RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
POLR2E-206ENST00000589737 ZFYVE9O95405 1425 aa23.49■■□□□ 1.35
POLR2E-206ENST00000589737 E9PCH4 1651 aa23.48■■□□□ 1.35
POLR2E-206ENST00000589737 KCNA6P17658 529 aa23.48■■□□□ 1.35
POLR2E-206ENST00000589737 SLC52A1Q9NWF4 448 aa23.48■■□□□ 1.35
POLR2E-206ENST00000589737 FAM50AQ14320 339 aaKnown RBP23.46■■□□□ 1.35
POLR2E-206ENST00000589737 IQGAP3Q86VI3 1631 aa23.45■■□□□ 1.34
POLR2E-206ENST00000589737 SLC26A8Q96RN1 970 aa23.45■■□□□ 1.34
POLR2E-206ENST00000589737 PLEKHG1Q9ULL1 1385 aa23.42■■□□□ 1.34
POLR2E-206ENST00000589737 RIMS2Q9UQ26 1411 aa23.41■■□□□ 1.34
POLR2E-206ENST00000589737 PHLPP1O60346 1717 aa23.39■■□□□ 1.34
POLR2E-206ENST00000589737 PROSER2Q86WR7 435 aaPredicted RBP23.39■■□□□ 1.33
POLR2E-206ENST00000589737 DIP2AQ14689 1571 aa23.38■■□□□ 1.33
POLR2E-206ENST00000589737 RBM33Q96EV2 1170 aaKnown RBP23.37■■□□□ 1.33
POLR2E-206ENST00000589737 RGS17Q9UGC6 210 aaPredicted RBP23.37■■□□□ 1.33
POLR2E-206ENST00000589737 MSH6P52701 1360 aa23.37■■□□□ 1.33
POLR2E-206ENST00000589737 ROCK1Q13464 1354 aa23.37■■□□□ 1.33
POLR2E-206ENST00000589737 BCANQ96GW7 911 aa23.33■■□□□ 1.33
POLR2E-206ENST00000589737 ADAMTS13Q76LX8 1427 aa23.33■■□□□ 1.32
POLR2E-206ENST00000589737 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
POLR2E-206ENST00000589737 COL16A1Q07092 1604 aaPredicted RBP23.32■■□□□ 1.32
POLR2E-206ENST00000589737 SPHKAPQ2M3C7 1700 aa23.31■■□□□ 1.32
POLR2E-206ENST00000589737 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.31■■□□□ 1.32
POLR2E-206ENST00000589737 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
POLR2E-206ENST00000589737 NCOA3Q9Y6Q9 1424 aa23.29■■□□□ 1.32
POLR2E-206ENST00000589737 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.27■■□□□ 1.32
POLR2E-206ENST00000589737 TBX22Q9Y458 520 aa23.27■■□□□ 1.32
POLR2E-206ENST00000589737 TRPM2O94759 1503 aa23.27■■□□□ 1.32
POLR2E-206ENST00000589737 NRXN3Q9Y4C0 1643 aa23.26■■□□□ 1.31
POLR2E-206ENST00000589737 PIK3R4Q99570 1358 aa23.26■■□□□ 1.31
POLR2E-206ENST00000589737 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
POLR2E-206ENST00000589737 XRN1Q8IZH2 1706 aaKnown RBP23.25■■□□□ 1.31
POLR2E-206ENST00000589737 AHDC1Q5TGY3 1603 aaPredicted RBP23.24■■□□□ 1.31
POLR2E-206ENST00000589737 CHGAP10645 457 aaKnown RBP23.24■■□□□ 1.31
POLR2E-206ENST00000589737 NUP155O75694 1391 aa23.22■■□□□ 1.31
POLR2E-206ENST00000589737 JCADQ9P266 1359 aa23.22■■□□□ 1.31
POLR2E-206ENST00000589737 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
POLR2E-206ENST00000589737 SETD1AO15047 1707 aaKnown RBP23.22■■□□□ 1.31
POLR2E-206ENST00000589737 POTEAQ6S8J7 498 aa23.21■■□□□ 1.31
POLR2E-206ENST00000589737 SETBP1Q9Y6X0 1596 aa23.21■■□□□ 1.31
POLR2E-206ENST00000589737 NUTM2DQ5VT03 806 aaPredicted RBP23.2■■□□□ 1.3
POLR2E-206ENST00000589737 PTPRUQ92729 1446 aa23.19■■□□□ 1.3
POLR2E-206ENST00000589737 LRP6O75581 1613 aa23.16■■□□□ 1.3
POLR2E-206ENST00000589737 CLTCL1P53675 1640 aa23.16■■□□□ 1.3
POLR2E-206ENST00000589737 DCCP43146 1447 aa23.15■■□□□ 1.3
POLR2E-206ENST00000589737 C14orf37Q86TY3 774 aa23.14■■□□□ 1.29
POLR2E-206ENST00000589737 KIF1BO60333 1816 aa23.14■■□□□ 1.29
POLR2E-206ENST00000589737 CADPS2Q86UW7 1296 aa23.13■■□□□ 1.29
POLR2E-206ENST00000589737 NHSL1Q5SYE7 1610 aa23.12■■□□□ 1.29
POLR2E-206ENST00000589737 ITGAEP38570 1179 aa23.12■■□□□ 1.29
POLR2E-206ENST00000589737 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
POLR2E-206ENST00000589737 NEXMIFQ5QGS0 1516 aa23.12■■□□□ 1.29
POLR2E-206ENST00000589737 AMOTL2Q9Y2J4 779 aa23.1■■□□□ 1.29
POLR2E-206ENST00000589737 NALCNQ8IZF0 1738 aa23.1■■□□□ 1.29
POLR2E-206ENST00000589737 SPATA31A6Q5VVP1 1343 aa23.09■■□□□ 1.29
POLR2E-206ENST00000589737 ASXL1Q8IXJ9 1541 aa23.09■■□□□ 1.29
POLR2E-206ENST00000589737 ATF3P18847 181 aa23.09■■□□□ 1.29
POLR2E-206ENST00000589737 MST1RQ04912 1400 aa23.06■■□□□ 1.28
POLR2E-206ENST00000589737 RRBP1Q9P2E9 1410 aaKnown RBP23.06■■□□□ 1.28
POLR2E-206ENST00000589737 METP08581 1390 aa23.04■■□□□ 1.28
POLR2E-206ENST00000589737 BRINP3Q76B58 766 aa23.04■■□□□ 1.28
POLR2E-206ENST00000589737 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
POLR2E-206ENST00000589737 ADGRL3Q9HAR2 1447 aa23.02■■□□□ 1.28
POLR2E-206ENST00000589737 NAIPQ13075 1403 aa23.01■■□□□ 1.27
POLR2E-206ENST00000589737 ZNF326Q5BKZ1 582 aaKnown RBP23.01■■□□□ 1.27
POLR2E-206ENST00000589737 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
POLR2E-206ENST00000589737 PPLO60437 1756 aa22.99■■□□□ 1.27
POLR2E-206ENST00000589737 MEX3CQ5U5Q3 659 aaKnown RBP22.98■■□□□ 1.27
POLR2E-206ENST00000589737 LAMC1P11047 1609 aa22.97■■□□□ 1.27
POLR2E-206ENST00000589737 ZNF772Q68DY9 489 aaPredicted RBP22.96■■□□□ 1.27
POLR2E-206ENST00000589737 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
POLR2E-206ENST00000589737 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
POLR2E-206ENST00000589737 HFM1A2PYH4 1435 aa22.92■■□□□ 1.26
POLR2E-206ENST00000589737 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
POLR2E-206ENST00000589737 PNPLA6Q8IY17 1366 aa22.89■■□□□ 1.26
POLR2E-206ENST00000589737 C1orf167Q5SNV9 1468 aa22.89■■□□□ 1.25
POLR2E-206ENST00000589737 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
POLR2E-206ENST00000589737 NUTM2EB1AL46 878 aaPredicted RBP22.87■■□□□ 1.25
POLR2E-206ENST00000589737 NUTM2AQ8IVF1 878 aaPredicted RBP22.87■■□□□ 1.25
POLR2E-206ENST00000589737 TRIM52Q96A61 297 aa22.86■■□□□ 1.25
POLR2E-206ENST00000589737 ROBO2Q9HCK4 1378 aa22.86■■□□□ 1.25
POLR2E-206ENST00000589737 IFT172Q9UG01 1749 aa22.85■■□□□ 1.25
POLR2E-206ENST00000589737 AFF2P51816 1311 aa22.85■■□□□ 1.25
POLR2E-206ENST00000589737 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
POLR2E-206ENST00000589737 DDX17Q92841 729 aaKnown RBP22.84■■□□□ 1.25
POLR2E-206ENST00000589737 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
POLR2E-206ENST00000589737 RXRBP28702 533 aa22.83■■□□□ 1.25
POLR2E-206ENST00000589737 UPF1Q92900 1129 aaKnown RBP eCLIP22.83■■□□□ 1.252e-9■■■■■ 30.9
POLR2E-206ENST00000589737 CDC42BPGQ6DT37 1551 aa22.83■■□□□ 1.25
POLR2E-206ENST00000589737 COL22A1Q8NFW1 1626 aaPredicted RBP22.82■■□□□ 1.24
POLR2E-206ENST00000589737 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
POLR2E-206ENST00000589737 KNDC1Q76NI1 1749 aa22.79■■□□□ 1.24
POLR2E-206ENST00000589737 RGS12O14924 1447 aa22.79■■□□□ 1.24
POLR2E-206ENST00000589737 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
POLR2E-206ENST00000589737 MARF1Q9Y4F3 1742 aaKnown RBP22.78■■□□□ 1.24
POLR2E-206ENST00000589737 C8orf37Q96NL8 207 aa22.77■■□□□ 1.24
POLR2E-206ENST00000589737 SOS2Q07890 1332 aaPredicted RBP22.77■■□□□ 1.24
POLR2E-206ENST00000589737 ORAI2Q96SN7 254 aa22.74■■□□□ 1.23
POLR2E-206ENST00000589737 TECPR2O15040 1411 aa22.73■■□□□ 1.23
POLR2E-206ENST00000589737 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms