RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 GCC2Q8IWJ2 1684 aa28.16■■■□□ 2.1
CXXC1-211ENST00000589548 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
CXXC1-211ENST00000589548 ADGRL2O95490 1459 aa28.15■■■□□ 2.1
CXXC1-211ENST00000589548 SETD1AO15047 1707 aaKnown RBP28.15■■■□□ 2.1
CXXC1-211ENST00000589548 ZFYVE9O95405 1425 aa28.13■■■□□ 2.09
CXXC1-211ENST00000589548 RPRD2Q5VT52 1461 aaKnown RBP28.1■■■□□ 2.09
CXXC1-211ENST00000589548 TMEM131LA2VDJ0 1609 aa28.1■■■□□ 2.09
CXXC1-211ENST00000589548 MSH6P52701 1360 aa28.1■■■□□ 2.09
CXXC1-211ENST00000589548 SLC52A1Q9NWF4 448 aa28.09■■■□□ 2.09
CXXC1-211ENST00000589548 COL16A1Q07092 1604 aaPredicted RBP28.08■■■□□ 2.09
CXXC1-211ENST00000589548 APLP2Q06481 763 aa28.08■■■□□ 2.09
CXXC1-211ENST00000589548 PLEKHG1Q9ULL1 1385 aa28.07■■■□□ 2.08
CXXC1-211ENST00000589548 RIMS2Q9UQ26 1411 aa28.04■■■□□ 2.08
CXXC1-211ENST00000589548 BCANQ96GW7 911 aa28.04■■■□□ 2.08
CXXC1-211ENST00000589548 SLAIN2Q9P270 581 aa28.04■■■□□ 2.08
CXXC1-211ENST00000589548 ANKRD50Q9ULJ7 1429 aa28.03■■■□□ 2.08
CXXC1-211ENST00000589548 JCADQ9P266 1359 aa28.01■■■□□ 2.07
CXXC1-211ENST00000589548 UNC13BO14795 1591 aa28.01■■■□□ 2.07
CXXC1-211ENST00000589548 E9PCH4 1651 aa28■■■□□ 2.07
CXXC1-211ENST00000589548 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.98■■■□□ 2.07
CXXC1-211ENST00000589548 LRP6O75581 1613 aa27.98■■■□□ 2.07
CXXC1-211ENST00000589548 ADAMTS13Q76LX8 1427 aa27.96■■■□□ 2.07
CXXC1-211ENST00000589548 PPP1R15AO75807 674 aaPredicted RBP27.95■■■□□ 2.06
CXXC1-211ENST00000589548 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
CXXC1-211ENST00000589548 DIP2AQ14689 1571 aa27.94■■■□□ 2.06
CXXC1-211ENST00000589548 NCOA3Q9Y6Q9 1424 aa27.93■■■□□ 2.06
CXXC1-211ENST00000589548 AHDC1Q5TGY3 1603 aaPredicted RBP27.93■■■□□ 2.06
CXXC1-211ENST00000589548 TBX22Q9Y458 520 aa27.93■■■□□ 2.06
CXXC1-211ENST00000589548 SHPRHQ149N8 1683 aa27.93■■■□□ 2.06
CXXC1-211ENST00000589548 IQGAP3Q86VI3 1631 aa27.89■■■□□ 2.06
CXXC1-211ENST00000589548 NUTM2DQ5VT03 806 aaPredicted RBP27.89■■■□□ 2.06
CXXC1-211ENST00000589548 HDGFP51858 240 aaKnown RBP27.88■■■□□ 2.05
CXXC1-211ENST00000589548 CHGAP10645 457 aaKnown RBP27.86■■■□□ 2.05
CXXC1-211ENST00000589548 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.85■■■□□ 2.05
CXXC1-211ENST00000589548 SPATA31A6Q5VVP1 1343 aa27.85■■■□□ 2.05
CXXC1-211ENST00000589548 TRPM2O94759 1503 aa27.84■■■□□ 2.05
CXXC1-211ENST00000589548 C14orf37Q86TY3 774 aa27.84■■■□□ 2.05
CXXC1-211ENST00000589548 PIK3R4Q99570 1358 aa27.84■■■□□ 2.05
CXXC1-211ENST00000589548 PTPRUQ92729 1446 aa27.84■■■□□ 2.05
CXXC1-211ENST00000589548 NRXN3Q9Y4C0 1643 aa27.82■■■□□ 2.04
CXXC1-211ENST00000589548 XRN1Q8IZH2 1706 aaKnown RBP27.81■■■□□ 2.04
CXXC1-211ENST00000589548 CADPS2Q86UW7 1296 aa27.81■■■□□ 2.04
CXXC1-211ENST00000589548 C19orf44Q9H6X5 657 aa27.81■■■□□ 2.04
CXXC1-211ENST00000589548 ATF3P18847 181 aa27.77■■■□□ 2.04
CXXC1-211ENST00000589548 MEX3CQ5U5Q3 659 aaKnown RBP27.77■■■□□ 2.04
CXXC1-211ENST00000589548 NHSL1Q5SYE7 1610 aa27.76■■■□□ 2.03
CXXC1-211ENST00000589548 ROCK1Q13464 1354 aa27.75■■■□□ 2.03
CXXC1-211ENST00000589548 ZNF772Q68DY9 489 aaPredicted RBP27.75■■■□□ 2.03
CXXC1-211ENST00000589548 BRINP3Q76B58 766 aa27.75■■■□□ 2.03
CXXC1-211ENST00000589548 AMOTL2Q9Y2J4 779 aa27.75■■■□□ 2.03
CXXC1-211ENST00000589548 ASXL1Q8IXJ9 1541 aa27.74■■■□□ 2.03
CXXC1-211ENST00000589548 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
CXXC1-211ENST00000589548 SETBP1Q9Y6X0 1596 aa27.73■■■□□ 2.03
CXXC1-211ENST00000589548 SPHKAPQ2M3C7 1700 aa27.73■■■□□ 2.03
CXXC1-211ENST00000589548 UPF1Q92900 1129 aaKnown RBP eCLIP27.73■■■□□ 2.03
CXXC1-211ENST00000589548 DCCP43146 1447 aa27.73■■■□□ 2.03
CXXC1-211ENST00000589548 MST1RQ04912 1400 aa27.69■■■□□ 2.02
CXXC1-211ENST00000589548 NUP155O75694 1391 aa27.69■■■□□ 2.02
CXXC1-211ENST00000589548 NALCNQ8IZF0 1738 aa27.67■■■□□ 2.02
CXXC1-211ENST00000589548 SETD5Q9C0A6 1442 aa27.67■■■□□ 2.02
CXXC1-211ENST00000589548 NUTM2BA6NNL0 878 aaPredicted RBP27.66■■■□□ 2.02
CXXC1-211ENST00000589548 NUTM2EB1AL46 878 aaPredicted RBP27.66■■■□□ 2.02
CXXC1-211ENST00000589548 NUTM2AQ8IVF1 878 aaPredicted RBP27.66■■■□□ 2.02
CXXC1-211ENST00000589548 CDK12Q9NYV4 1490 aaPredicted RBP27.65■■■□□ 2.02
CXXC1-211ENST00000589548 METP08581 1390 aa27.63■■■□□ 2.01
CXXC1-211ENST00000589548 RXRBP28702 533 aa27.63■■■□□ 2.01
CXXC1-211ENST00000589548 AFF2P51816 1311 aa27.62■■■□□ 2.01
CXXC1-211ENST00000589548 CLTCL1P53675 1640 aa27.59■■■□□ 2.01
CXXC1-211ENST00000589548 ADGRL3Q9HAR2 1447 aa27.59■■■□□ 2.01
CXXC1-211ENST00000589548 NEXMIFQ5QGS0 1516 aa27.59■■■□□ 2.01
CXXC1-211ENST00000589548 DDX17Q92841 729 aaKnown RBP27.57■■■□□ 2
CXXC1-211ENST00000589548 PNPLA6Q8IY17 1366 aa27.56■■■□□ 2
CXXC1-211ENST00000589548 ITGAEP38570 1179 aa27.55■■■□□ 2
CXXC1-211ENST00000589548 RGS12O14924 1447 aa27.55■■■□□ 2
CXXC1-211ENST00000589548 KIF1BO60333 1816 aa27.53■■■□□ 2
CXXC1-211ENST00000589548 LAMC1P11047 1609 aa27.53■■■□□ 2
CXXC1-211ENST00000589548 ZNF326Q5BKZ1 582 aaKnown RBP27.53■■■□□ 2
CXXC1-211ENST00000589548 LRRC59Q96AG4 307 aaKnown RBP27.52■■■□□ 2
CXXC1-211ENST00000589548 C8orf37Q96NL8 207 aa27.49■■□□□ 1.99
CXXC1-211ENST00000589548 C1orf167Q5SNV9 1468 aa27.47■■□□□ 1.99
CXXC1-211ENST00000589548 QTRT2Q9H974 415 aaKnown RBP27.45■■□□□ 1.98
CXXC1-211ENST00000589548 SRCAPQ6ZRS2 3230 aa27.44■■□□□ 1.98
CXXC1-211ENST00000589548 RBM6P78332 1123 aaKnown RBP27.44■■□□□ 1.98
CXXC1-211ENST00000589548 PTCH1Q13635 1447 aa27.43■■□□□ 1.98
CXXC1-211ENST00000589548 ROBO2Q9HCK4 1378 aa27.4■■□□□ 1.98
CXXC1-211ENST00000589548 ADAMTS2O95450 1211 aa27.39■■□□□ 1.98
CXXC1-211ENST00000589548 COL22A1Q8NFW1 1626 aaPredicted RBP27.38■■□□□ 1.97
CXXC1-211ENST00000589548 PPARGC1BQ86YN6 1023 aaKnown RBP27.38■■□□□ 1.97
CXXC1-211ENST00000589548 SOS2Q07890 1332 aaPredicted RBP27.38■■□□□ 1.97
CXXC1-211ENST00000589548 PRAG1Q86YV5 1406 aa27.37■■□□□ 1.97
CXXC1-211ENST00000589548 ORAI2Q96SN7 254 aa27.37■■□□□ 1.97
CXXC1-211ENST00000589548 PPLO60437 1756 aa27.37■■□□□ 1.97
CXXC1-211ENST00000589548 NGLY1Q96IV0 654 aa27.36■■□□□ 1.97
CXXC1-211ENST00000589548 MARF1Q9Y4F3 1742 aaKnown RBP27.33■■□□□ 1.96
CXXC1-211ENST00000589548 NAIPQ13075 1403 aa27.33■■□□□ 1.96
CXXC1-211ENST00000589548 USP21Q9UK80 565 aa27.29■■□□□ 1.96
CXXC1-211ENST00000589548 ATRNO75882 1429 aa27.29■■□□□ 1.96
CXXC1-211ENST00000589548 ATAD2Q6PL18 1390 aa27.28■■□□□ 1.96
CXXC1-211ENST00000589548 CDC42BPGQ6DT37 1551 aa27.27■■□□□ 1.96
CXXC1-211ENST00000589548 MYOM2P54296 1465 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms