RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 RPRD2Q5VT52 1461 aaKnown RBP17.22■□□□□ 0.35
MRPL54-202ENST00000589174 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
MRPL54-202ENST00000589174 EID1Q9Y6B2 187 aa17.21■□□□□ 0.35
MRPL54-202ENST00000589174 KCNA6P17658 529 aa17.19■□□□□ 0.34
MRPL54-202ENST00000589174 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
MRPL54-202ENST00000589174 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
MRPL54-202ENST00000589174 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
MRPL54-202ENST00000589174 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
MRPL54-202ENST00000589174 SLC52A1Q9NWF4 448 aa17.16■□□□□ 0.34
MRPL54-202ENST00000589174 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
MRPL54-202ENST00000589174 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
MRPL54-202ENST00000589174 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
MRPL54-202ENST00000589174 ROCK1Q13464 1354 aa17.13■□□□□ 0.33
MRPL54-202ENST00000589174 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
MRPL54-202ENST00000589174 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
MRPL54-202ENST00000589174 NUTM2DQ5VT03 806 aaPredicted RBP17.1■□□□□ 0.33
MRPL54-202ENST00000589174 PPARGC1BQ86YN6 1023 aaKnown RBP17.1■□□□□ 0.33
MRPL54-202ENST00000589174 PTPRUQ92729 1446 aa17.09■□□□□ 0.33
MRPL54-202ENST00000589174 PHLPP1O60346 1717 aa17.08■□□□□ 0.32
MRPL54-202ENST00000589174 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
MRPL54-202ENST00000589174 COL16A1Q07092 1604 aaPredicted RBP17.08■□□□□ 0.32
MRPL54-202ENST00000589174 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.32
MRPL54-202ENST00000589174 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
MRPL54-202ENST00000589174 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
MRPL54-202ENST00000589174 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
MRPL54-202ENST00000589174 DIP2AQ14689 1571 aa17.04■□□□□ 0.32
MRPL54-202ENST00000589174 XRN1Q8IZH2 1706 aaKnown RBP17.04■□□□□ 0.32
MRPL54-202ENST00000589174 NUP155O75694 1391 aa17.03■□□□□ 0.32
MRPL54-202ENST00000589174 MSH6P52701 1360 aa17.03■□□□□ 0.32
MRPL54-202ENST00000589174 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
MRPL54-202ENST00000589174 ITGAEP38570 1179 aa17.02■□□□□ 0.32
MRPL54-202ENST00000589174 BCANQ96GW7 911 aa17.02■□□□□ 0.32
MRPL54-202ENST00000589174 SLAIN2Q9P270 581 aa17.02■□□□□ 0.32
MRPL54-202ENST00000589174 LRP6O75581 1613 aa17.02■□□□□ 0.31
MRPL54-202ENST00000589174 CLTCL1P53675 1640 aa17.02■□□□□ 0.31
MRPL54-202ENST00000589174 SETD1AO15047 1707 aaKnown RBP17.01■□□□□ 0.31
MRPL54-202ENST00000589174 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
MRPL54-202ENST00000589174 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
MRPL54-202ENST00000589174 TRPM2O94759 1503 aa16.99■□□□□ 0.31
MRPL54-202ENST00000589174 AHDC1Q5TGY3 1603 aaPredicted RBP16.99■□□□□ 0.31
MRPL54-202ENST00000589174 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
MRPL54-202ENST00000589174 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
MRPL54-202ENST00000589174 PIK3R4Q99570 1358 aa16.97■□□□□ 0.31
MRPL54-202ENST00000589174 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
MRPL54-202ENST00000589174 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
MRPL54-202ENST00000589174 SHPRHQ149N8 1683 aa16.95■□□□□ 0.3
MRPL54-202ENST00000589174 METP08581 1390 aa16.95■□□□□ 0.3
MRPL54-202ENST00000589174 NAIPQ13075 1403 aa16.95■□□□□ 0.3
MRPL54-202ENST00000589174 JCADQ9P266 1359 aa16.94■□□□□ 0.3
MRPL54-202ENST00000589174 NALCNQ8IZF0 1738 aa16.94■□□□□ 0.3
MRPL54-202ENST00000589174 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
MRPL54-202ENST00000589174 HDGFP51858 240 aaKnown RBP16.93■□□□□ 0.3
MRPL54-202ENST00000589174 NHSL1Q5SYE7 1610 aa16.92■□□□□ 0.3
MRPL54-202ENST00000589174 MST1RQ04912 1400 aa16.91■□□□□ 0.3
MRPL54-202ENST00000589174 C19orf44Q9H6X5 657 aa16.91■□□□□ 0.3
MRPL54-202ENST00000589174 KIF1BO60333 1816 aa16.91■□□□□ 0.3
MRPL54-202ENST00000589174 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
MRPL54-202ENST00000589174 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
MRPL54-202ENST00000589174 DCCP43146 1447 aa16.87■□□□□ 0.29
MRPL54-202ENST00000589174 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
MRPL54-202ENST00000589174 C14orf37Q86TY3 774 aa16.86■□□□□ 0.29
MRPL54-202ENST00000589174 PPLO60437 1756 aa16.85■□□□□ 0.29
MRPL54-202ENST00000589174 DDX17Q92841 729 aaKnown RBP16.85■□□□□ 0.29
MRPL54-202ENST00000589174 ATF3P18847 181 aa16.84■□□□□ 0.29
MRPL54-202ENST00000589174 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
MRPL54-202ENST00000589174 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
MRPL54-202ENST00000589174 SPATA31A6Q5VVP1 1343 aa16.83■□□□□ 0.28
MRPL54-202ENST00000589174 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.28
MRPL54-202ENST00000589174 LAMC1P11047 1609 aa16.82■□□□□ 0.28
MRPL54-202ENST00000589174 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
MRPL54-202ENST00000589174 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
MRPL54-202ENST00000589174 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
MRPL54-202ENST00000589174 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
MRPL54-202ENST00000589174 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
MRPL54-202ENST00000589174 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
MRPL54-202ENST00000589174 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.28
MRPL54-202ENST00000589174 FOXD1Q16676 465 aa16.77■□□□□ 0.28
MRPL54-202ENST00000589174 NUTM2BA6NNL0 878 aaPredicted RBP16.75■□□□□ 0.27
MRPL54-202ENST00000589174 NUTM2EB1AL46 878 aaPredicted RBP16.75■□□□□ 0.27
MRPL54-202ENST00000589174 NUTM2AQ8IVF1 878 aaPredicted RBP16.75■□□□□ 0.27
MRPL54-202ENST00000589174 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
MRPL54-202ENST00000589174 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
MRPL54-202ENST00000589174 AFF2P51816 1311 aa16.72■□□□□ 0.27
MRPL54-202ENST00000589174 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
MRPL54-202ENST00000589174 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
MRPL54-202ENST00000589174 SPATA31E1Q6ZUB1 1445 aa16.71■□□□□ 0.27
MRPL54-202ENST00000589174 ZNF772Q68DY9 489 aaPredicted RBP16.71■□□□□ 0.27
MRPL54-202ENST00000589174 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
MRPL54-202ENST00000589174 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
MRPL54-202ENST00000589174 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
MRPL54-202ENST00000589174 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
MRPL54-202ENST00000589174 COL22A1Q8NFW1 1626 aaPredicted RBP16.69■□□□□ 0.26
MRPL54-202ENST00000589174 RGS12O14924 1447 aa16.69■□□□□ 0.26
MRPL54-202ENST00000589174 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
MRPL54-202ENST00000589174 VGFO15240 615 aaPredicted RBP16.68■□□□□ 0.26
MRPL54-202ENST00000589174 LRRC59Q96AG4 307 aaKnown RBP16.68■□□□□ 0.26
MRPL54-202ENST00000589174 RPGRIP1LQ68CZ1 1315 aa16.68■□□□□ 0.26
MRPL54-202ENST00000589174 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
MRPL54-202ENST00000589174 PLEKHH1Q9ULM0 1364 aa16.66■□□□□ 0.26
MRPL54-202ENST00000589174 PXDNQ92626 1479 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms