RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
PGAP3-209ENST00000584620 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
PGAP3-209ENST00000584620 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
PGAP3-209ENST00000584620 MSH6P52701 1360 aa16.8■□□□□ 0.28
PGAP3-209ENST00000584620 NOS1P29475 1434 aa16.79■□□□□ 0.28
PGAP3-209ENST00000584620 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
PGAP3-209ENST00000584620 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
PGAP3-209ENST00000584620 SPATA31A6Q5VVP1 1343 aa16.77■□□□□ 0.28
PGAP3-209ENST00000584620 ANKRD50Q9ULJ7 1429 aa16.77■□□□□ 0.27
PGAP3-209ENST00000584620 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
PGAP3-209ENST00000584620 BCANQ96GW7 911 aa16.76■□□□□ 0.27
PGAP3-209ENST00000584620 NUTM2BA6NNL0 878 aaPredicted RBP16.75■□□□□ 0.27
PGAP3-209ENST00000584620 NUTM2EB1AL46 878 aaPredicted RBP16.75■□□□□ 0.27
PGAP3-209ENST00000584620 NUTM2AQ8IVF1 878 aaPredicted RBP16.75■□□□□ 0.27
PGAP3-209ENST00000584620 TET3O43151 1660 aa16.75■□□□□ 0.27
PGAP3-209ENST00000584620 SLC52A1Q9NWF4 448 aa16.73■□□□□ 0.27
PGAP3-209ENST00000584620 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
PGAP3-209ENST00000584620 KDM5AP29375 1690 aaKnown RBP16.7■□□□□ 0.26
PGAP3-209ENST00000584620 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
PGAP3-209ENST00000584620 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
PGAP3-209ENST00000584620 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
PGAP3-209ENST00000584620 AFF2P51816 1311 aa16.7■□□□□ 0.26
PGAP3-209ENST00000584620 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
PGAP3-209ENST00000584620 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
PGAP3-209ENST00000584620 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
PGAP3-209ENST00000584620 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
PGAP3-209ENST00000584620 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
PGAP3-209ENST00000584620 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
PGAP3-209ENST00000584620 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
PGAP3-209ENST00000584620 RGS12O14924 1447 aa16.65■□□□□ 0.26
PGAP3-209ENST00000584620 QTRT2Q9H974 415 aaKnown RBP16.64■□□□□ 0.25
PGAP3-209ENST00000584620 UNC13BO14795 1591 aa16.64■□□□□ 0.25
PGAP3-209ENST00000584620 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
PGAP3-209ENST00000584620 AHDC1Q5TGY3 1603 aaPredicted RBP16.63■□□□□ 0.25
PGAP3-209ENST00000584620 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
PGAP3-209ENST00000584620 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
PGAP3-209ENST00000584620 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
PGAP3-209ENST00000584620 ATF3P18847 181 aa16.62■□□□□ 0.25
PGAP3-209ENST00000584620 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
PGAP3-209ENST00000584620 RBM6P78332 1123 aaKnown RBP16.61■□□□□ 0.25
PGAP3-209ENST00000584620 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
PGAP3-209ENST00000584620 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
PGAP3-209ENST00000584620 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.6■□□□□ 0.25
PGAP3-209ENST00000584620 ITGAEP38570 1179 aa16.6■□□□□ 0.25
PGAP3-209ENST00000584620 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
PGAP3-209ENST00000584620 DIP2AQ14689 1571 aa16.6■□□□□ 0.25
PGAP3-209ENST00000584620 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
PGAP3-209ENST00000584620 C19orf44Q9H6X5 657 aa16.59■□□□□ 0.25
PGAP3-209ENST00000584620 NUP155O75694 1391 aa16.59■□□□□ 0.25
PGAP3-209ENST00000584620 SETBP1Q9Y6X0 1596 aa16.59■□□□□ 0.25
PGAP3-209ENST00000584620 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
PGAP3-209ENST00000584620 CHGAP10645 457 aaKnown RBP16.58■□□□□ 0.24
PGAP3-209ENST00000584620 E9PCH4 1651 aa16.57■□□□□ 0.24
PGAP3-209ENST00000584620 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
PGAP3-209ENST00000584620 TBX22Q9Y458 520 aa16.57■□□□□ 0.24
PGAP3-209ENST00000584620 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
PGAP3-209ENST00000584620 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
PGAP3-209ENST00000584620 ADAMTS13Q76LX8 1427 aa16.56■□□□□ 0.24
PGAP3-209ENST00000584620 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
PGAP3-209ENST00000584620 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.56■□□□□ 0.24
PGAP3-209ENST00000584620 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
PGAP3-209ENST00000584620 MYO5BQ9ULV0 1848 aa16.54■□□□□ 0.24
PGAP3-209ENST00000584620 FOXD1Q16676 465 aa16.53■□□□□ 0.24
PGAP3-209ENST00000584620 DDX17Q92841 729 aaKnown RBP16.53■□□□□ 0.24
PGAP3-209ENST00000584620 ADAMTS2O95450 1211 aa16.52■□□□□ 0.24
PGAP3-209ENST00000584620 NGLY1Q96IV0 654 aa16.52■□□□□ 0.24
PGAP3-209ENST00000584620 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
PGAP3-209ENST00000584620 SETD5Q9C0A6 1442 aa16.51■□□□□ 0.23
PGAP3-209ENST00000584620 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
PGAP3-209ENST00000584620 RRBP1Q9P2E9 1410 aaKnown RBP16.49■□□□□ 0.23
PGAP3-209ENST00000584620 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
PGAP3-209ENST00000584620 PTPRUQ92729 1446 aa16.48■□□□□ 0.23
PGAP3-209ENST00000584620 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
PGAP3-209ENST00000584620 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
PGAP3-209ENST00000584620 USP21Q9UK80 565 aa16.46■□□□□ 0.23
PGAP3-209ENST00000584620 NAIPQ13075 1403 aa16.45■□□□□ 0.22
PGAP3-209ENST00000584620 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
PGAP3-209ENST00000584620 MST1RQ04912 1400 aa16.44■□□□□ 0.22
PGAP3-209ENST00000584620 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
PGAP3-209ENST00000584620 TRPM2O94759 1503 aa16.42■□□□□ 0.22
PGAP3-209ENST00000584620 METP08581 1390 aa16.41■□□□□ 0.22
PGAP3-209ENST00000584620 ZNF326Q5BKZ1 582 aaKnown RBP16.41■□□□□ 0.22
PGAP3-209ENST00000584620 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
PGAP3-209ENST00000584620 DCCP43146 1447 aa16.4■□□□□ 0.22
PGAP3-209ENST00000584620 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
PGAP3-209ENST00000584620 SPHKAPQ2M3C7 1700 aa16.39■□□□□ 0.21
PGAP3-209ENST00000584620 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
PGAP3-209ENST00000584620 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
PGAP3-209ENST00000584620 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
PGAP3-209ENST00000584620 ATRNO75882 1429 aa16.36■□□□□ 0.21
PGAP3-209ENST00000584620 NEXMIFQ5QGS0 1516 aa16.36■□□□□ 0.21
PGAP3-209ENST00000584620 DEFB132Q7Z7B7 95 aa16.36■□□□□ 0.21
PGAP3-209ENST00000584620 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
PGAP3-209ENST00000584620 EP400Q96L91 3159 aa16.32■□□□□ 0.2
PGAP3-209ENST00000584620 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
PGAP3-209ENST00000584620 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
PGAP3-209ENST00000584620 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
PGAP3-209ENST00000584620 SOS2Q07890 1332 aaPredicted RBP16.3■□□□□ 0.2
PGAP3-209ENST00000584620 GJD4Q96KN9 370 aaPredicted RBP16.3■□□□□ 0.2
PGAP3-209ENST00000584620 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms