RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 ILDR2Q71H61 639 aa17.02■□□□□ 0.32
DDX39A-210ENST00000589675 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
DDX39A-210ENST00000589675 ITGAEP38570 1179 aa17.01■□□□□ 0.31
DDX39A-210ENST00000589675 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
DDX39A-210ENST00000589675 NWD1Q149M9 1564 aa17■□□□□ 0.31
DDX39A-210ENST00000589675 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
DDX39A-210ENST00000589675 RIMS2Q9UQ26 1411 aa17■□□□□ 0.31
DDX39A-210ENST00000589675 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX39A-210ENST00000589675 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
DDX39A-210ENST00000589675 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
DDX39A-210ENST00000589675 TMEM94Q12767 1356 aa16.97■□□□□ 0.31
DDX39A-210ENST00000589675 TBX22Q9Y458 520 aa16.96■□□□□ 0.31
DDX39A-210ENST00000589675 SOCS7O14512 581 aa16.95■□□□□ 0.3
DDX39A-210ENST00000589675 PPP1R15AO75807 674 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-210ENST00000589675 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-210ENST00000589675 BCANQ96GW7 911 aa16.95■□□□□ 0.3
DDX39A-210ENST00000589675 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
DDX39A-210ENST00000589675 FAM135BQ49AJ0 1406 aa16.95■□□□□ 0.3
DDX39A-210ENST00000589675 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-210ENST00000589675 CHGAP10645 457 aaKnown RBP16.93■□□□□ 0.3
DDX39A-210ENST00000589675 NAIPQ13075 1403 aa16.93■□□□□ 0.3
DDX39A-210ENST00000589675 DIP2AQ14689 1571 aa16.93■□□□□ 0.3
DDX39A-210ENST00000589675 PIK3R4Q99570 1358 aa16.91■□□□□ 0.3
DDX39A-210ENST00000589675 ADAMTS13Q76LX8 1427 aa16.91■□□□□ 0.3
DDX39A-210ENST00000589675 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
DDX39A-210ENST00000589675 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
DDX39A-210ENST00000589675 MSH6P52701 1360 aa16.88■□□□□ 0.29
DDX39A-210ENST00000589675 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
DDX39A-210ENST00000589675 RBM33Q96EV2 1170 aaKnown RBP16.86■□□□□ 0.29
DDX39A-210ENST00000589675 TRPM2O94759 1503 aa16.86■□□□□ 0.29
DDX39A-210ENST00000589675 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-210ENST00000589675 SETBP1Q9Y6X0 1596 aa16.85■□□□□ 0.29
DDX39A-210ENST00000589675 KIF1BO60333 1816 aa16.84■□□□□ 0.29
DDX39A-210ENST00000589675 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
DDX39A-210ENST00000589675 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
DDX39A-210ENST00000589675 CLTCL1P53675 1640 aa16.84■□□□□ 0.29
DDX39A-210ENST00000589675 NRXN3Q9Y4C0 1643 aa16.83■□□□□ 0.28
DDX39A-210ENST00000589675 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
DDX39A-210ENST00000589675 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
DDX39A-210ENST00000589675 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-210ENST00000589675 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-210ENST00000589675 C19orf44Q9H6X5 657 aa16.8■□□□□ 0.28
DDX39A-210ENST00000589675 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
DDX39A-210ENST00000589675 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
DDX39A-210ENST00000589675 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
DDX39A-210ENST00000589675 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
DDX39A-210ENST00000589675 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
DDX39A-210ENST00000589675 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
DDX39A-210ENST00000589675 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
DDX39A-210ENST00000589675 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
DDX39A-210ENST00000589675 DCCP43146 1447 aa16.76■□□□□ 0.27
DDX39A-210ENST00000589675 ATF3P18847 181 aa16.75■□□□□ 0.27
DDX39A-210ENST00000589675 METP08581 1390 aa16.75■□□□□ 0.27
DDX39A-210ENST00000589675 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
DDX39A-210ENST00000589675 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
DDX39A-210ENST00000589675 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
DDX39A-210ENST00000589675 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-210ENST00000589675 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-210ENST00000589675 JCADQ9P266 1359 aa16.72■□□□□ 0.27
DDX39A-210ENST00000589675 AHDC1Q5TGY3 1603 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-210ENST00000589675 PPLO60437 1756 aa16.71■□□□□ 0.27
DDX39A-210ENST00000589675 SETD1AO15047 1707 aaKnown RBP16.7■□□□□ 0.26
DDX39A-210ENST00000589675 PRAG1Q86YV5 1406 aa16.68■□□□□ 0.26
DDX39A-210ENST00000589675 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
DDX39A-210ENST00000589675 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
DDX39A-210ENST00000589675 MST1RQ04912 1400 aa16.66■□□□□ 0.26
DDX39A-210ENST00000589675 PTCH1Q13635 1447 aa16.66■□□□□ 0.26
DDX39A-210ENST00000589675 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
DDX39A-210ENST00000589675 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
DDX39A-210ENST00000589675 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
DDX39A-210ENST00000589675 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
DDX39A-210ENST00000589675 NALCNQ8IZF0 1738 aa16.65■□□□□ 0.26
DDX39A-210ENST00000589675 FOXD1Q16676 465 aa16.64■□□□□ 0.25
DDX39A-210ENST00000589675 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
DDX39A-210ENST00000589675 SPATA31E1Q6ZUB1 1445 aa16.63■□□□□ 0.25
DDX39A-210ENST00000589675 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
DDX39A-210ENST00000589675 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
DDX39A-210ENST00000589675 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
DDX39A-210ENST00000589675 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
DDX39A-210ENST00000589675 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
DDX39A-210ENST00000589675 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
DDX39A-210ENST00000589675 LRP6O75581 1613 aa16.58■□□□□ 0.24
DDX39A-210ENST00000589675 LAMC1P11047 1609 aa16.58■□□□□ 0.24
DDX39A-210ENST00000589675 C1orf167Q5SNV9 1468 aa16.57■□□□□ 0.24
DDX39A-210ENST00000589675 ADGRF5Q8IZF2 1346 aa16.57■□□□□ 0.24
DDX39A-210ENST00000589675 LRRC59Q96AG4 307 aaKnown RBP16.57■□□□□ 0.24
DDX39A-210ENST00000589675 RGL3Q3MIN7 710 aa16.56■□□□□ 0.24
DDX39A-210ENST00000589675 TECPR2O15040 1411 aa16.55■□□□□ 0.24
DDX39A-210ENST00000589675 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
DDX39A-210ENST00000589675 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
DDX39A-210ENST00000589675 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
DDX39A-210ENST00000589675 ZNF772Q68DY9 489 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-210ENST00000589675 KNDC1Q76NI1 1749 aa16.53■□□□□ 0.24
DDX39A-210ENST00000589675 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.24
DDX39A-210ENST00000589675 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
DDX39A-210ENST00000589675 CDC42BPGQ6DT37 1551 aa16.52■□□□□ 0.24
DDX39A-210ENST00000589675 SOS2Q07890 1332 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-210ENST00000589675 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
DDX39A-210ENST00000589675 HRCP23327 699 aa16.5■□□□□ 0.23
DDX39A-210ENST00000589675 SIRT1Q96EB6 747 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms