RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PRR14Q9BWN1 585 aa10.9□□□□□ -0.66
SMCHD1-205ENST00000581383 IL21Q9HBE4 155 aa10.9□□□□□ -0.66
SMCHD1-205ENST00000581383 HIC1Q14526 733 aa10.88□□□□□ -0.67
SMCHD1-205ENST00000581383 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
SMCHD1-205ENST00000581383 OATP04181 439 aa10.87□□□□□ -0.67
SMCHD1-205ENST00000581383 APLP1P51693 650 aa10.87□□□□□ -0.67
SMCHD1-205ENST00000581383 COPS2P61201 443 aa10.87□□□□□ -0.67
SMCHD1-205ENST00000581383 RCCD1A6NED2 376 aa10.86□□□□□ -0.67
SMCHD1-205ENST00000581383 RSPH4AQ5TD94 716 aa10.86□□□□□ -0.67
SMCHD1-205ENST00000581383 KMT5BQ4FZB7 885 aa10.84□□□□□ -0.67
SMCHD1-205ENST00000581383 TJAP1Q5JTD0 557 aa10.84□□□□□ -0.67
SMCHD1-205ENST00000581383 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
SMCHD1-205ENST00000581383 PCDHB3Q9Y5E6 796 aa10.84□□□□□ -0.67
SMCHD1-205ENST00000581383 GNPATO15228 680 aa10.83□□□□□ -0.68
SMCHD1-205ENST00000581383 TMEM134Q9H6X4 195 aa10.83□□□□□ -0.68
SMCHD1-205ENST00000581383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
SMCHD1-205ENST00000581383 GGCXP38435 758 aa10.82□□□□□ -0.68
SMCHD1-205ENST00000581383 ZNF787Q6DD87 383 aa10.82□□□□□ -0.68
SMCHD1-205ENST00000581383 ZNF516Q92618 1163 aa10.81□□□□□ -0.68
SMCHD1-205ENST00000581383 CFHP08603 1231 aa10.79□□□□□ -0.68
SMCHD1-205ENST00000581383 NRG2O14511 850 aaPredicted RBP10.78□□□□□ -0.68
SMCHD1-205ENST00000581383 PXYLP1Q8TE99 480 aa10.78□□□□□ -0.68
SMCHD1-205ENST00000581383 ZNF775Q96BV0 537 aaPredicted RBP10.78□□□□□ -0.68
SMCHD1-205ENST00000581383 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
SMCHD1-205ENST00000581383 PPP1R18Q6NYC8 613 aa10.76□□□□□ -0.69
SMCHD1-205ENST00000581383 METTL3Q86U44 580 aaKnown RBP10.76□□□□□ -0.69
SMCHD1-205ENST00000581383 FECHP22830 423 aa10.75□□□□□ -0.69
SMCHD1-205ENST00000581383 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.75□□□□□ -0.69
SMCHD1-205ENST00000581383 ZPR1O75312 459 aa10.74□□□□□ -0.69
SMCHD1-205ENST00000581383 BLOC1S3Q6QNY0 202 aa10.74□□□□□ -0.69
SMCHD1-205ENST00000581383 NKX2-3Q8TAU0 364 aa10.74□□□□□ -0.69
SMCHD1-205ENST00000581383 DDX11L8A8MPP1 907 aa10.72□□□□□ -0.69
SMCHD1-205ENST00000581383 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
SMCHD1-205ENST00000581383 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
SMCHD1-205ENST00000581383 PRKD2Q9BZL6 878 aa10.72□□□□□ -0.69
SMCHD1-205ENST00000581383 NR1I2O75469 434 aa10.71□□□□□ -0.69
SMCHD1-205ENST00000581383 SULF1Q8IWU6 871 aa10.69□□□□□ -0.7
SMCHD1-205ENST00000581383 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
SMCHD1-205ENST00000581383 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
SMCHD1-205ENST00000581383 SLC10A3P09131 477 aa10.68□□□□□ -0.7
SMCHD1-205ENST00000581383 TLL1O43897 1013 aa10.66□□□□□ -0.7
SMCHD1-205ENST00000581383 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
SMCHD1-205ENST00000581383 GPR37O15354 613 aa10.65□□□□□ -0.7
SMCHD1-205ENST00000581383 PUS10Q3MIT2 529 aaKnown RBP10.65□□□□□ -0.7
SMCHD1-205ENST00000581383 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
SMCHD1-205ENST00000581383 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
SMCHD1-205ENST00000581383 V9GY48 417 aaPredicted RBP10.63□□□□□ -0.71
SMCHD1-205ENST00000581383 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
SMCHD1-205ENST00000581383 SCUBE3Q8IX30 993 aa10.61□□□□□ -0.71
SMCHD1-205ENST00000581383 S1PR4O95977 384 aa10.6□□□□□ -0.71
SMCHD1-205ENST00000581383 ADH1BP00325 375 aa10.6□□□□□ -0.71
SMCHD1-205ENST00000581383 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
SMCHD1-205ENST00000581383 SLC6A16Q9GZN6 736 aa10.6□□□□□ -0.71
SMCHD1-205ENST00000581383 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
SMCHD1-205ENST00000581383 SPSB2Q99619 263 aa10.59□□□□□ -0.71
SMCHD1-205ENST00000581383 PPEF1O14829 653 aaPredicted RBP10.58□□□□□ -0.72
SMCHD1-205ENST00000581383 ATP6V1AP38606 617 aa10.58□□□□□ -0.72
SMCHD1-205ENST00000581383 SLC19A1P41440 591 aa10.58□□□□□ -0.72
SMCHD1-205ENST00000581383 FUT2Q10981 343 aa10.58□□□□□ -0.72
SMCHD1-205ENST00000581383 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
SMCHD1-205ENST00000581383 IRF6O14896 467 aa10.57□□□□□ -0.72
SMCHD1-205ENST00000581383 PHOX2BQ99453 314 aa10.57□□□□□ -0.72
SMCHD1-205ENST00000581383 GCGRP47871 477 aa10.56□□□□□ -0.72
SMCHD1-205ENST00000581383 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
SMCHD1-205ENST00000581383 PDZRN3Q9UPQ7 1066 aa10.56□□□□□ -0.72
SMCHD1-205ENST00000581383 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
SMCHD1-205ENST00000581383 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
SMCHD1-205ENST00000581383 LMOD2Q6P5Q4 547 aa10.54□□□□□ -0.72
SMCHD1-205ENST00000581383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMCHD1-205ENST00000581383 MORN1Q5T089 497 aa10.52□□□□□ -0.73
SMCHD1-205ENST00000581383 CCDC102AQ96A19 550 aa10.52□□□□□ -0.73
SMCHD1-205ENST00000581383 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
SMCHD1-205ENST00000581383 CLCN1P35523 988 aa10.5□□□□□ -0.73
SMCHD1-205ENST00000581383 Q3C1V9 767 aa10.49□□□□□ -0.73
SMCHD1-205ENST00000581383 KDM4AO75164 1064 aa10.48□□□□□ -0.73
SMCHD1-205ENST00000581383 GPCPD1Q9NPB8 672 aa10.48□□□□□ -0.73
SMCHD1-205ENST00000581383 ZBTB24O43167 697 aaPredicted RBP10.47□□□□□ -0.73
SMCHD1-205ENST00000581383 ZNF697Q5TEC3 545 aa10.47□□□□□ -0.73
SMCHD1-205ENST00000581383 NUTM1Q86Y26 1132 aa10.47□□□□□ -0.73
SMCHD1-205ENST00000581383 CD46P15529 392 aa10.46□□□□□ -0.73
SMCHD1-205ENST00000581383 TTLL12Q14166 644 aaPredicted RBP10.46□□□□□ -0.73
SMCHD1-205ENST00000581383 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
SMCHD1-205ENST00000581383 ZNF598Q86UK7 904 aaKnown RBP10.46□□□□□ -0.73
SMCHD1-205ENST00000581383 FCF1Q9Y324 198 aaKnown RBP10.45□□□□□ -0.74
SMCHD1-205ENST00000581383 PKDCCQ504Y2 493 aa10.44□□□□□ -0.74
SMCHD1-205ENST00000581383 LIAT1Q6ZQX7 453 aa10.44□□□□□ -0.74
SMCHD1-205ENST00000581383 USP46P62068 366 aa10.43□□□□□ -0.74
SMCHD1-205ENST00000581383 FOXC1Q12948 553 aa10.43□□□□□ -0.74
SMCHD1-205ENST00000581383 CD2BP2O95400 341 aaKnown RBP10.42□□□□□ -0.74
SMCHD1-205ENST00000581383 TREML4Q6UXN2 200 aa10.42□□□□□ -0.74
SMCHD1-205ENST00000581383 SALL2Q9Y467 1007 aaPredicted RBP10.42□□□□□ -0.74
SMCHD1-205ENST00000581383 TNFRSF10AO00220 468 aa10.41□□□□□ -0.74
SMCHD1-205ENST00000581383 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
SMCHD1-205ENST00000581383 RNF19BQ6ZMZ0 732 aa10.41□□□□□ -0.74
SMCHD1-205ENST00000581383 LCE2AQ5TA79 106 aaPredicted RBP10.4□□□□□ -0.74
SMCHD1-205ENST00000581383 THAP11Q96EK4 314 aa10.4□□□□□ -0.74
SMCHD1-205ENST00000581383 PRDM9Q9NQV7 894 aa10.4□□□□□ -0.74
SMCHD1-205ENST00000581383 POTECB2RU33 542 aa10.39□□□□□ -0.75
SMCHD1-205ENST00000581383 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
SMCHD1-205ENST00000581383 FAM160A2Q8N612 972 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms