RNA–Protein interactions for RNA: ENST00000588118.5

DNMT1-214, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-214ENST00000588118 ADAMTSL3P82987 1691 aa19.24■□□□□ 0.67
DNMT1-214ENST00000588118 NLRP1Q9C000 1473 aa19.24■□□□□ 0.67
DNMT1-214ENST00000588118 VGFO15240 615 aaPredicted RBP19.24■□□□□ 0.67
DNMT1-214ENST00000588118 HSPA5P11021 654 aaKnown RBP19.24■□□□□ 0.67
DNMT1-214ENST00000588118 NEXMIFQ5QGS0 1516 aa19.24■□□□□ 0.67
DNMT1-214ENST00000588118 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
DNMT1-214ENST00000588118 USP47Q96K76 1375 aa19.22■□□□□ 0.67
DNMT1-214ENST00000588118 A2ML1A8K2U0 1454 aa19.21■□□□□ 0.67
DNMT1-214ENST00000588118 ADGRF5Q8IZF2 1346 aa19.21■□□□□ 0.67
DNMT1-214ENST00000588118 RIMS1Q86UR5 1692 aaKnown RBP19.2■□□□□ 0.66
DNMT1-214ENST00000588118 PIK3C2GO75747 1445 aa19.18■□□□□ 0.66
DNMT1-214ENST00000588118 CEBPAP49715 358 aaPredicted RBP19.18■□□□□ 0.66
DNMT1-214ENST00000588118 HDGFP51858 240 aaKnown RBP19.18■□□□□ 0.66
DNMT1-214ENST00000588118 MYO5BQ9ULV0 1848 aa19.18■□□□□ 0.66
DNMT1-214ENST00000588118 NBPF1Q3BBV0 1214 aa19.17■□□□□ 0.66
DNMT1-214ENST00000588118 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
DNMT1-214ENST00000588118 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
DNMT1-214ENST00000588118 RIMS2Q9UQ26 1411 aa19.15■□□□□ 0.66
DNMT1-214ENST00000588118 SETBP1Q9Y6X0 1596 aa19.15■□□□□ 0.66
DNMT1-214ENST00000588118 HIRIP3Q9BW71 556 aaPredicted RBP19.14■□□□□ 0.65
DNMT1-214ENST00000588118 C14orf93Q9H972 538 aaKnown RBP19.14■□□□□ 0.65
DNMT1-214ENST00000588118 CFAP70Q5T0N1 1121 aa19.13■□□□□ 0.65
DNMT1-214ENST00000588118 SCAF11Q99590 1463 aaKnown RBP19.13■□□□□ 0.65
DNMT1-214ENST00000588118 UBR1Q8IWV7 1749 aa19.13■□□□□ 0.65
DNMT1-214ENST00000588118 EIF3AQ14152 1382 aaKnown RBP19.11■□□□□ 0.65
DNMT1-214ENST00000588118 TMEM2Q9UHN6 1383 aa19.1■□□□□ 0.65
DNMT1-214ENST00000588118 IQGAP1P46940 1657 aa19.1■□□□□ 0.65
DNMT1-214ENST00000588118 MYO3AQ8NEV4 1616 aa19.1■□□□□ 0.65
DNMT1-214ENST00000588118 ST20-MTHFSA0A0A6YYL1 179 aa19.08■□□□□ 0.64
DNMT1-214ENST00000588118 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
DNMT1-214ENST00000588118 THEMISQ8N1K5 641 aaPredicted RBP19.08■□□□□ 0.64
DNMT1-214ENST00000588118 SLC24A1O60721 1099 aa19.07■□□□□ 0.64
DNMT1-214ENST00000588118 NUTM2DQ5VT03 806 aaPredicted RBP19.07■□□□□ 0.64
DNMT1-214ENST00000588118 PTPRMP28827 1452 aa19.06■□□□□ 0.64
DNMT1-214ENST00000588118 ADGRB1O14514 1584 aa19.06■□□□□ 0.64
DNMT1-214ENST00000588118 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
DNMT1-214ENST00000588118 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
DNMT1-214ENST00000588118 SLIT1O75093 1534 aa19.05■□□□□ 0.64
DNMT1-214ENST00000588118 CEP170BQ9Y4F5 1589 aaPredicted RBP19.05■□□□□ 0.64
DNMT1-214ENST00000588118 SETD1BQ9UPS6 1966 aaKnown RBP19.04■□□□□ 0.64
DNMT1-214ENST00000588118 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
DNMT1-214ENST00000588118 EID1Q9Y6B2 187 aa19.04■□□□□ 0.64
DNMT1-214ENST00000588118 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
DNMT1-214ENST00000588118 ZNF142P52746 1687 aaPredicted RBP19.02■□□□□ 0.64
DNMT1-214ENST00000588118 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
DNMT1-214ENST00000588118 KIF7Q2M1P5 1343 aa19■□□□□ 0.63
DNMT1-214ENST00000588118 TMF1P82094 1093 aa19■□□□□ 0.63
DNMT1-214ENST00000588118 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
DNMT1-214ENST00000588118 PLEKHG1Q9ULL1 1385 aa19■□□□□ 0.63
DNMT1-214ENST00000588118 C11orf95C9JLR9 678 aaPredicted RBP18.99■□□□□ 0.63
DNMT1-214ENST00000588118 TXNDC2Q86VQ3 553 aa18.99■□□□□ 0.63
DNMT1-214ENST00000588118 TESK2Q96S53 571 aa18.99■□□□□ 0.63
DNMT1-214ENST00000588118 SBNO2Q9Y2G9 1366 aa18.98■□□□□ 0.63
DNMT1-214ENST00000588118 ASXL1Q8IXJ9 1541 aa18.97■□□□□ 0.63
DNMT1-214ENST00000588118 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
DNMT1-214ENST00000588118 TMEM132EQ6IEE7 984 aa18.97■□□□□ 0.63
DNMT1-214ENST00000588118 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
DNMT1-214ENST00000588118 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
DNMT1-214ENST00000588118 YTHDC2Q9H6S0 1430 aaKnown RBP18.95■□□□□ 0.62
DNMT1-214ENST00000588118 TRAK1Q9UPV9 953 aa18.95■□□□□ 0.62
DNMT1-214ENST00000588118 LTKP29376 864 aa18.94■□□□□ 0.62
DNMT1-214ENST00000588118 SETD1AO15047 1707 aaKnown RBP18.94■□□□□ 0.62
DNMT1-214ENST00000588118 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
DNMT1-214ENST00000588118 BCANQ96GW7 911 aa18.93■□□□□ 0.62
DNMT1-214ENST00000588118 DLC1Q96QB1 1528 aa18.92■□□□□ 0.62
DNMT1-214ENST00000588118 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
DNMT1-214ENST00000588118 ARHGEF28Q8N1W1 1705 aaKnown RBP18.91■□□□□ 0.62
DNMT1-214ENST00000588118 ANKLE2Q86XL3 938 aa18.91■□□□□ 0.62
DNMT1-214ENST00000588118 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
DNMT1-214ENST00000588118 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
DNMT1-214ENST00000588118 DISP3Q9P2K9 1392 aa18.9■□□□□ 0.62
DNMT1-214ENST00000588118 MED14O60244 1454 aa18.9■□□□□ 0.62
DNMT1-214ENST00000588118 TBX22Q9Y458 520 aa18.89■□□□□ 0.61
DNMT1-214ENST00000588118 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
DNMT1-214ENST00000588118 SIRT1Q96EB6 747 aa18.88■□□□□ 0.61
DNMT1-214ENST00000588118 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
DNMT1-214ENST00000588118 STK26Q9P289 416 aa18.88■□□□□ 0.61
DNMT1-214ENST00000588118 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
DNMT1-214ENST00000588118 METP08581 1390 aa18.87■□□□□ 0.61
DNMT1-214ENST00000588118 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
DNMT1-214ENST00000588118 TECPR2O15040 1411 aa18.86■□□□□ 0.61
DNMT1-214ENST00000588118 PUS7Q96PZ0 661 aaKnown RBP18.86■□□□□ 0.61
DNMT1-214ENST00000588118 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
DNMT1-214ENST00000588118 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
DNMT1-214ENST00000588118 ANP32CO43423 234 aa18.85■□□□□ 0.61
DNMT1-214ENST00000588118 POGKQ9P215 609 aa18.85■□□□□ 0.61
DNMT1-214ENST00000588118 FAM135BQ49AJ0 1406 aa18.84■□□□□ 0.61
DNMT1-214ENST00000588118 MIER1Q8N108 512 aa18.84■□□□□ 0.61
DNMT1-214ENST00000588118 EVC2Q86UK5 1308 aa18.83■□□□□ 0.61
DNMT1-214ENST00000588118 PRAM1Q96QH2 718 aa18.83■□□□□ 0.6
DNMT1-214ENST00000588118 CPS1P31327 1500 aa18.82■□□□□ 0.6
DNMT1-214ENST00000588118 SLC26A8Q96RN1 970 aa18.81■□□□□ 0.6
DNMT1-214ENST00000588118 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
DNMT1-214ENST00000588118 PTCH1Q13635 1447 aa18.76■□□□□ 0.59
DNMT1-214ENST00000588118 TULP4Q9NRJ4 1543 aa18.76■□□□□ 0.59
DNMT1-214ENST00000588118 PTPRUQ92729 1446 aa18.75■□□□□ 0.59
DNMT1-214ENST00000588118 NINLQ9Y2I6 1382 aa18.75■□□□□ 0.59
DNMT1-214ENST00000588118 ATAD2Q6PL18 1390 aa18.74■□□□□ 0.59
DNMT1-214ENST00000588118 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
DNMT1-214ENST00000588118 AMOTL2Q9Y2J4 779 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms