RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	UBAP1L	F5GYI3	381 aa		24.96	■■□□□ 1.59
CIRBP-204	ENST00000585630	CLTCL1	P53675	1640 aa		24.96	■■□□□ 1.59
CIRBP-204	ENST00000585630	PLEKHG1	Q9ULL1	1385 aa		24.93	■■□□□ 1.58
CIRBP-204	ENST00000585630	KIF1B	O60333	1816 aa		24.92	■■□□□ 1.58
CIRBP-204	ENST00000585630	DIP2A	Q14689	1571 aa		24.92	■■□□□ 1.58
CIRBP-204	ENST00000585630	CHD2	O14647	1828 aa	Known RBP	24.91	■■□□□ 1.58
CIRBP-204	ENST00000585630	NKTR	P30414	1462 aa	Known RBP	24.9	■■□□□ 1.58
CIRBP-204	ENST00000585630	CHGA	P10645	457 aa	Known RBP	24.86	■■□□□ 1.57
CIRBP-204	ENST00000585630	TOM1	O60784	492 aa		24.85	■■□□□ 1.57
CIRBP-204	ENST00000585630	SLC26A8	Q96RN1	970 aa		24.85	■■□□□ 1.57
CIRBP-204	ENST00000585630	NRXN3	Q9Y4C0	1643 aa		24.84	■■□□□ 1.57
CIRBP-204	ENST00000585630	PPP1R15A	O75807	674 aa	Predicted RBP	24.84	■■□□□ 1.57
CIRBP-204	ENST00000585630	HDGF	P51858	240 aa	Known RBP	24.84	■■□□□ 1.57
CIRBP-204	ENST00000585630	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	24.84	■■□□□ 1.57
CIRBP-204	ENST00000585630	NEXMIF	Q5QGS0	1516 aa		24.82	■■□□□ 1.56
CIRBP-204	ENST00000585630	ADAMTS13	Q76LX8	1427 aa		24.82	■■□□□ 1.56
CIRBP-204	ENST00000585630	SETBP1	Q9Y6X0	1596 aa		24.82	■■□□□ 1.56
CIRBP-204	ENST00000585630	KCNA6	P17658	529 aa		24.8	■■□□□ 1.56
CIRBP-204	ENST00000585630	TRIM52	Q96A61	297 aa		24.8	■■□□□ 1.56
CIRBP-204	ENST00000585630	SCAF1	Q9H7N4	1312 aa	Known RBP	24.8	■■□□□ 1.56
CIRBP-204	ENST00000585630	BCAN	Q96GW7	911 aa		24.78	■■□□□ 1.56
CIRBP-204	ENST00000585630	PIP4K2B	P78356	416 aa		24.77	■■□□□ 1.56
CIRBP-204	ENST00000585630	TMEM94	Q12767	1356 aa		24.77	■■□□□ 1.56
CIRBP-204	ENST00000585630	SLC4A1AP	Q9BWU0	796 aa	Known RBP	24.76	■■□□□ 1.55
CIRBP-204	ENST00000585630	XRN1	Q8IZH2	1706 aa	Known RBP	24.75	■■□□□ 1.55
CIRBP-204	ENST00000585630	PPL	O60437	1756 aa		24.75	■■□□□ 1.55
CIRBP-204	ENST00000585630	NUTM2D	Q5VT03	806 aa	Predicted RBP	24.74	■■□□□ 1.55
CIRBP-204	ENST00000585630	SENP3	Q9H4L4	574 aa	Predicted RBP	24.74	■■□□□ 1.55
CIRBP-204	ENST00000585630	TBX22	Q9Y458	520 aa		24.74	■■□□□ 1.55
CIRBP-204	ENST00000585630	PIK3R4	Q99570	1358 aa		24.74	■■□□□ 1.55
CIRBP-204	ENST00000585630	DISP3	Q9P2K9	1392 aa		24.71	■■□□□ 1.55
CIRBP-204	ENST00000585630	SETD1A	O15047	1707 aa	Known RBP	24.71	■■□□□ 1.55
CIRBP-204	ENST00000585630	SETD5	Q9C0A6	1442 aa		24.7	■■□□□ 1.55
CIRBP-204	ENST00000585630	ZNF326	Q5BKZ1	582 aa	Known RBP	24.69	■■□□□ 1.54
CIRBP-204	ENST00000585630	IFT172	Q9UG01	1749 aa		24.69	■■□□□ 1.54
CIRBP-204	ENST00000585630	HSPA1L	P34931	641 aa		24.68	■■□□□ 1.54
CIRBP-204	ENST00000585630	PROSER2	Q86WR7	435 aa	Predicted RBP	24.68	■■□□□ 1.54
CIRBP-204	ENST00000585630	ROBO1	Q9Y6N7	1651 aa		24.67	■■□□□ 1.54
CIRBP-204	ENST00000585630	ACIN1	Q9UKV3	1341 aa	Known RBP	24.65	■■□□□ 1.54
CIRBP-204	ENST00000585630	PTPRU	Q92729	1446 aa		24.65	■■□□□ 1.54
CIRBP-204	ENST00000585630	NCOA3	Q9Y6Q9	1424 aa		24.65	■■□□□ 1.54
CIRBP-204	ENST00000585630	MSH6	P52701	1360 aa		24.65	■■□□□ 1.54
CIRBP-204	ENST00000585630	CCDC144A	A2RUR9	1427 aa		24.64	■■□□□ 1.54
CIRBP-204	ENST00000585630	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	24.64	■■□□□ 1.53
CIRBP-204	ENST00000585630	RBM33	Q96EV2	1170 aa	Known RBP	24.62	■■□□□ 1.53
CIRBP-204	ENST00000585630	RAB3GAP2	Q9H2M9	1393 aa		24.62	■■□□□ 1.53
CIRBP-204	ENST00000585630	MED1	Q15648	1581 aa	Predicted RBP	24.62	■■□□□ 1.53
CIRBP-204	ENST00000585630	FOXD1	Q16676	465 aa		24.61	■■□□□ 1.53
CIRBP-204	ENST00000585630	MPHOSPH9	Q99550	1183 aa		24.61	■■□□□ 1.53
CIRBP-204	ENST00000585630	FAM135B	Q49AJ0	1406 aa		24.61	■■□□□ 1.53
CIRBP-204	ENST00000585630	SPATA31E1	Q6ZUB1	1445 aa		24.59	■■□□□ 1.53
CIRBP-204	ENST00000585630	MET	P08581	1390 aa		24.58	■■□□□ 1.53
CIRBP-204	ENST00000585630	RPGRIP1L	Q68CZ1	1315 aa		24.58	■■□□□ 1.52
CIRBP-204	ENST00000585630	NALCN	Q8IZF0	1738 aa		24.56	■■□□□ 1.52
CIRBP-204	ENST00000585630	AMOTL2	Q9Y2J4	779 aa		24.54	■■□□□ 1.52
CIRBP-204	ENST00000585630	DCC	P43146	1447 aa		24.53	■■□□□ 1.52
CIRBP-204	ENST00000585630	PRAG1	Q86YV5	1406 aa		24.53	■■□□□ 1.52
CIRBP-204	ENST00000585630	VGF	O15240	615 aa	Predicted RBP	24.53	■■□□□ 1.52
CIRBP-204	ENST00000585630	PHLPP1	O60346	1717 aa		24.52	■■□□□ 1.52
CIRBP-204	ENST00000585630	PTCH1	Q13635	1447 aa		24.51	■■□□□ 1.51
CIRBP-204	ENST00000585630	C14orf37	Q86TY3	774 aa		24.48	■■□□□ 1.51
CIRBP-204	ENST00000585630	COL16A1	Q07092	1604 aa	Predicted RBP	24.47	■■□□□ 1.51
CIRBP-204	ENST00000585630	ADGRL3	Q9HAR2	1447 aa		24.47	■■□□□ 1.51
CIRBP-204	ENST00000585630	ANKRD30B	Q9BXX2	1392 aa		24.47	■■□□□ 1.51
CIRBP-204	ENST00000585630	KNDC1	Q76NI1	1749 aa		24.47	■■□□□ 1.51
CIRBP-204	ENST00000585630	ILDR2	Q71H61	639 aa		24.46	■■□□□ 1.51
CIRBP-204	ENST00000585630	C19orf44	Q9H6X5	657 aa		24.46	■■□□□ 1.51
CIRBP-204	ENST00000585630	SLAIN2	Q9P270	581 aa		24.46	■■□□□ 1.51
CIRBP-204	ENST00000585630	LAMC1	P11047	1609 aa		24.46	■■□□□ 1.51
CIRBP-204	ENST00000585630	AHDC1	Q5TGY3	1603 aa	Predicted RBP	24.46	■■□□□ 1.51
CIRBP-204	ENST00000585630	ASXL1	Q8IXJ9	1541 aa		24.45	■■□□□ 1.5
CIRBP-204	ENST00000585630	PIK3C2G	O75747	1445 aa		24.44	■■□□□ 1.5
CIRBP-204	ENST00000585630	CADPS2	Q86UW7	1296 aa		24.44	■■□□□ 1.5
CIRBP-204	ENST00000585630	MYOM2	P54296	1465 aa		24.43	■■□□□ 1.5
CIRBP-204	ENST00000585630	ADGRF5	Q8IZF2	1346 aa		24.41	■■□□□ 1.5
CIRBP-204	ENST00000585630	ATF3	P18847	181 aa		24.41	■■□□□ 1.5
CIRBP-204	ENST00000585630	NHSL1	Q5SYE7	1610 aa		24.41	■■□□□ 1.5
CIRBP-204	ENST00000585630	NRXN1	Q9ULB1	1477 aa		24.4	■■□□□ 1.5
CIRBP-204	ENST00000585630	HRC	P23327	699 aa		24.4	■■□□□ 1.5
CIRBP-204	ENST00000585630	RGL3	Q3MIN7	710 aa		24.4	■■□□□ 1.5
CIRBP-204	ENST00000585630	MST1R	Q04912	1400 aa		24.4	■■□□□ 1.5
CIRBP-204	ENST00000585630	ROBO2	Q9HCK4	1378 aa		24.39	■■□□□ 1.49
CIRBP-204	ENST00000585630	TECPR2	O15040	1411 aa		24.37	■■□□□ 1.49
CIRBP-204	ENST00000585630	SHPRH	Q149N8	1683 aa		24.37	■■□□□ 1.49
CIRBP-204	ENST00000585630	CDC42BPG	Q6DT37	1551 aa		24.36	■■□□□ 1.49
CIRBP-204	ENST00000585630	PHF23	Q9BUL5	403 aa	Predicted RBP	24.34	■■□□□ 1.49
CIRBP-204	ENST00000585630	SOCS7	O14512	581 aa		24.32	■■□□□ 1.48
CIRBP-204	ENST00000585630	LRPPRC	P42704	1394 aa	Known RBP	24.3	■■□□□ 1.48
CIRBP-204	ENST00000585630	BRINP3	Q76B58	766 aa		24.3	■■□□□ 1.48
CIRBP-204	ENST00000585630	JCAD	Q9P266	1359 aa		24.29	■■□□□ 1.48
CIRBP-204	ENST00000585630	C1orf167	Q5SNV9	1468 aa		24.27	■■□□□ 1.48
CIRBP-204	ENST00000585630	YTHDC2	Q9H6S0	1430 aa	Known RBP	24.27	■■□□□ 1.48
CIRBP-204	ENST00000585630	ABCC11	Q96J66	1382 aa		24.26	■■□□□ 1.47
CIRBP-204	ENST00000585630	FMN2	Q9NZ56	1722 aa		24.24	■■□□□ 1.47
CIRBP-204	ENST00000585630	ADGRB1	O14514	1584 aa		24.23	■■□□□ 1.47
CIRBP-204	ENST00000585630	C14orf93	Q9H972	538 aa	Known RBP	24.22	■■□□□ 1.47
CIRBP-204	ENST00000585630	LRP6	O75581	1613 aa		24.21	■■□□□ 1.47
CIRBP-204	ENST00000585630	DLC1	Q96QB1	1528 aa		24.2	■■□□□ 1.47
CIRBP-204	ENST00000585630	TMEM132E	Q6IEE7	984 aa		24.2	■■□□□ 1.46
CIRBP-204	ENST00000585630	STK26	Q9P289	416 aa		24.19	■■□□□ 1.46

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