RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, human

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-210	ENST00000587429	RIMS2	Q9UQ26	1411 aa		32.73	■■■□□ 2.83
PKN1-210	ENST00000587429	BCAN	Q96GW7	911 aa		32.72	■■■□□ 2.83
PKN1-210	ENST00000587429	ALK	Q9UM73	1620 aa		32.72	■■■□□ 2.83
PKN1-210	ENST00000587429	XIRP1	Q702N8	1843 aa	Known RBP	32.68	■■■□□ 2.82
PKN1-210	ENST00000587429	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.68	■■■□□ 2.82
PKN1-210	ENST00000587429	PPP1R15A	O75807	674 aa	Predicted RBP	32.67	■■■□□ 2.82
PKN1-210	ENST00000587429	KCNA6	P17658	529 aa		32.66	■■■□□ 2.82
PKN1-210	ENST00000587429	HDGF	P51858	240 aa	Known RBP	32.66	■■■□□ 2.82
PKN1-210	ENST00000587429	PLEKHG1	Q9ULL1	1385 aa		32.65	■■■□□ 2.82
PKN1-210	ENST00000587429	HFM1	A2PYH4	1435 aa		32.64	■■■□□ 2.82
PKN1-210	ENST00000587429	HSPA1L	P34931	641 aa		32.64	■■■□□ 2.82
PKN1-210	ENST00000587429	SPHKAP	Q2M3C7	1700 aa		32.64	■■■□□ 2.82
PKN1-210	ENST00000587429	DISP3	Q9P2K9	1392 aa		32.61	■■■□□ 2.81
PKN1-210	ENST00000587429	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.61	■■■□□ 2.81
PKN1-210	ENST00000587429	TRIM52	Q96A61	297 aa		32.61	■■■□□ 2.81
PKN1-210	ENST00000587429	RBM33	Q96EV2	1170 aa	Known RBP	32.6	■■■□□ 2.81
PKN1-210	ENST00000587429	PROSER2	Q86WR7	435 aa	Predicted RBP	32.58	■■■□□ 2.81
PKN1-210	ENST00000587429	TMEM94	Q12767	1356 aa		32.58	■■■□□ 2.81
PKN1-210	ENST00000587429	TBX22	Q9Y458	520 aa		32.54	■■■□□ 2.8
PKN1-210	ENST00000587429	CHD2	O14647	1828 aa	Known RBP	32.54	■■■□□ 2.8
PKN1-210	ENST00000587429	NWD1	Q149M9	1564 aa		32.53	■■■□□ 2.8
PKN1-210	ENST00000587429	ADAMTS13	Q76LX8	1427 aa		32.51	■■■□□ 2.8
PKN1-210	ENST00000587429	CLTCL1	P53675	1640 aa		32.51	■■■□□ 2.79
PKN1-210	ENST00000587429	ZNF326	Q5BKZ1	582 aa	Known RBP	32.5	■■■□□ 2.79
PKN1-210	ENST00000587429	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.49	■■■□□ 2.79
PKN1-210	ENST00000587429	NKTR	P30414	1462 aa	Known RBP	32.48	■■■□□ 2.79
PKN1-210	ENST00000587429	TRPM2	O94759	1503 aa		32.47	■■■□□ 2.79
PKN1-210	ENST00000587429	ILDR2	Q71H61	639 aa		32.44	■■■□□ 2.78
PKN1-210	ENST00000587429	KIF1B	O60333	1816 aa		32.42	■■■□□ 2.78
PKN1-210	ENST00000587429	DIP2A	Q14689	1571 aa		32.41	■■■□□ 2.78
PKN1-210	ENST00000587429	FOXD1	Q16676	465 aa		32.4	■■■□□ 2.78
PKN1-210	ENST00000587429	NRXN3	Q9Y4C0	1643 aa		32.38	■■■□□ 2.77
PKN1-210	ENST00000587429	PIK3R4	Q99570	1358 aa		32.36	■■■□□ 2.77
PKN1-210	ENST00000587429	NEXMIF	Q5QGS0	1516 aa		32.36	■■■□□ 2.77
PKN1-210	ENST00000587429	PTPRU	Q92729	1446 aa		32.35	■■■□□ 2.77
PKN1-210	ENST00000587429	MSH6	P52701	1360 aa		32.35	■■■□□ 2.77
PKN1-210	ENST00000587429	AMOTL2	Q9Y2J4	779 aa		32.34	■■■□□ 2.77
PKN1-210	ENST00000587429	FAM135B	Q49AJ0	1406 aa		32.34	■■■□□ 2.77
PKN1-210	ENST00000587429	SETBP1	Q9Y6X0	1596 aa		32.33	■■■□□ 2.77
PKN1-210	ENST00000587429	MPHOSPH9	Q99550	1183 aa		32.3	■■■□□ 2.76
PKN1-210	ENST00000587429	MED1	Q15648	1581 aa	Predicted RBP	32.29	■■■□□ 2.76
PKN1-210	ENST00000587429	MET	P08581	1390 aa		32.29	■■■□□ 2.76
PKN1-210	ENST00000587429	ROBO1	Q9Y6N7	1651 aa		32.28	■■■□□ 2.76
PKN1-210	ENST00000587429	C14orf37	Q86TY3	774 aa		32.28	■■■□□ 2.76
PKN1-210	ENST00000587429	SLAIN2	Q9P270	581 aa		32.28	■■■□□ 2.76
PKN1-210	ENST00000587429	NCOA3	Q9Y6Q9	1424 aa		32.26	■■■□□ 2.75
PKN1-210	ENST00000587429	SETD5	Q9C0A6	1442 aa		32.25	■■■□□ 2.75
PKN1-210	ENST00000587429	XRN1	Q8IZH2	1706 aa	Known RBP	32.22	■■■□□ 2.75
PKN1-210	ENST00000587429	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.22	■■■□□ 2.75
PKN1-210	ENST00000587429	VGF	O15240	615 aa	Predicted RBP	32.21	■■■□□ 2.75
PKN1-210	ENST00000587429	C19orf44	Q9H6X5	657 aa		32.21	■■■□□ 2.75
PKN1-210	ENST00000587429	RPGRIP1L	Q68CZ1	1315 aa		32.2	■■■□□ 2.74
PKN1-210	ENST00000587429	PPL	O60437	1756 aa		32.17	■■■□□ 2.74
PKN1-210	ENST00000587429	CCDC144A	A2RUR9	1427 aa		32.17	■■■□□ 2.74
PKN1-210	ENST00000587429	ATF3	P18847	181 aa		32.15	■■■□□ 2.74
PKN1-210	ENST00000587429	RGL3	Q3MIN7	710 aa		32.15	■■■□□ 2.74
PKN1-210	ENST00000587429	CADPS2	Q86UW7	1296 aa		32.15	■■■□□ 2.74
PKN1-210	ENST00000587429	RAB3GAP2	Q9H2M9	1393 aa		32.14	■■■□□ 2.74
PKN1-210	ENST00000587429	SETD1A	O15047	1707 aa	Known RBP	32.12	■■■□□ 2.73
PKN1-210	ENST00000587429	SPATA31E1	Q6ZUB1	1445 aa		32.1	■■■□□ 2.73
PKN1-210	ENST00000587429	PHLPP1	O60346	1717 aa		32.09	■■■□□ 2.73
PKN1-210	ENST00000587429	ACIN1	Q9UKV3	1341 aa	Known RBP	32.08	■■■□□ 2.73
PKN1-210	ENST00000587429	PHF23	Q9BUL5	403 aa	Predicted RBP	32.08	■■■□□ 2.73
PKN1-210	ENST00000587429	ADGRF5	Q8IZF2	1346 aa		32.07	■■■□□ 2.72
PKN1-210	ENST00000587429	SOCS7	O14512	581 aa		32.07	■■■□□ 2.72
PKN1-210	ENST00000587429	DCC	P43146	1447 aa		32.01	■■■□□ 2.72
PKN1-210	ENST00000587429	IFT172	Q9UG01	1749 aa		32.01	■■■□□ 2.72
PKN1-210	ENST00000587429	ROBO2	Q9HCK4	1378 aa		32.01	■■■□□ 2.71
PKN1-210	ENST00000587429	BRINP3	Q76B58	766 aa		32	■■■□□ 2.71
PKN1-210	ENST00000587429	NALCN	Q8IZF0	1738 aa		32	■■■□□ 2.71
PKN1-210	ENST00000587429	ADGRL3	Q9HAR2	1447 aa		32	■■■□□ 2.71
PKN1-210	ENST00000587429	ANKRD30B	Q9BXX2	1392 aa		31.98	■■■□□ 2.71
PKN1-210	ENST00000587429	COL16A1	Q07092	1604 aa	Predicted RBP	31.98	■■■□□ 2.71
PKN1-210	ENST00000587429	MST1R	Q04912	1400 aa		31.98	■■■□□ 2.71
PKN1-210	ENST00000587429	PTCH1	Q13635	1447 aa		31.96	■■■□□ 2.71
PKN1-210	ENST00000587429	RGS17	Q9UGC6	210 aa	Predicted RBP	31.96	■■■□□ 2.71
PKN1-210	ENST00000587429	JCAD	Q9P266	1359 aa		31.94	■■■□□ 2.7
PKN1-210	ENST00000587429	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.93	■■■□□ 2.7
PKN1-210	ENST00000587429	PRAG1	Q86YV5	1406 aa		31.91	■■■□□ 2.7
PKN1-210	ENST00000587429	TMEM132E	Q6IEE7	984 aa		31.9	■■■□□ 2.7
PKN1-210	ENST00000587429	STK26	Q9P289	416 aa		31.9	■■■□□ 2.7
PKN1-210	ENST00000587429	ASXL1	Q8IXJ9	1541 aa		31.9	■■■□□ 2.7
PKN1-210	ENST00000587429	PIK3C2G	O75747	1445 aa		31.88	■■■□□ 2.69
PKN1-210	ENST00000587429	HRC	P23327	699 aa		31.87	■■■□□ 2.69
PKN1-210	ENST00000587429	DDX17	Q92841	729 aa	Known RBP	31.86	■■■□□ 2.69
PKN1-210	ENST00000587429	C1orf167	Q5SNV9	1468 aa		31.84	■■■□□ 2.69
PKN1-210	ENST00000587429	WAPL	Q7Z5K2	1190 aa		31.83	■■■□□ 2.69
PKN1-210	ENST00000587429	LRPPRC	P42704	1394 aa	Known RBP	31.82	■■■□□ 2.69
PKN1-210	ENST00000587429	C14orf93	Q9H972	538 aa	Known RBP	31.81	■■■□□ 2.68
PKN1-210	ENST00000587429	NHSL1	Q5SYE7	1610 aa		31.81	■■■□□ 2.68
PKN1-210	ENST00000587429	NRXN1	Q9ULB1	1477 aa		31.79	■■■□□ 2.68
PKN1-210	ENST00000587429	CFAP70	Q5T0N1	1121 aa		31.79	■■■□□ 2.68
PKN1-210	ENST00000587429	POTEA	Q6S8J7	498 aa		31.79	■■■□□ 2.68
PKN1-210	ENST00000587429	ORAI2	Q96SN7	254 aa		31.79	■■■□□ 2.68
PKN1-210	ENST00000587429	ABCC11	Q96J66	1382 aa		31.79	■■■□□ 2.68
PKN1-210	ENST00000587429	TECPR2	O15040	1411 aa		31.78	■■■□□ 2.68
PKN1-210	ENST00000587429	SHPRH	Q149N8	1683 aa		31.78	■■■□□ 2.68
PKN1-210	ENST00000587429	LRP6	O75581	1613 aa		31.78	■■■□□ 2.68
PKN1-210	ENST00000587429	SPATA31A6	Q5VVP1	1343 aa		31.77	■■■□□ 2.68
PKN1-210	ENST00000587429	PLEKHH1	Q9ULM0	1364 aa		31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms