RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 ZFYVE9O95405 1425 aa24.12■■□□□ 1.45
VAT1-205ENST00000587173 RBM33Q96EV2 1170 aaKnown RBP24.12■■□□□ 1.45
VAT1-205ENST00000587173 RIMS2Q9UQ26 1411 aa24.11■■□□□ 1.45
VAT1-205ENST00000587173 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
VAT1-205ENST00000587173 PLEKHG1Q9ULL1 1385 aa24.1■■□□□ 1.45
VAT1-205ENST00000587173 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
VAT1-205ENST00000587173 NWD1Q149M9 1564 aa24.1■■□□□ 1.45
VAT1-205ENST00000587173 FAM135BQ49AJ0 1406 aa24.1■■□□□ 1.45
VAT1-205ENST00000587173 GCC2Q8IWJ2 1684 aa24.09■■□□□ 1.45
VAT1-205ENST00000587173 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
VAT1-205ENST00000587173 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
VAT1-205ENST00000587173 ITGAEP38570 1179 aa24.08■■□□□ 1.45
VAT1-205ENST00000587173 TMEM131LA2VDJ0 1609 aa24.07■■□□□ 1.44
VAT1-205ENST00000587173 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
VAT1-205ENST00000587173 NUP155O75694 1391 aa24.04■■□□□ 1.44
VAT1-205ENST00000587173 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
VAT1-205ENST00000587173 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.04■■□□□ 1.44
VAT1-205ENST00000587173 E9PCH4 1651 aa24.04■■□□□ 1.44
VAT1-205ENST00000587173 MSH6P52701 1360 aa24.03■■□□□ 1.44
VAT1-205ENST00000587173 MYO5BQ9ULV0 1848 aa24.03■■□□□ 1.44
VAT1-205ENST00000587173 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
VAT1-205ENST00000587173 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
VAT1-205ENST00000587173 ROBO1Q9Y6N7 1651 aa23.99■■□□□ 1.43
VAT1-205ENST00000587173 ADAMTS13Q76LX8 1427 aa23.97■■□□□ 1.43
VAT1-205ENST00000587173 SLAIN2Q9P270 581 aa23.95■■□□□ 1.42
VAT1-205ENST00000587173 CHD2O14647 1828 aaKnown RBP23.95■■□□□ 1.42
VAT1-205ENST00000587173 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
VAT1-205ENST00000587173 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
VAT1-205ENST00000587173 NCOA3Q9Y6Q9 1424 aa23.92■■□□□ 1.42
VAT1-205ENST00000587173 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
VAT1-205ENST00000587173 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
VAT1-205ENST00000587173 TRPM2O94759 1503 aa23.87■■□□□ 1.41
VAT1-205ENST00000587173 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
VAT1-205ENST00000587173 PTPRUQ92729 1446 aa23.84■■□□□ 1.41
VAT1-205ENST00000587173 RRBP1Q9P2E9 1410 aaKnown RBP23.84■■□□□ 1.41
VAT1-205ENST00000587173 JCADQ9P266 1359 aa23.84■■□□□ 1.41
VAT1-205ENST00000587173 ZNF326Q5BKZ1 582 aaKnown RBP23.84■■□□□ 1.41
VAT1-205ENST00000587173 CADPS2Q86UW7 1296 aa23.84■■□□□ 1.41
VAT1-205ENST00000587173 C19orf44Q9H6X5 657 aa23.84■■□□□ 1.41
VAT1-205ENST00000587173 PHLPP1O60346 1717 aa23.84■■□□□ 1.41
VAT1-205ENST00000587173 SPHKAPQ2M3C7 1700 aa23.84■■□□□ 1.41
VAT1-205ENST00000587173 ATF3P18847 181 aa23.83■■□□□ 1.41
VAT1-205ENST00000587173 POTEAQ6S8J7 498 aa23.81■■□□□ 1.4
VAT1-205ENST00000587173 NAIPQ13075 1403 aa23.8■■□□□ 1.4
VAT1-205ENST00000587173 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.79■■□□□ 1.4
VAT1-205ENST00000587173 SETBP1Q9Y6X0 1596 aa23.79■■□□□ 1.4
VAT1-205ENST00000587173 COL16A1Q07092 1604 aaPredicted RBP23.78■■□□□ 1.4
VAT1-205ENST00000587173 NRXN3Q9Y4C0 1643 aa23.78■■□□□ 1.4
VAT1-205ENST00000587173 CLTCL1P53675 1640 aa23.76■■□□□ 1.39
VAT1-205ENST00000587173 METP08581 1390 aa23.75■■□□□ 1.39
VAT1-205ENST00000587173 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
VAT1-205ENST00000587173 XRN1Q8IZH2 1706 aaKnown RBP23.74■■□□□ 1.39
VAT1-205ENST00000587173 DCCP43146 1447 aa23.74■■□□□ 1.39
VAT1-205ENST00000587173 NEXMIFQ5QGS0 1516 aa23.73■■□□□ 1.39
VAT1-205ENST00000587173 BRINP3Q76B58 766 aa23.72■■□□□ 1.39
VAT1-205ENST00000587173 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
VAT1-205ENST00000587173 SPATA31A6Q5VVP1 1343 aa23.72■■□□□ 1.39
VAT1-205ENST00000587173 LRP6O75581 1613 aa23.7■■□□□ 1.38
VAT1-205ENST00000587173 HFM1A2PYH4 1435 aa23.69■■□□□ 1.38
VAT1-205ENST00000587173 MEX3CQ5U5Q3 659 aaKnown RBP23.68■■□□□ 1.38
VAT1-205ENST00000587173 MST1RQ04912 1400 aa23.67■■□□□ 1.38
VAT1-205ENST00000587173 ASXL1Q8IXJ9 1541 aa23.66■■□□□ 1.38
VAT1-205ENST00000587173 SLC4A1APQ9BWU0 796 aaKnown RBP23.65■■□□□ 1.38
VAT1-205ENST00000587173 ADGRL3Q9HAR2 1447 aa23.65■■□□□ 1.38
VAT1-205ENST00000587173 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
VAT1-205ENST00000587173 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
VAT1-205ENST00000587173 KIF1BO60333 1816 aa23.63■■□□□ 1.37
VAT1-205ENST00000587173 ZNF772Q68DY9 489 aaPredicted RBP23.6■■□□□ 1.37
VAT1-205ENST00000587173 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
VAT1-205ENST00000587173 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
VAT1-205ENST00000587173 NUTM2BA6NNL0 878 aaPredicted RBP23.59■■□□□ 1.37
VAT1-205ENST00000587173 NUTM2EB1AL46 878 aaPredicted RBP23.59■■□□□ 1.37
VAT1-205ENST00000587173 NUTM2AQ8IVF1 878 aaPredicted RBP23.59■■□□□ 1.37
VAT1-205ENST00000587173 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
VAT1-205ENST00000587173 NALCNQ8IZF0 1738 aa23.57■■□□□ 1.36
VAT1-205ENST00000587173 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
VAT1-205ENST00000587173 DDX17Q92841 729 aaKnown RBP23.56■■□□□ 1.36
VAT1-205ENST00000587173 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
VAT1-205ENST00000587173 FOXD1Q16676 465 aa23.55■■□□□ 1.36
VAT1-205ENST00000587173 LRRC59Q96AG4 307 aaKnown RBP23.55■■□□□ 1.36
VAT1-205ENST00000587173 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
VAT1-205ENST00000587173 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
VAT1-205ENST00000587173 PRAG1Q86YV5 1406 aa23.51■■□□□ 1.35
VAT1-205ENST00000587173 PNPLA6Q8IY17 1366 aa23.5■■□□□ 1.35
VAT1-205ENST00000587173 AFF2P51816 1311 aa23.49■■□□□ 1.35
VAT1-205ENST00000587173 CCDC144AA2RUR9 1427 aa23.49■■□□□ 1.35
VAT1-205ENST00000587173 PPLO60437 1756 aa23.48■■□□□ 1.35
VAT1-205ENST00000587173 RXRBP28702 533 aa23.47■■□□□ 1.35
VAT1-205ENST00000587173 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
VAT1-205ENST00000587173 ADGRF5Q8IZF2 1346 aa23.45■■□□□ 1.34
VAT1-205ENST00000587173 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
VAT1-205ENST00000587173 C8orf37Q96NL8 207 aa23.45■■□□□ 1.34
VAT1-205ENST00000587173 MPHOSPH9Q99550 1183 aa23.44■■□□□ 1.34
VAT1-205ENST00000587173 SPATA31E1Q6ZUB1 1445 aa23.42■■□□□ 1.34
VAT1-205ENST00000587173 SOS2Q07890 1332 aaPredicted RBP23.42■■□□□ 1.34
VAT1-205ENST00000587173 LAMC1P11047 1609 aa23.41■■□□□ 1.34
VAT1-205ENST00000587173 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
VAT1-205ENST00000587173 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.341e-26■■■□□ 15.6
VAT1-205ENST00000587173 CDK12Q9NYV4 1490 aaPredicted RBP23.4■■□□□ 1.34
VAT1-205ENST00000587173 ADAMTS2O95450 1211 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms