RNA–Protein interactions for RNA: ENST00000579378.1

AC011840.3-201, humanhuman

TSL 3 BASIC

Gene AC011840.3, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.3-201ENST00000579378 MSH6P52701 1360 aa13.14□□□□□ -0.31
AC011840.3-201ENST00000579378 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
AC011840.3-201ENST00000579378 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
AC011840.3-201ENST00000579378 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
AC011840.3-201ENST00000579378 NWD1Q149M9 1564 aa13.12□□□□□ -0.31
AC011840.3-201ENST00000579378 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
AC011840.3-201ENST00000579378 JCADQ9P266 1359 aa13.11□□□□□ -0.31
AC011840.3-201ENST00000579378 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
AC011840.3-201ENST00000579378 TBX22Q9Y458 520 aa13.1□□□□□ -0.31
AC011840.3-201ENST00000579378 PLEKHG1Q9ULL1 1385 aa13.09□□□□□ -0.31
AC011840.3-201ENST00000579378 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
AC011840.3-201ENST00000579378 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
AC011840.3-201ENST00000579378 PPP1R15AO75807 674 aaPredicted RBP13.08□□□□□ -0.32
AC011840.3-201ENST00000579378 RPRD2Q5VT52 1461 aaKnown RBP13.08□□□□□ -0.32
AC011840.3-201ENST00000579378 RIMS2Q9UQ26 1411 aa13.07□□□□□ -0.32
AC011840.3-201ENST00000579378 TMEM131LA2VDJ0 1609 aa13.07□□□□□ -0.32
AC011840.3-201ENST00000579378 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
AC011840.3-201ENST00000579378 GCC2Q8IWJ2 1684 aa13.07□□□□□ -0.32
AC011840.3-201ENST00000579378 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
AC011840.3-201ENST00000579378 NCOA3Q9Y6Q9 1424 aa13.06□□□□□ -0.32
AC011840.3-201ENST00000579378 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
AC011840.3-201ENST00000579378 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
AC011840.3-201ENST00000579378 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
AC011840.3-201ENST00000579378 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
AC011840.3-201ENST00000579378 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
AC011840.3-201ENST00000579378 C14orf37Q86TY3 774 aa13.05□□□□□ -0.32
AC011840.3-201ENST00000579378 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
AC011840.3-201ENST00000579378 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
AC011840.3-201ENST00000579378 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
AC011840.3-201ENST00000579378 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
AC011840.3-201ENST00000579378 ATF3P18847 181 aa13.03□□□□□ -0.32
AC011840.3-201ENST00000579378 MEX3CQ5U5Q3 659 aaKnown RBP13.03□□□□□ -0.32
AC011840.3-201ENST00000579378 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
AC011840.3-201ENST00000579378 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
AC011840.3-201ENST00000579378 ADAMTS13Q76LX8 1427 aa13.03□□□□□ -0.32
AC011840.3-201ENST00000579378 LRP6O75581 1613 aa13.02□□□□□ -0.32
AC011840.3-201ENST00000579378 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
AC011840.3-201ENST00000579378 AMOTL2Q9Y2J4 779 aa13.01□□□□□ -0.33
AC011840.3-201ENST00000579378 PIK3R4Q99570 1358 aa13.01□□□□□ -0.33
AC011840.3-201ENST00000579378 E9PCH4 1651 aa13□□□□□ -0.33
AC011840.3-201ENST00000579378 SHPRHQ149N8 1683 aa13□□□□□ -0.33
AC011840.3-201ENST00000579378 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
AC011840.3-201ENST00000579378 RXRBP28702 533 aa12.99□□□□□ -0.33
AC011840.3-201ENST00000579378 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
AC011840.3-201ENST00000579378 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
AC011840.3-201ENST00000579378 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
AC011840.3-201ENST00000579378 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
AC011840.3-201ENST00000579378 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
AC011840.3-201ENST00000579378 PTPRUQ92729 1446 aa12.97□□□□□ -0.33
AC011840.3-201ENST00000579378 UNC13BO14795 1591 aa12.97□□□□□ -0.33
AC011840.3-201ENST00000579378 TRPM2O94759 1503 aa12.95□□□□□ -0.34
AC011840.3-201ENST00000579378 AFF2P51816 1311 aa12.94□□□□□ -0.34
AC011840.3-201ENST00000579378 IQGAP3Q86VI3 1631 aa12.94□□□□□ -0.34
AC011840.3-201ENST00000579378 LRRC59Q96AG4 307 aaKnown RBP12.93□□□□□ -0.34
AC011840.3-201ENST00000579378 NUP155O75694 1391 aa12.93□□□□□ -0.34
AC011840.3-201ENST00000579378 DCCP43146 1447 aa12.92□□□□□ -0.34
AC011840.3-201ENST00000579378 SETD5Q9C0A6 1442 aa12.92□□□□□ -0.34
AC011840.3-201ENST00000579378 ROCK1Q13464 1354 aa12.92□□□□□ -0.34
AC011840.3-201ENST00000579378 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
AC011840.3-201ENST00000579378 MST1RQ04912 1400 aa12.91□□□□□ -0.34
AC011840.3-201ENST00000579378 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
AC011840.3-201ENST00000579378 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
AC011840.3-201ENST00000579378 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
AC011840.3-201ENST00000579378 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
AC011840.3-201ENST00000579378 ASXL1Q8IXJ9 1541 aa12.9□□□□□ -0.34
AC011840.3-201ENST00000579378 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
AC011840.3-201ENST00000579378 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
AC011840.3-201ENST00000579378 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
AC011840.3-201ENST00000579378 METP08581 1390 aa12.89□□□□□ -0.35
AC011840.3-201ENST00000579378 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
AC011840.3-201ENST00000579378 ITGAEP38570 1179 aa12.88□□□□□ -0.35
AC011840.3-201ENST00000579378 RBM6P78332 1123 aaKnown RBP12.88□□□□□ -0.35
AC011840.3-201ENST00000579378 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
AC011840.3-201ENST00000579378 SPHKAPQ2M3C7 1700 aa12.87□□□□□ -0.35
AC011840.3-201ENST00000579378 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
AC011840.3-201ENST00000579378 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
AC011840.3-201ENST00000579378 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
AC011840.3-201ENST00000579378 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
AC011840.3-201ENST00000579378 RGS12O14924 1447 aa12.84□□□□□ -0.35
AC011840.3-201ENST00000579378 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
AC011840.3-201ENST00000579378 ORAI2Q96SN7 254 aa12.82□□□□□ -0.36
AC011840.3-201ENST00000579378 KIF1BO60333 1816 aa12.82□□□□□ -0.36
AC011840.3-201ENST00000579378 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
AC011840.3-201ENST00000579378 NEXMIFQ5QGS0 1516 aa12.81□□□□□ -0.36
AC011840.3-201ENST00000579378 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
AC011840.3-201ENST00000579378 USP21Q9UK80 565 aa12.8□□□□□ -0.36
AC011840.3-201ENST00000579378 LAMC1P11047 1609 aa12.8□□□□□ -0.36
AC011840.3-201ENST00000579378 CLTCL1P53675 1640 aa12.8□□□□□ -0.36
AC011840.3-201ENST00000579378 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
AC011840.3-201ENST00000579378 PPARGC1BQ86YN6 1023 aaKnown RBP12.79□□□□□ -0.36
AC011840.3-201ENST00000579378 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
AC011840.3-201ENST00000579378 EP400Q96L91 3159 aa12.78□□□□□ -0.36
AC011840.3-201ENST00000579378 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
AC011840.3-201ENST00000579378 ATAD2Q6PL18 1390 aa12.77□□□□□ -0.37
AC011840.3-201ENST00000579378 ROBO2Q9HCK4 1378 aa12.77□□□□□ -0.37
AC011840.3-201ENST00000579378 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
AC011840.3-201ENST00000579378 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
AC011840.3-201ENST00000579378 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
AC011840.3-201ENST00000579378 ATRNO75882 1429 aa12.73□□□□□ -0.37
AC011840.3-201ENST00000579378 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms