPF1Q92900 1129 aaKnown RBP eCLIP28.39■■■□□ 2.14
LSM14A-207ENST00000589878 AHDC1Q5TGY3 1603 aaPredicted RBP28.38■■■□□ 2.13
LSM14A-207ENST00000589878 SHPRHQ149N8 1683 aa28.38■■■□□ 2.13
LSM14A-207ENST00000589878 AMOTL2Q9Y2J4 779 aa28.37■■■□□ 2.13
LSM14A-207ENST00000589878 UNC13BO14795 1591 aa28.36■■■□□ 2.13
LSM14A-207ENST00000589878 DIP2AQ14689 1571 aa28.35■■■□□ 2.13
LSM14A-207ENST00000589878 BRINP3Q76B58 766 aa28.34■■■□□ 2.13
LSM14A-207ENST00000589878 PIK3R4Q99570 1358 aa28.34■■■□□ 2.13
LSM14A-207ENST00000589878 RXRBP28702 533 aa28.33■■■□□ 2.13
LSM14A-207ENST00000589878 PTPRUQ92729 1446 aa28.32■■■□□ 2.12
LSM14A-207ENST00000589878 TRPM2O94759 1503 aa28.32■■■□□ 2.12
LSM14A-207ENST00000589878 IQGAP3Q86VI3 1631 aa28.26■■■□□ 2.11
LSM14A-207ENST00000589878 AFF2P51816 1311 aa28.25■■■□□ 2.11
LSM14A-207ENST00000589878 NUP155O75694 1391 aa28.24■■■□□ 2.11
LSM14A-207ENST00000589878 ASXL1Q8IXJ9 1541 aa28.23■■■□□ 2.11
LSM14A-207ENST00000589878 ITGAEP38570 1179 aa28.21■■■□□ 2.11
LSM14A-207ENST00000589878 ZNF326Q5BKZ1 582 aaKnown RBP28.21■■■□□ 2.11
LSM14A-207ENST00000589878 DDX17Q92841 729 aaKnown RBP28.21■■■□□ 2.11
LSM14A-207ENST00000589878 DCCP43146 1447 aa28.18■■■□□ 2.1
LSM14A-207ENST00000589878 MST1RQ04912 1400 aa28.18■■■□□ 2.1
LSM14A-207ENST00000589878 NRXN3Q9Y4C0 1643 aa28.18■■■□□ 2.1
LSM14A-207ENST00000589878 XRN1Q8IZH2 1706 aaKnown RBP28.18■■■□□ 2.1
LSM14A-207ENST00000589878 C8orf37Q96NL8 207 aa28.18■■■□□ 2.1
LSM14A-207ENST00000589878 ROCK1Q13464 1354 aa28.18■■■□□ 2.1
LSM14A-207ENST00000589878 SETD5Q9C0A6 1442 aa28.18■■■□□ 2.1
LSM14A-207ENST00000589878 LRRC59Q96AG4 307 aaKnown RBP28.17■■■□□ 2.1
LSM14A-207ENST00000589878 NHSL1Q5SYE7 1610 aa28.17■■■□□ 2.1
LSM14A-207ENST00000589878 CDK12Q9NYV4 1490 aaPredicted RBP28.15■■■□□ 2.1
LSM14A-207ENST00000589878 METP08581 1390 aa28.15■■■□□ 2.1
LSM14A-207ENST00000589878 QTRT2Q9H974 415 aaKnown RBP28.14■■■□□ 2.1
LSM14A-207ENST00000589878 SETBP1Q9Y6X0 1596 aa28.14■■■□□ 2.1
LSM14A-207ENST00000589878 SPHKAPQ2M3C7 1700 aa28.12■■■□□ 2.09
LSM14A-207ENST00000589878 RBM6P78332 1123 aaKnown RBP28.09■■■□□ 2.09
LSM14A-207ENST00000589878 PNPLA6Q8IY17 1366 aa28.09■■■□□ 2.09
LSM14A-207ENST00000589878 ADAMTS2O95450 1211 aa28.08■■■□□ 2.09
LSM14A-207ENST00000589878 RGS12O14924 1447 aa28.08■■■□□ 2.09
LSM14A-207ENST00000589878 ADGRL3Q9HAR2 1447 aa28.07■■■□□ 2.08
LSM14A-207ENST00000589878 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
LSM14A-207ENST00000589878 NGLY1Q96IV0 654 aa28.06■■■□□ 2.08
LSM14A-207ENST00000589878 PPARGC1BQ86YN6 1023 aaKnown RBP28.03■■■□□ 2.08
LSM14A-207ENST00000589878 CLTCL1P53675 1640 aa28■■■□□ 2.07
LSM14A-207ENST00000589878 NEXMIFQ5QGS0 1516 aa27.99■■■□□ 2.07
LSM14A-207ENST00000589878 C1orf167Q5SNV9 1468 aa27.99■■■□□ 2.07
LSM14A-207ENST00000589878 ORAI2Q96SN7 254 aa27.98■■■□□ 2.07
LSM14A-207ENST00000589878 USP21Q9UK80 565 aa27.96■■■□□ 2.07
LSM14A-207ENST00000589878 KIF1BO60333 1816 aa27.95■■■□□ 2.06
LSM14A-207ENST00000589878 SOS2Q07890 1332 aaPredicted RBP27.91■■■□□ 2.06
LSM14A-207ENST00000589878 ATAD2Q6PL18 1390 aa27.9■■■□□ 2.06
LSM14A-207ENST00000589878 ROBO2Q9HCK4 1378 aa27.9■■■□□ 2.06
LSM14A-207ENST00000589878 TRPC5Q9UL62 973 aaPredicted RBP27.89■■■□□ 2.06
LSM14A-207ENST00000589878 LAMC1P11047 1609 aa27.89■■■□□ 2.05
LSM14A-207ENST00000589878 VGFO15240 615 aaPredicted RBP27.87■■■□□ 2.05
LSM14A-207ENST00000589878 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
LSM14A-207ENST00000589878 FNBP4Q8N3X1 1017 aaPredicted RBP27.84■■■□□ 2.05
LSM14A-207ENST00000589878 SRCAPQ6ZRS2 3230 aa27.83■■■□□ 2.05
LSM14A-207ENST00000589878 ESCO1Q5FWF5 840 aa27.81■■■□□ 2.04
LSM14A-207ENST00000589878 ATRNO75882 1429 aa27.8■■■□□ 2.04
LSM14A-207ENST00000589878 XPCQ01831 940 aaPredicted RBP27.79■■■□□ 2.04
LSM14A-207ENST00000589878 ZRANB1Q9UGI0 708 aa27.79■■■□□ 2.04
LSM14A-207ENST00000589878 COL22A1Q8NFW1 1626 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms