RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 SLAIN2Q9P270 581 aa19.51■□□□□ 0.71
CDK5RAP3-212ENST00000579175 TET3O43151 1660 aa19.51■□□□□ 0.71
CDK5RAP3-212ENST00000579175 ROBO1Q9Y6N7 1651 aa19.51■□□□□ 0.71
CDK5RAP3-212ENST00000579175 ADGRB3O60242 1522 aa19.51■□□□□ 0.71
CDK5RAP3-212ENST00000579175 C14orf37Q86TY3 774 aa19.5■□□□□ 0.71
CDK5RAP3-212ENST00000579175 POTEAQ6S8J7 498 aa19.49■□□□□ 0.71
CDK5RAP3-212ENST00000579175 ANKRD50Q9ULJ7 1429 aa19.48■□□□□ 0.71
CDK5RAP3-212ENST00000579175 NKTRP30414 1462 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-212ENST00000579175 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP3-212ENST00000579175 ADGRL2O95490 1459 aa19.46■□□□□ 0.71
CDK5RAP3-212ENST00000579175 RIMS2Q9UQ26 1411 aa19.45■□□□□ 0.7
CDK5RAP3-212ENST00000579175 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
CDK5RAP3-212ENST00000579175 RPRD2Q5VT52 1461 aaKnown RBP19.44■□□□□ 0.7
CDK5RAP3-212ENST00000579175 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDK5RAP3-212ENST00000579175 MYO5BQ9ULV0 1848 aa19.42■□□□□ 0.7
CDK5RAP3-212ENST00000579175 NWD1Q149M9 1564 aa19.42■□□□□ 0.7
CDK5RAP3-212ENST00000579175 TBX22Q9Y458 520 aa19.42■□□□□ 0.7
CDK5RAP3-212ENST00000579175 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
CDK5RAP3-212ENST00000579175 GCC2Q8IWJ2 1684 aa19.41■□□□□ 0.7
CDK5RAP3-212ENST00000579175 JCADQ9P266 1359 aa19.41■□□□□ 0.7
CDK5RAP3-212ENST00000579175 MEX3CQ5U5Q3 659 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-212ENST00000579175 ZFYVE9O95405 1425 aa19.4■□□□□ 0.7
CDK5RAP3-212ENST00000579175 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.7
CDK5RAP3-212ENST00000579175 ATF3P18847 181 aa19.39■□□□□ 0.69
CDK5RAP3-212ENST00000579175 ITGAEP38570 1179 aa19.37■□□□□ 0.69
CDK5RAP3-212ENST00000579175 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
CDK5RAP3-212ENST00000579175 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
CDK5RAP3-212ENST00000579175 C19orf44Q9H6X5 657 aa19.35■□□□□ 0.69
CDK5RAP3-212ENST00000579175 AMOTL2Q9Y2J4 779 aa19.33■□□□□ 0.68
CDK5RAP3-212ENST00000579175 NCOA3Q9Y6Q9 1424 aa19.33■□□□□ 0.68
CDK5RAP3-212ENST00000579175 NUP155O75694 1391 aa19.32■□□□□ 0.68
CDK5RAP3-212ENST00000579175 SPATA31A6Q5VVP1 1343 aa19.31■□□□□ 0.68
CDK5RAP3-212ENST00000579175 E9PCH4 1651 aa19.3■□□□□ 0.68
CDK5RAP3-212ENST00000579175 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-212ENST00000579175 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-212ENST00000579175 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-212ENST00000579175 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-212ENST00000579175 ADAMTS13Q76LX8 1427 aa19.3■□□□□ 0.68
CDK5RAP3-212ENST00000579175 UNC13BO14795 1591 aa19.3■□□□□ 0.68
CDK5RAP3-212ENST00000579175 ZNF326Q5BKZ1 582 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-212ENST00000579175 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
CDK5RAP3-212ENST00000579175 PIK3R4Q99570 1358 aa19.29■□□□□ 0.68
CDK5RAP3-212ENST00000579175 COL16A1Q07092 1604 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-212ENST00000579175 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.28■□□□□ 0.68
CDK5RAP3-212ENST00000579175 DIP2AQ14689 1571 aa19.27■□□□□ 0.68
CDK5RAP3-212ENST00000579175 SETD1AO15047 1707 aaKnown RBP19.27■□□□□ 0.68
CDK5RAP3-212ENST00000579175 ROCK1Q13464 1354 aa19.27■□□□□ 0.68
CDK5RAP3-212ENST00000579175 TRPM2O94759 1503 aa19.26■□□□□ 0.67
CDK5RAP3-212ENST00000579175 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
CDK5RAP3-212ENST00000579175 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
CDK5RAP3-212ENST00000579175 LRP6O75581 1613 aa19.25■□□□□ 0.67
CDK5RAP3-212ENST00000579175 IQGAP3Q86VI3 1631 aa19.24■□□□□ 0.67
CDK5RAP3-212ENST00000579175 RXRBP28702 533 aa19.23■□□□□ 0.67
CDK5RAP3-212ENST00000579175 PTPRUQ92729 1446 aa19.22■□□□□ 0.67
CDK5RAP3-212ENST00000579175 AHDC1Q5TGY3 1603 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP3-212ENST00000579175 UPF1Q92900 1129 aaKnown RBP eCLIP19.19■□□□□ 0.66
CDK5RAP3-212ENST00000579175 SHPRHQ149N8 1683 aa19.18■□□□□ 0.66
CDK5RAP3-212ENST00000579175 LRRC59Q96AG4 307 aaKnown RBP19.17■□□□□ 0.66
CDK5RAP3-212ENST00000579175 AFF2P51816 1311 aa19.16■□□□□ 0.66
CDK5RAP3-212ENST00000579175 DCCP43146 1447 aa19.16■□□□□ 0.66
CDK5RAP3-212ENST00000579175 METP08581 1390 aa19.15■□□□□ 0.66
CDK5RAP3-212ENST00000579175 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
CDK5RAP3-212ENST00000579175 C8orf37Q96NL8 207 aa19.14■□□□□ 0.65
CDK5RAP3-212ENST00000579175 ASXL1Q8IXJ9 1541 aa19.14■□□□□ 0.65
CDK5RAP3-212ENST00000579175 MST1RQ04912 1400 aa19.13■□□□□ 0.65
CDK5RAP3-212ENST00000579175 SPHKAPQ2M3C7 1700 aa19.13■□□□□ 0.65
CDK5RAP3-212ENST00000579175 SETBP1Q9Y6X0 1596 aa19.11■□□□□ 0.65
CDK5RAP3-212ENST00000579175 QTRT2Q9H974 415 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-212ENST00000579175 XRN1Q8IZH2 1706 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP3-212ENST00000579175 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
CDK5RAP3-212ENST00000579175 SETD5Q9C0A6 1442 aa19.1■□□□□ 0.65
CDK5RAP3-212ENST00000579175 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.65
CDK5RAP3-212ENST00000579175 ADAMTS2O95450 1211 aa19.08■□□□□ 0.64
CDK5RAP3-212ENST00000579175 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
CDK5RAP3-212ENST00000579175 VGFO15240 615 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-212ENST00000579175 RBM6P78332 1123 aaKnown RBP19.06■□□□□ 0.64
CDK5RAP3-212ENST00000579175 NHSL1Q5SYE7 1610 aa19.06■□□□□ 0.64
CDK5RAP3-212ENST00000579175 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
CDK5RAP3-212ENST00000579175 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
CDK5RAP3-212ENST00000579175 CLTCL1P53675 1640 aa19.04■□□□□ 0.64
CDK5RAP3-212ENST00000579175 KIF1BO60333 1816 aa19.04■□□□□ 0.64
CDK5RAP3-212ENST00000579175 NEXMIFQ5QGS0 1516 aa19.04■□□□□ 0.64
CDK5RAP3-212ENST00000579175 ORAI2Q96SN7 254 aa19.03■□□□□ 0.64
CDK5RAP3-212ENST00000579175 NALCNQ8IZF0 1738 aa19.02■□□□□ 0.63
CDK5RAP3-212ENST00000579175 C1orf167Q5SNV9 1468 aa19.02■□□□□ 0.63
CDK5RAP3-212ENST00000579175 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
CDK5RAP3-212ENST00000579175 USP21Q9UK80 565 aa18.99■□□□□ 0.63
CDK5RAP3-212ENST00000579175 RGS12O14924 1447 aa18.99■□□□□ 0.63
CDK5RAP3-212ENST00000579175 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
CDK5RAP3-212ENST00000579175 RPGRIP1LQ68CZ1 1315 aa18.98■□□□□ 0.63
CDK5RAP3-212ENST00000579175 ESCO1Q5FWF5 840 aa18.96■□□□□ 0.63
CDK5RAP3-212ENST00000579175 NAIPQ13075 1403 aa18.96■□□□□ 0.63
CDK5RAP3-212ENST00000579175 SOS2Q07890 1332 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-212ENST00000579175 PTCH1Q13635 1447 aa18.95■□□□□ 0.62
CDK5RAP3-212ENST00000579175 TRPC5Q9UL62 973 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP3-212ENST00000579175 STK26Q9P289 416 aa18.92■□□□□ 0.62
CDK5RAP3-212ENST00000579175 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
CDK5RAP3-212ENST00000579175 HFM1A2PYH4 1435 aa18.91■□□□□ 0.62
CDK5RAP3-212ENST00000579175 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
CDK5RAP3-212ENST00000579175 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms