RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 SCAF1Q9H7N4 1312 aaKnown RBP30.31■■■□□ 2.44
SNX11-209ENST00000581705 E9PCH4 1651 aa30.31■■■□□ 2.44
SNX11-209ENST00000581705 ALKQ9UM73 1620 aa30.31■■■□□ 2.44
SNX11-209ENST00000581705 TMEM131LA2VDJ0 1609 aa30.26■■■□□ 2.44
SNX11-209ENST00000581705 ZFYVE9O95405 1425 aa30.26■■■□□ 2.43
SNX11-209ENST00000581705 SLC26A8Q96RN1 970 aa30.26■■■□□ 2.43
SNX11-209ENST00000581705 HSPA1LP34931 641 aa30.25■■■□□ 2.43
SNX11-209ENST00000581705 CCER1Q8TC90 406 aaPredicted RBP30.24■■■□□ 2.43
SNX11-209ENST00000581705 MYO5BQ9ULV0 1848 aa30.23■■■□□ 2.43
SNX11-209ENST00000581705 CLSPNQ9HAW4 1339 aa30.23■■■□□ 2.43
SNX11-209ENST00000581705 KCNA6P17658 529 aa30.22■■■□□ 2.43
SNX11-209ENST00000581705 RIMS2Q9UQ26 1411 aa30.22■■■□□ 2.43
SNX11-209ENST00000581705 DHX57Q6P158 1386 aaKnown RBP30.22■■■□□ 2.43
SNX11-209ENST00000581705 HDGFP51858 240 aaKnown RBP30.22■■■□□ 2.43
SNX11-209ENST00000581705 PLEKHG1Q9ULL1 1385 aa30.19■■■□□ 2.42
SNX11-209ENST00000581705 CHGAP10645 457 aaKnown RBP30.18■■■□□ 2.42
SNX11-209ENST00000581705 BCANQ96GW7 911 aa30.18■■■□□ 2.42
SNX11-209ENST00000581705 XIRP1Q702N8 1843 aaKnown RBP30.18■■■□□ 2.42
SNX11-209ENST00000581705 ZEB1P37275 1124 aaPredicted RBP30.17■■■□□ 2.42
SNX11-209ENST00000581705 PPP1R15AO75807 674 aaPredicted RBP30.16■■■□□ 2.42
SNX11-209ENST00000581705 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.15■■■□□ 2.42
SNX11-209ENST00000581705 TMEM94Q12767 1356 aa30.14■■■□□ 2.42
SNX11-209ENST00000581705 NWD1Q149M9 1564 aa30.13■■■□□ 2.41
SNX11-209ENST00000581705 ILDR2Q71H61 639 aa30.13■■■□□ 2.41
SNX11-209ENST00000581705 NKTRP30414 1462 aaKnown RBP30.11■■■□□ 2.41
SNX11-209ENST00000581705 SENP3Q9H4L4 574 aaPredicted RBP30.11■■■□□ 2.41
SNX11-209ENST00000581705 PROSER2Q86WR7 435 aaPredicted RBP30.1■■■□□ 2.41
SNX11-209ENST00000581705 TBX22Q9Y458 520 aa30.09■■■□□ 2.41
SNX11-209ENST00000581705 SPHKAPQ2M3C7 1700 aa30.07■■■□□ 2.4
SNX11-209ENST00000581705 NUTM2DQ5VT03 806 aaPredicted RBP30.06■■■□□ 2.4
SNX11-209ENST00000581705 RBM33Q96EV2 1170 aaKnown RBP30.05■■■□□ 2.4
SNX11-209ENST00000581705 ADAMTS13Q76LX8 1427 aa30.04■■■□□ 2.4
SNX11-209ENST00000581705 CHD2O14647 1828 aaKnown RBP30.04■■■□□ 2.4
SNX11-209ENST00000581705 DIP2AQ14689 1571 aa30■■■□□ 2.39
SNX11-209ENST00000581705 TRIM52Q96A61 297 aa30■■■□□ 2.39
SNX11-209ENST00000581705 FAM135BQ49AJ0 1406 aa30■■■□□ 2.39
SNX11-209ENST00000581705 MED1Q15648 1581 aaPredicted RBP29.99■■■□□ 2.39
SNX11-209ENST00000581705 PIK3R4Q99570 1358 aa29.98■■■□□ 2.39
SNX11-209ENST00000581705 TRPM2O94759 1503 aa29.97■■■□□ 2.39
SNX11-209ENST00000581705 MSH6P52701 1360 aa29.96■■■□□ 2.39
SNX11-209ENST00000581705 CLTCL1P53675 1640 aa29.94■■■□□ 2.38
SNX11-209ENST00000581705 MPHOSPH9Q99550 1183 aa29.94■■■□□ 2.38
SNX11-209ENST00000581705 ZNF326Q5BKZ1 582 aaKnown RBP29.93■■■□□ 2.38
SNX11-209ENST00000581705 NCOA3Q9Y6Q9 1424 aa29.92■■■□□ 2.38
SNX11-209ENST00000581705 SOCS7O14512 581 aa29.91■■■□□ 2.38
SNX11-209ENST00000581705 SETBP1Q9Y6X0 1596 aa29.89■■■□□ 2.38
SNX11-209ENST00000581705 SLC4A1APQ9BWU0 796 aaKnown RBP29.88■■■□□ 2.37
SNX11-209ENST00000581705 NRXN3Q9Y4C0 1643 aa29.88■■■□□ 2.37
SNX11-209ENST00000581705 ROBO1Q9Y6N7 1651 aa29.87■■■□□ 2.37
SNX11-209ENST00000581705 SLAIN2Q9P270 581 aa29.87■■■□□ 2.37
SNX11-209ENST00000581705 PTPRUQ92729 1446 aa29.86■■■□□ 2.37
SNX11-209ENST00000581705 AMOTL2Q9Y2J4 779 aa29.86■■■□□ 2.37
SNX11-209ENST00000581705 NEXMIFQ5QGS0 1516 aa29.86■■■□□ 2.37
SNX11-209ENST00000581705 KIF1BO60333 1816 aa29.84■■■□□ 2.37
SNX11-209ENST00000581705 C14orf37Q86TY3 774 aa29.81■■■□□ 2.36
SNX11-209ENST00000581705 C19orf44Q9H6X5 657 aa29.81■■■□□ 2.36
SNX11-209ENST00000581705 METP08581 1390 aa29.79■■■□□ 2.36
SNX11-209ENST00000581705 XRN1Q8IZH2 1706 aaKnown RBP29.78■■■□□ 2.36
SNX11-209ENST00000581705 CADPS2Q86UW7 1296 aa29.78■■■□□ 2.36
SNX11-209ENST00000581705 PHF23Q9BUL5 403 aaPredicted RBP29.78■■■□□ 2.36
SNX11-209ENST00000581705 TIMELESSQ9UNS1 1208 aa29.76■■■□□ 2.35
SNX11-209ENST00000581705 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.75■■■□□ 2.35
SNX11-209ENST00000581705 ANKRD30BQ9BXX2 1392 aa29.74■■■□□ 2.35
SNX11-209ENST00000581705 ATF3P18847 181 aa29.74■■■□□ 2.35
SNX11-209ENST00000581705 RPGRIP1LQ68CZ1 1315 aa29.74■■■□□ 2.35
SNX11-209ENST00000581705 VGFO15240 615 aaPredicted RBP29.73■■■□□ 2.35
SNX11-209ENST00000581705 FOXD1Q16676 465 aa29.73■■■□□ 2.35
SNX11-209ENST00000581705 DCCP43146 1447 aa29.68■■■□□ 2.34
SNX11-209ENST00000581705 PHLPP1O60346 1717 aa29.67■■■□□ 2.34
SNX11-209ENST00000581705 CCDC144AA2RUR9 1427 aa29.65■■■□□ 2.34
SNX11-209ENST00000581705 PPLO60437 1756 aa29.63■■■□□ 2.33
SNX11-209ENST00000581705 JCADQ9P266 1359 aa29.63■■■□□ 2.33
SNX11-209ENST00000581705 RGS17Q9UGC6 210 aaPredicted RBP29.62■■■□□ 2.33
SNX11-209ENST00000581705 SETD1AO15047 1707 aaKnown RBP29.62■■■□□ 2.33
SNX11-209ENST00000581705 COL16A1Q07092 1604 aaPredicted RBP29.62■■■□□ 2.33
SNX11-209ENST00000581705 SIN3AQ96ST3 1273 aa29.61■■■□□ 2.33
SNX11-209ENST00000581705 ADGRL3Q9HAR2 1447 aa29.6■■■□□ 2.33
SNX11-209ENST00000581705 BRINP3Q76B58 766 aa29.6■■■□□ 2.33
SNX11-209ENST00000581705 AHDC1Q5TGY3 1603 aaPredicted RBP29.6■■■□□ 2.33
SNX11-209ENST00000581705 SPATA31E1Q6ZUB1 1445 aa29.6■■■□□ 2.33
SNX11-209ENST00000581705 MST1RQ04912 1400 aa29.58■■■□□ 2.33
SNX11-209ENST00000581705 PTCH1Q13635 1447 aa29.58■■■□□ 2.33
SNX11-209ENST00000581705 PRAG1Q86YV5 1406 aa29.57■■■□□ 2.32
SNX11-209ENST00000581705 ROBO2Q9HCK4 1378 aa29.54■■■□□ 2.32
SNX11-209ENST00000581705 NEUROD1Q13562 356 aa29.54■■■□□ 2.32
SNX11-209ENST00000581705 RGL3Q3MIN7 710 aa29.54■■■□□ 2.32
SNX11-209ENST00000581705 TONSLQ96HA7 1378 aa29.54■■■□□ 2.32
SNX11-209ENST00000581705 NALCNQ8IZF0 1738 aa29.53■■■□□ 2.32
SNX11-209ENST00000581705 ADGRF5Q8IZF2 1346 aa29.53■■■□□ 2.32
SNX11-209ENST00000581705 ASXL1Q8IXJ9 1541 aa29.53■■■□□ 2.32
SNX11-209ENST00000581705 SPATA31A6Q5VVP1 1343 aa29.49■■■□□ 2.31
SNX11-209ENST00000581705 IFT172Q9UG01 1749 aa29.48■■■□□ 2.31
SNX11-209ENST00000581705 SHPRHQ149N8 1683 aa29.45■■■□□ 2.3
SNX11-209ENST00000581705 POTEAQ6S8J7 498 aa29.45■■■□□ 2.3
SNX11-209ENST00000581705 NHSL1Q5SYE7 1610 aa29.44■■■□□ 2.3
SNX11-209ENST00000581705 LRP6O75581 1613 aa29.43■■■□□ 2.3
SNX11-209ENST00000581705 C1orf167Q5SNV9 1468 aa29.43■■■□□ 2.3
SNX11-209ENST00000581705 PIK3C2GO75747 1445 aa29.42■■■□□ 2.3
SNX11-209ENST00000581705 TECPR2O15040 1411 aa29.4■■■□□ 2.3
SNX11-209ENST00000581705 LRPPRCP42704 1394 aaKnown RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms