RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-210ENST00000588458 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
ABCA8-210ENST00000588458 NUTM2DQ5VT03 806 aaPredicted RBP19.66■□□□□ 0.74
ABCA8-210ENST00000588458 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
ABCA8-210ENST00000588458 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
ABCA8-210ENST00000588458 NUP155O75694 1391 aa19.65■□□□□ 0.74
ABCA8-210ENST00000588458 ROCK1Q13464 1354 aa19.65■□□□□ 0.74
ABCA8-210ENST00000588458 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
ABCA8-210ENST00000588458 TET3O43151 1660 aa19.65■□□□□ 0.74
ABCA8-210ENST00000588458 FAM135BQ49AJ0 1406 aa19.63■□□□□ 0.73
ABCA8-210ENST00000588458 PLEKHG1Q9ULL1 1385 aa19.62■□□□□ 0.73
ABCA8-210ENST00000588458 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
ABCA8-210ENST00000588458 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
ABCA8-210ENST00000588458 MSH6P52701 1360 aa19.6■□□□□ 0.73
ABCA8-210ENST00000588458 C14orf37Q86TY3 774 aa19.6■□□□□ 0.73
ABCA8-210ENST00000588458 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
ABCA8-210ENST00000588458 XIRP1Q702N8 1843 aaKnown RBP19.58■□□□□ 0.73
ABCA8-210ENST00000588458 NKTRP30414 1462 aaKnown RBP19.56■□□□□ 0.72
ABCA8-210ENST00000588458 UNC13BO14795 1591 aa19.55■□□□□ 0.72
ABCA8-210ENST00000588458 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
ABCA8-210ENST00000588458 RGS17Q9UGC6 210 aaPredicted RBP19.54■□□□□ 0.72
ABCA8-210ENST00000588458 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
ABCA8-210ENST00000588458 GCC2Q8IWJ2 1684 aa19.52■□□□□ 0.72
ABCA8-210ENST00000588458 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
ABCA8-210ENST00000588458 AMOTL2Q9Y2J4 779 aa19.51■□□□□ 0.71
ABCA8-210ENST00000588458 E9PCH4 1651 aa19.51■□□□□ 0.71
ABCA8-210ENST00000588458 NWD1Q149M9 1564 aa19.5■□□□□ 0.71
ABCA8-210ENST00000588458 ATF3P18847 181 aa19.5■□□□□ 0.71
ABCA8-210ENST00000588458 C19orf44Q9H6X5 657 aa19.5■□□□□ 0.71
ABCA8-210ENST00000588458 ADAMTS13Q76LX8 1427 aa19.5■□□□□ 0.71
ABCA8-210ENST00000588458 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
ABCA8-210ENST00000588458 CADPS2Q86UW7 1296 aa19.48■□□□□ 0.71
ABCA8-210ENST00000588458 ROBO1Q9Y6N7 1651 aa19.48■□□□□ 0.71
ABCA8-210ENST00000588458 PIK3R4Q99570 1358 aa19.47■□□□□ 0.71
ABCA8-210ENST00000588458 NCOA3Q9Y6Q9 1424 aa19.47■□□□□ 0.71
ABCA8-210ENST00000588458 POTEAQ6S8J7 498 aa19.46■□□□□ 0.71
ABCA8-210ENST00000588458 CHD2O14647 1828 aaKnown RBP19.46■□□□□ 0.71
ABCA8-210ENST00000588458 TRIM52Q96A61 297 aa19.45■□□□□ 0.7
ABCA8-210ENST00000588458 JCADQ9P266 1359 aa19.44■□□□□ 0.7
ABCA8-210ENST00000588458 PTPRUQ92729 1446 aa19.42■□□□□ 0.7
ABCA8-210ENST00000588458 DIP2AQ14689 1571 aa19.4■□□□□ 0.7
ABCA8-210ENST00000588458 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
ABCA8-210ENST00000588458 TRPM2O94759 1503 aa19.38■□□□□ 0.69
ABCA8-210ENST00000588458 MEX3CQ5U5Q3 659 aaKnown RBP19.38■□□□□ 0.69
ABCA8-210ENST00000588458 NAIPQ13075 1403 aa19.37■□□□□ 0.69
ABCA8-210ENST00000588458 BRINP3Q76B58 766 aa19.37■□□□□ 0.69
ABCA8-210ENST00000588458 PHLPP1O60346 1717 aa19.37■□□□□ 0.69
ABCA8-210ENST00000588458 METP08581 1390 aa19.36■□□□□ 0.69
ABCA8-210ENST00000588458 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
ABCA8-210ENST00000588458 VGFO15240 615 aaPredicted RBP19.34■□□□□ 0.69
ABCA8-210ENST00000588458 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
ABCA8-210ENST00000588458 SPATA31A6Q5VVP1 1343 aa19.33■□□□□ 0.69
ABCA8-210ENST00000588458 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.68
ABCA8-210ENST00000588458 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.68
ABCA8-210ENST00000588458 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.68
ABCA8-210ENST00000588458 SPHKAPQ2M3C7 1700 aa19.33■□□□□ 0.68
ABCA8-210ENST00000588458 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
ABCA8-210ENST00000588458 ZNF772Q68DY9 489 aaPredicted RBP19.29■□□□□ 0.68
ABCA8-210ENST00000588458 COL16A1Q07092 1604 aaPredicted RBP19.29■□□□□ 0.68
ABCA8-210ENST00000588458 DCCP43146 1447 aa19.28■□□□□ 0.68
ABCA8-210ENST00000588458 FOXD1Q16676 465 aa19.28■□□□□ 0.68
ABCA8-210ENST00000588458 CLTCL1P53675 1640 aa19.28■□□□□ 0.68
ABCA8-210ENST00000588458 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
ABCA8-210ENST00000588458 HFM1A2PYH4 1435 aa19.27■□□□□ 0.68
ABCA8-210ENST00000588458 NRXN3Q9Y4C0 1643 aa19.27■□□□□ 0.68
ABCA8-210ENST00000588458 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
ABCA8-210ENST00000588458 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
ABCA8-210ENST00000588458 MST1RQ04912 1400 aa19.25■□□□□ 0.67
ABCA8-210ENST00000588458 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
ABCA8-210ENST00000588458 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
ABCA8-210ENST00000588458 LRP6O75581 1613 aa19.24■□□□□ 0.67
ABCA8-210ENST00000588458 XRN1Q8IZH2 1706 aaKnown RBP19.23■□□□□ 0.67
ABCA8-210ENST00000588458 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
ABCA8-210ENST00000588458 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
ABCA8-210ENST00000588458 ASXL1Q8IXJ9 1541 aa19.21■□□□□ 0.67
ABCA8-210ENST00000588458 KIF1BO60333 1816 aa19.21■□□□□ 0.67
ABCA8-210ENST00000588458 RXRBP28702 533 aa19.21■□□□□ 0.67
ABCA8-210ENST00000588458 ROBO2Q9HCK4 1378 aa19.19■□□□□ 0.66
ABCA8-210ENST00000588458 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
ABCA8-210ENST00000588458 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
ABCA8-210ENST00000588458 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
ABCA8-210ENST00000588458 C8orf37Q96NL8 207 aa19.18■□□□□ 0.66
ABCA8-210ENST00000588458 AFF2P51816 1311 aa19.18■□□□□ 0.66
ABCA8-210ENST00000588458 STK26Q9P289 416 aa19.17■□□□□ 0.66
ABCA8-210ENST00000588458 C1orf167Q5SNV9 1468 aa19.16■□□□□ 0.66
ABCA8-210ENST00000588458 ADGRF5Q8IZF2 1346 aa19.16■□□□□ 0.66
ABCA8-210ENST00000588458 SHPRHQ149N8 1683 aa19.15■□□□□ 0.66
ABCA8-210ENST00000588458 ADAMTS2O95450 1211 aa19.15■□□□□ 0.66
ABCA8-210ENST00000588458 PTCH1Q13635 1447 aa19.15■□□□□ 0.66
ABCA8-210ENST00000588458 NGLY1Q96IV0 654 aa19.14■□□□□ 0.65
ABCA8-210ENST00000588458 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
ABCA8-210ENST00000588458 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
ABCA8-210ENST00000588458 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.65
ABCA8-210ENST00000588458 ESCO1Q5FWF5 840 aa19.12■□□□□ 0.65
ABCA8-210ENST00000588458 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
ABCA8-210ENST00000588458 TMEM132EQ6IEE7 984 aa19.11■□□□□ 0.65
ABCA8-210ENST00000588458 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
ABCA8-210ENST00000588458 UPF1Q92900 1129 aaKnown RBP eCLIP19.11■□□□□ 0.65
ABCA8-210ENST00000588458 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
ABCA8-210ENST00000588458 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
ABCA8-210ENST00000588458 SETD1AO15047 1707 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms