RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 PLEKHG1Q9ULL1 1385 aa21.51■■□□□ 1.03
HDAC5-203ENST00000586339 CHD2O14647 1828 aaKnown RBP21.51■■□□□ 1.03
HDAC5-203ENST00000586339 KCNA6P17658 529 aa21.51■■□□□ 1.03
HDAC5-203ENST00000586339 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
HDAC5-203ENST00000586339 HDGFP51858 240 aaKnown RBP21.5■■□□□ 1.03
HDAC5-203ENST00000586339 NUP155O75694 1391 aa21.49■■□□□ 1.03
HDAC5-203ENST00000586339 SPHKAPQ2M3C7 1700 aa21.49■■□□□ 1.03
HDAC5-203ENST00000586339 RRBP1Q9P2E9 1410 aaKnown RBP21.48■■□□□ 1.03
HDAC5-203ENST00000586339 SOCS7O14512 581 aa21.48■■□□□ 1.03
HDAC5-203ENST00000586339 SLC26A8Q96RN1 970 aa21.48■■□□□ 1.03
HDAC5-203ENST00000586339 TMEM94Q12767 1356 aa21.48■■□□□ 1.03
HDAC5-203ENST00000586339 DIP2AQ14689 1571 aa21.47■■□□□ 1.03
HDAC5-203ENST00000586339 ITGAEP38570 1179 aa21.46■■□□□ 1.03
HDAC5-203ENST00000586339 PPP1R15AO75807 674 aaPredicted RBP21.45■■□□□ 1.02
HDAC5-203ENST00000586339 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.45■■□□□ 1.02
HDAC5-203ENST00000586339 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
HDAC5-203ENST00000586339 BCANQ96GW7 911 aa21.43■■□□□ 1.02
HDAC5-203ENST00000586339 FAM135BQ49AJ0 1406 aa21.43■■□□□ 1.02
HDAC5-203ENST00000586339 PROSER2Q86WR7 435 aaPredicted RBP21.41■■□□□ 1.02
HDAC5-203ENST00000586339 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
HDAC5-203ENST00000586339 ROBO1Q9Y6N7 1651 aa21.4■■□□□ 1.02
HDAC5-203ENST00000586339 TBX22Q9Y458 520 aa21.39■■□□□ 1.01
HDAC5-203ENST00000586339 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
HDAC5-203ENST00000586339 MSH6P52701 1360 aa21.38■■□□□ 1.01
HDAC5-203ENST00000586339 PIK3R4Q99570 1358 aa21.38■■□□□ 1.01
HDAC5-203ENST00000586339 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
HDAC5-203ENST00000586339 NAIPQ13075 1403 aa21.37■■□□□ 1.01
HDAC5-203ENST00000586339 TRPM2O94759 1503 aa21.36■■□□□ 1.01
HDAC5-203ENST00000586339 KIF1BO60333 1816 aa21.35■■□□□ 1.01
HDAC5-203ENST00000586339 SETBP1Q9Y6X0 1596 aa21.33■■□□□ 1.01
HDAC5-203ENST00000586339 CLTCL1P53675 1640 aa21.33■■□□□ 1
HDAC5-203ENST00000586339 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1
HDAC5-203ENST00000586339 HFM1A2PYH4 1435 aa21.32■■□□□ 1
HDAC5-203ENST00000586339 RBM33Q96EV2 1170 aaKnown RBP21.31■■□□□ 1
HDAC5-203ENST00000586339 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
HDAC5-203ENST00000586339 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
HDAC5-203ENST00000586339 XRN1Q8IZH2 1706 aaKnown RBP21.29■■□□□ 1
HDAC5-203ENST00000586339 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.29■■□□□ 1
HDAC5-203ENST00000586339 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
HDAC5-203ENST00000586339 PHLPP1O60346 1717 aa21.28■■□□□ 1
HDAC5-203ENST00000586339 NEXMIFQ5QGS0 1516 aa21.27■■□□□ 1
HDAC5-203ENST00000586339 SLAIN2Q9P270 581 aa21.26■□□□□ 0.99
HDAC5-203ENST00000586339 PTPRUQ92729 1446 aa21.23■□□□□ 0.99
HDAC5-203ENST00000586339 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
HDAC5-203ENST00000586339 DCCP43146 1447 aa21.22■□□□□ 0.99
HDAC5-203ENST00000586339 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
HDAC5-203ENST00000586339 C14orf37Q86TY3 774 aa21.21■□□□□ 0.99
HDAC5-203ENST00000586339 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
HDAC5-203ENST00000586339 AMOTL2Q9Y2J4 779 aa21.21■□□□□ 0.99
HDAC5-203ENST00000586339 COL16A1Q07092 1604 aaPredicted RBP21.21■□□□□ 0.99
HDAC5-203ENST00000586339 AHDC1Q5TGY3 1603 aaPredicted RBP21.19■□□□□ 0.98
HDAC5-203ENST00000586339 SETD1AO15047 1707 aaKnown RBP21.18■□□□□ 0.98
HDAC5-203ENST00000586339 ATF3P18847 181 aa21.17■□□□□ 0.98
HDAC5-203ENST00000586339 TRIM52Q96A61 297 aa21.17■□□□□ 0.98
HDAC5-203ENST00000586339 JCADQ9P266 1359 aa21.17■□□□□ 0.98
HDAC5-203ENST00000586339 PPLO60437 1756 aa21.17■□□□□ 0.98
HDAC5-203ENST00000586339 METP08581 1390 aa21.15■□□□□ 0.98
HDAC5-203ENST00000586339 SLC4A1APQ9BWU0 796 aaKnown RBP21.15■□□□□ 0.98
HDAC5-203ENST00000586339 SHPRHQ149N8 1683 aa21.14■□□□□ 0.97
HDAC5-203ENST00000586339 RGS17Q9UGC6 210 aaPredicted RBP21.13■□□□□ 0.97
HDAC5-203ENST00000586339 NALCNQ8IZF0 1738 aa21.12■□□□□ 0.97
HDAC5-203ENST00000586339 RPGRIP1LQ68CZ1 1315 aa21.12■□□□□ 0.97
HDAC5-203ENST00000586339 VGFO15240 615 aaPredicted RBP21.11■□□□□ 0.97
HDAC5-203ENST00000586339 PTCH1Q13635 1447 aa21.11■□□□□ 0.97
HDAC5-203ENST00000586339 PRAG1Q86YV5 1406 aa21.11■□□□□ 0.97
HDAC5-203ENST00000586339 ADGRL3Q9HAR2 1447 aa21.11■□□□□ 0.97
HDAC5-203ENST00000586339 NHSL1Q5SYE7 1610 aa21.1■□□□□ 0.97
HDAC5-203ENST00000586339 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
HDAC5-203ENST00000586339 MST1RQ04912 1400 aa21.08■□□□□ 0.97
HDAC5-203ENST00000586339 SPATA31A6Q5VVP1 1343 aa21.07■□□□□ 0.96
HDAC5-203ENST00000586339 BRINP3Q76B58 766 aa21.07■□□□□ 0.96
HDAC5-203ENST00000586339 IFT172Q9UG01 1749 aa21.07■□□□□ 0.96
HDAC5-203ENST00000586339 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
HDAC5-203ENST00000586339 CCDC144AA2RUR9 1427 aa21.05■□□□□ 0.96
HDAC5-203ENST00000586339 LRP6O75581 1613 aa21.02■□□□□ 0.96
HDAC5-203ENST00000586339 SETD5Q9C0A6 1442 aa21.02■□□□□ 0.96
HDAC5-203ENST00000586339 LAMC1P11047 1609 aa21■□□□□ 0.95
HDAC5-203ENST00000586339 POTEAQ6S8J7 498 aa21■□□□□ 0.95
HDAC5-203ENST00000586339 SPATA31E1Q6ZUB1 1445 aa21■□□□□ 0.95
HDAC5-203ENST00000586339 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
HDAC5-203ENST00000586339 ANKRD30BQ9BXX2 1392 aa20.98■□□□□ 0.95
HDAC5-203ENST00000586339 ROBO2Q9HCK4 1378 aa20.98■□□□□ 0.95
HDAC5-203ENST00000586339 FOXD1Q16676 465 aa20.98■□□□□ 0.95
HDAC5-203ENST00000586339 C1orf167Q5SNV9 1468 aa20.97■□□□□ 0.95
HDAC5-203ENST00000586339 KNDC1Q76NI1 1749 aa20.97■□□□□ 0.95
HDAC5-203ENST00000586339 CDC42BPGQ6DT37 1551 aa20.95■□□□□ 0.94
HDAC5-203ENST00000586339 MEX3CQ5U5Q3 659 aaKnown RBP20.94■□□□□ 0.94
HDAC5-203ENST00000586339 TECPR2O15040 1411 aa20.94■□□□□ 0.94
HDAC5-203ENST00000586339 LRRC59Q96AG4 307 aaKnown RBP20.93■□□□□ 0.94
HDAC5-203ENST00000586339 ZNF772Q68DY9 489 aaPredicted RBP20.92■□□□□ 0.94
HDAC5-203ENST00000586339 ADGRF5Q8IZF2 1346 aa20.92■□□□□ 0.94
HDAC5-203ENST00000586339 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
HDAC5-203ENST00000586339 PNPLA6Q8IY17 1366 aa20.89■□□□□ 0.93
HDAC5-203ENST00000586339 RGL3Q3MIN7 710 aa20.89■□□□□ 0.93
HDAC5-203ENST00000586339 LRPPRCP42704 1394 aaKnown RBP20.88■□□□□ 0.93
HDAC5-203ENST00000586339 MYOM2P54296 1465 aa20.87■□□□□ 0.93
HDAC5-203ENST00000586339 ABCC11Q96J66 1382 aa20.86■□□□□ 0.93
HDAC5-203ENST00000586339 NRXN1Q9ULB1 1477 aa20.86■□□□□ 0.93
HDAC5-203ENST00000586339 RAB3GAP2Q9H2M9 1393 aa20.85■□□□□ 0.93
HDAC5-203ENST00000586339 SOS2Q07890 1332 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms