RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 BCANQ96GW7 911 aa22.38■■□□□ 1.17
SDF2-202ENST00000585428 ADGRB3O60242 1522 aa22.36■■□□□ 1.17
SDF2-202ENST00000585428 SLAIN2Q9P270 581 aa22.36■■□□□ 1.17
SDF2-202ENST00000585428 TBX22Q9Y458 520 aa22.36■■□□□ 1.17
SDF2-202ENST00000585428 ZFYVE9O95405 1425 aa22.36■■□□□ 1.17
SDF2-202ENST00000585428 PLEKHG1Q9ULL1 1385 aa22.35■■□□□ 1.17
SDF2-202ENST00000585428 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
SDF2-202ENST00000585428 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.32■■□□□ 1.16
SDF2-202ENST00000585428 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
SDF2-202ENST00000585428 ROCK1Q13464 1354 aa22.3■■□□□ 1.16
SDF2-202ENST00000585428 PPP1R15AO75807 674 aaPredicted RBP22.3■■□□□ 1.16
SDF2-202ENST00000585428 MSH6P52701 1360 aa22.29■■□□□ 1.16
SDF2-202ENST00000585428 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
SDF2-202ENST00000585428 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
SDF2-202ENST00000585428 POTEAQ6S8J7 498 aa22.27■■□□□ 1.16
SDF2-202ENST00000585428 TMEM131LA2VDJ0 1609 aa22.27■■□□□ 1.16
SDF2-202ENST00000585428 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
SDF2-202ENST00000585428 NUTM2DQ5VT03 806 aaPredicted RBP22.26■■□□□ 1.15
SDF2-202ENST00000585428 ROBO1Q9Y6N7 1651 aa22.23■■□□□ 1.15
SDF2-202ENST00000585428 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
SDF2-202ENST00000585428 NUP155O75694 1391 aa22.23■■□□□ 1.15
SDF2-202ENST00000585428 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
SDF2-202ENST00000585428 UNC13BO14795 1591 aa22.21■■□□□ 1.15
SDF2-202ENST00000585428 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
SDF2-202ENST00000585428 PIK3R4Q99570 1358 aa22.2■■□□□ 1.14
SDF2-202ENST00000585428 GCC2Q8IWJ2 1684 aa22.18■■□□□ 1.14
SDF2-202ENST00000585428 JCADQ9P266 1359 aa22.18■■□□□ 1.14
SDF2-202ENST00000585428 ITGAEP38570 1179 aa22.18■■□□□ 1.14
SDF2-202ENST00000585428 CADPS2Q86UW7 1296 aa22.18■■□□□ 1.14
SDF2-202ENST00000585428 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
SDF2-202ENST00000585428 E9PCH4 1651 aa22.17■■□□□ 1.14
SDF2-202ENST00000585428 MYO5BQ9ULV0 1848 aa22.17■■□□□ 1.14
SDF2-202ENST00000585428 C14orf37Q86TY3 774 aa22.16■■□□□ 1.14
SDF2-202ENST00000585428 IQGAP3Q86VI3 1631 aa22.14■■□□□ 1.14
SDF2-202ENST00000585428 ATF3P18847 181 aa22.14■■□□□ 1.13
SDF2-202ENST00000585428 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
SDF2-202ENST00000585428 PTPRUQ92729 1446 aa22.13■■□□□ 1.13
SDF2-202ENST00000585428 DIP2AQ14689 1571 aa22.1■■□□□ 1.13
SDF2-202ENST00000585428 SPATA31A6Q5VVP1 1343 aa22.09■■□□□ 1.13
SDF2-202ENST00000585428 PHLPP1O60346 1717 aa22.09■■□□□ 1.13
SDF2-202ENST00000585428 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
SDF2-202ENST00000585428 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
SDF2-202ENST00000585428 ZNF326Q5BKZ1 582 aaKnown RBP22.05■■□□□ 1.12
SDF2-202ENST00000585428 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
SDF2-202ENST00000585428 TRPM2O94759 1503 aa22.05■■□□□ 1.12
SDF2-202ENST00000585428 METP08581 1390 aa22.04■■□□□ 1.12
SDF2-202ENST00000585428 DCCP43146 1447 aa22.01■■□□□ 1.11
SDF2-202ENST00000585428 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
SDF2-202ENST00000585428 LRP6O75581 1613 aa22.01■■□□□ 1.11
SDF2-202ENST00000585428 AHDC1Q5TGY3 1603 aaPredicted RBP22.01■■□□□ 1.11
SDF2-202ENST00000585428 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
SDF2-202ENST00000585428 MEX3CQ5U5Q3 659 aaKnown RBP21.99■■□□□ 1.11
SDF2-202ENST00000585428 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
SDF2-202ENST00000585428 LRRC59Q96AG4 307 aaKnown RBP21.96■■□□□ 1.11
SDF2-202ENST00000585428 MST1RQ04912 1400 aa21.96■■□□□ 1.11
SDF2-202ENST00000585428 NAIPQ13075 1403 aa21.95■■□□□ 1.1
SDF2-202ENST00000585428 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
SDF2-202ENST00000585428 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
SDF2-202ENST00000585428 VGFO15240 615 aaPredicted RBP21.94■■□□□ 1.1
SDF2-202ENST00000585428 NUTM2BA6NNL0 878 aaPredicted RBP21.93■■□□□ 1.1
SDF2-202ENST00000585428 NUTM2EB1AL46 878 aaPredicted RBP21.93■■□□□ 1.1
SDF2-202ENST00000585428 NUTM2AQ8IVF1 878 aaPredicted RBP21.93■■□□□ 1.1
SDF2-202ENST00000585428 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
SDF2-202ENST00000585428 SPHKAPQ2M3C7 1700 aa21.92■■□□□ 1.1
SDF2-202ENST00000585428 RXRBP28702 533 aa21.91■■□□□ 1.1
SDF2-202ENST00000585428 DDX17Q92841 729 aaKnown RBP21.91■■□□□ 1.1
SDF2-202ENST00000585428 NEXMIFQ5QGS0 1516 aa21.9■■□□□ 1.1
SDF2-202ENST00000585428 ASXL1Q8IXJ9 1541 aa21.9■■□□□ 1.1
SDF2-202ENST00000585428 UPF1Q92900 1129 aaKnown RBP eCLIP21.9■■□□□ 1.1
SDF2-202ENST00000585428 SHPRHQ149N8 1683 aa21.9■■□□□ 1.1
SDF2-202ENST00000585428 ADGRL3Q9HAR2 1447 aa21.89■■□□□ 1.1
SDF2-202ENST00000585428 RPGRIP1LQ68CZ1 1315 aa21.89■■□□□ 1.1
SDF2-202ENST00000585428 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
SDF2-202ENST00000585428 CLTCL1P53675 1640 aa21.88■■□□□ 1.09
SDF2-202ENST00000585428 AFF2P51816 1311 aa21.86■■□□□ 1.09
SDF2-202ENST00000585428 SLC4A1APQ9BWU0 796 aaKnown RBP21.85■■□□□ 1.09
SDF2-202ENST00000585428 ROBO2Q9HCK4 1378 aa21.84■■□□□ 1.09
SDF2-202ENST00000585428 C1orf167Q5SNV9 1468 aa21.83■■□□□ 1.09
SDF2-202ENST00000585428 HFM1A2PYH4 1435 aa21.83■■□□□ 1.09
SDF2-202ENST00000585428 ORAI2Q96SN7 254 aa21.83■■□□□ 1.09
SDF2-202ENST00000585428 PNPLA6Q8IY17 1366 aa21.83■■□□□ 1.08
SDF2-202ENST00000585428 QTRT2Q9H974 415 aaKnown RBP21.82■■□□□ 1.08
SDF2-202ENST00000585428 SOS2Q07890 1332 aaPredicted RBP21.81■■□□□ 1.08
SDF2-202ENST00000585428 SETD1AO15047 1707 aaKnown RBP21.81■■□□□ 1.08
SDF2-202ENST00000585428 PTCH1Q13635 1447 aa21.8■■□□□ 1.08
SDF2-202ENST00000585428 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
SDF2-202ENST00000585428 C8orf37Q96NL8 207 aa21.8■■□□□ 1.08
SDF2-202ENST00000585428 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
SDF2-202ENST00000585428 PRAG1Q86YV5 1406 aa21.79■■□□□ 1.08
SDF2-202ENST00000585428 RBM6P78332 1123 aaKnown RBP21.77■■□□□ 1.08
SDF2-202ENST00000585428 FOXD1Q16676 465 aa21.76■■□□□ 1.07
SDF2-202ENST00000585428 NGLY1Q96IV0 654 aa21.76■■□□□ 1.07
SDF2-202ENST00000585428 KIF1BO60333 1816 aa21.76■■□□□ 1.07
SDF2-202ENST00000585428 NALCNQ8IZF0 1738 aa21.75■■□□□ 1.07
SDF2-202ENST00000585428 ADAMTS2O95450 1211 aa21.74■■□□□ 1.07
SDF2-202ENST00000585428 ADGRF5Q8IZF2 1346 aa21.73■■□□□ 1.07
SDF2-202ENST00000585428 LAMC1P11047 1609 aa21.71■■□□□ 1.07
SDF2-202ENST00000585428 FNBP4Q8N3X1 1017 aaPredicted RBP21.71■■□□□ 1.07
SDF2-202ENST00000585428 RGL3Q3MIN7 710 aa21.7■■□□□ 1.06
SDF2-202ENST00000585428 MPHOSPH9Q99550 1183 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms