RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 C3orf80F5H4A9 247 aa8.46□□□□□ -1.06
KPNB1-208ENST00000580019 SLF2Q8IX21 1173 aa8.46□□□□□ -1.06
KPNB1-208ENST00000580019 CERKQ8TCT0 537 aa8.46□□□□□ -1.06
KPNB1-208ENST00000580019 AXIN1O15169 862 aa8.45□□□□□ -1.06
KPNB1-208ENST00000580019 NBR1Q14596 966 aa8.45□□□□□ -1.06
KPNB1-208ENST00000580019 LMOD2Q6P5Q4 547 aa8.45□□□□□ -1.06
KPNB1-208ENST00000580019 PRR14Q9BWN1 585 aa8.45□□□□□ -1.06
KPNB1-208ENST00000580019 PCDHB3Q9Y5E6 796 aa8.45□□□□□ -1.06
KPNB1-208ENST00000580019 DPYSL4O14531 572 aa8.44□□□□□ -1.06
KPNB1-208ENST00000580019 AVPP01185 164 aa8.44□□□□□ -1.06
KPNB1-208ENST00000580019 TERTO14746 1132 aaKnown RBP8.43□□□□□ -1.06
KPNB1-208ENST00000580019 PPEF1O14829 653 aaPredicted RBP8.43□□□□□ -1.06
KPNB1-208ENST00000580019 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
KPNB1-208ENST00000580019 CTC1Q2NKJ3 1217 aa8.43□□□□□ -1.06
KPNB1-208ENST00000580019 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
KPNB1-208ENST00000580019 NUDT18Q6ZVK8 323 aa8.42□□□□□ -1.06
KPNB1-208ENST00000580019 S1PR4O95977 384 aa8.41□□□□□ -1.06
KPNB1-208ENST00000580019 SWT1Q5T5J6 900 aaKnown RBP8.41□□□□□ -1.06
KPNB1-208ENST00000580019 BLOC1S3Q6QNY0 202 aa8.41□□□□□ -1.06
KPNB1-208ENST00000580019 TLL1O43897 1013 aa8.4□□□□□ -1.06
KPNB1-208ENST00000580019 FOXC1Q12948 553 aa8.4□□□□□ -1.06
KPNB1-208ENST00000580019 PKD2L1Q9P0L9 805 aa8.4□□□□□ -1.06
KPNB1-208ENST00000580019 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
KPNB1-208ENST00000580019 CAMK2BQ13554 666 aa8.39□□□□□ -1.07
KPNB1-208ENST00000580019 RBM27Q9P2N5 1060 aaKnown RBP8.36□□□□□ -1.07
KPNB1-208ENST00000580019 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
KPNB1-208ENST00000580019 PLA2G2CQ5R387 149 aa8.34□□□□□ -1.07
KPNB1-208ENST00000580019 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
KPNB1-208ENST00000580019 ZSCAN1Q8NBB4 408 aa8.34□□□□□ -1.07
KPNB1-208ENST00000580019 ADH1BP00325 375 aa8.32□□□□□ -1.08
KPNB1-208ENST00000580019 SNRPBP14678 240 aaKnown RBP8.32□□□□□ -1.08
KPNB1-208ENST00000580019 SENP2Q9HC62 589 aa8.32□□□□□ -1.08
KPNB1-208ENST00000580019 GTPBP6O43824 516 aaPredicted RBP8.31□□□□□ -1.08
KPNB1-208ENST00000580019 SLC16A10Q8TF71 515 aa8.31□□□□□ -1.08
KPNB1-208ENST00000580019 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
KPNB1-208ENST00000580019 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
KPNB1-208ENST00000580019 ATP13A2Q9NQ11 1180 aa8.3□□□□□ -1.08
KPNB1-208ENST00000580019 PDIA6Q15084 440 aa8.29□□□□□ -1.08
KPNB1-208ENST00000580019 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
KPNB1-208ENST00000580019 RPIAP49247 311 aa8.28□□□□□ -1.08
KPNB1-208ENST00000580019 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
KPNB1-208ENST00000580019 ACTN4O43707 911 aaKnown RBP8.26□□□□□ -1.09
KPNB1-208ENST00000580019 GMPRP36959 345 aa8.26□□□□□ -1.09
KPNB1-208ENST00000580019 KMT5BQ4FZB7 885 aa8.26□□□□□ -1.09
KPNB1-208ENST00000580019 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
KPNB1-208ENST00000580019 CD2BP2O95400 341 aaKnown RBP8.25□□□□□ -1.09
KPNB1-208ENST00000580019 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
KPNB1-208ENST00000580019 CADPS2Q86UW7 1296 aa8.25□□□□□ -1.09
KPNB1-208ENST00000580019 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
KPNB1-208ENST00000580019 TTC24A2A3L6 582 aaPredicted RBP8.24□□□□□ -1.09
KPNB1-208ENST00000580019 NR1I2O75469 434 aa8.24□□□□□ -1.09
KPNB1-208ENST00000580019 CDHR5Q9HBB8 845 aa8.24□□□□□ -1.09
KPNB1-208ENST00000580019 PADI6Q6TGC4 694 aa8.22□□□□□ -1.09
KPNB1-208ENST00000580019 IRF7Q92985 503 aa8.22□□□□□ -1.09
KPNB1-208ENST00000580019 EYA1Q99502 592 aa8.21□□□□□ -1.1
KPNB1-208ENST00000580019 GRXCR2A6NFK2 248 aa8.2□□□□□ -1.1
KPNB1-208ENST00000580019 NXF1Q9UBU9 619 aaKnown RBP8.2□□□□□ -1.1
KPNB1-208ENST00000580019 KCTD17Q8N5Z5 321 aa8.19□□□□□ -1.1
KPNB1-208ENST00000580019 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
KPNB1-208ENST00000580019 CFHP08603 1231 aa8.17□□□□□ -1.1
KPNB1-208ENST00000580019 SMPD1P17405 629 aa8.17□□□□□ -1.1
KPNB1-208ENST00000580019 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
KPNB1-208ENST00000580019 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
KPNB1-208ENST00000580019 SPSB2Q99619 263 aa8.15□□□□□ -1.1
KPNB1-208ENST00000580019 OSBPP22059 807 aa8.14□□□□□ -1.11
KPNB1-208ENST00000580019 DNAJB2P25686 324 aa8.14□□□□□ -1.11
KPNB1-208ENST00000580019 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
KPNB1-208ENST00000580019 FCF1Q9Y324 198 aaKnown RBP8.13□□□□□ -1.11
KPNB1-208ENST00000580019 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
KPNB1-208ENST00000580019 WNT7AO00755 349 aa8.11□□□□□ -1.11
KPNB1-208ENST00000580019 TMEM134Q9H6X4 195 aa8.11□□□□□ -1.11
KPNB1-208ENST00000580019 H3BM21 787 aa8.1□□□□□ -1.11
KPNB1-208ENST00000580019 J3QL48 77 aa8.08□□□□□ -1.12
KPNB1-208ENST00000580019 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
KPNB1-208ENST00000580019 TMEM151AQ8N4L1 468 aa8.08□□□□□ -1.12
KPNB1-208ENST00000580019 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
KPNB1-208ENST00000580019 VEGFBP49765 207 aa8.07□□□□□ -1.12
KPNB1-208ENST00000580019 GSK3AP49840 483 aa8.07□□□□□ -1.12
KPNB1-208ENST00000580019 RBM46Q8TBY0 533 aaKnown RBP8.07□□□□□ -1.12
KPNB1-208ENST00000580019 HPS1Q92902 700 aa8.07□□□□□ -1.12
KPNB1-208ENST00000580019 SLC10A3P09131 477 aa8.05□□□□□ -1.12
KPNB1-208ENST00000580019 PUS10Q3MIT2 529 aaKnown RBP8.04□□□□□ -1.12
KPNB1-208ENST00000580019 GDF11O95390 407 aa8.03□□□□□ -1.12
KPNB1-208ENST00000580019 XP32Q5T750 250 aa8.03□□□□□ -1.12
KPNB1-208ENST00000580019 MRGPRX2Q96LB1 330 aa8.03□□□□□ -1.12
KPNB1-208ENST00000580019 ARIH1Q9Y4X5 557 aaPredicted RBP8.02□□□□□ -1.13
KPNB1-208ENST00000580019 RCCD1A6NED2 376 aa8.01□□□□□ -1.13
KPNB1-208ENST00000580019 REPIN1Q9BWE0 567 aaKnown RBP8.01□□□□□ -1.13
KPNB1-208ENST00000580019 RASSF7Q02833 373 aa8□□□□□ -1.13
KPNB1-208ENST00000580019 FAM160A2Q8N612 972 aaPredicted RBP7.99□□□□□ -1.13
KPNB1-208ENST00000580019 RNF225M0QZC1 329 aaPredicted RBP7.98□□□□□ -1.13
KPNB1-208ENST00000580019 TRIM32Q13049 653 aa7.98□□□□□ -1.13
KPNB1-208ENST00000580019 RSPH4AQ5TD94 716 aa7.98□□□□□ -1.13
KPNB1-208ENST00000580019 THAP11Q96EK4 314 aa7.98□□□□□ -1.13
KPNB1-208ENST00000580019 ADGRG1Q9Y653 693 aa7.98□□□□□ -1.13
KPNB1-208ENST00000580019 FMNL1O95466 1100 aaPredicted RBP7.97□□□□□ -1.13
KPNB1-208ENST00000580019 E2F4Q16254 413 aa7.96□□□□□ -1.14
KPNB1-208ENST00000580019 TRIM46Q7Z4K8 759 aa7.96□□□□□ -1.14
KPNB1-208ENST00000580019 VSIG8P0DPA2 414 aa7.95□□□□□ -1.14
KPNB1-208ENST00000580019 BMP1P13497 986 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms