RNA–Protein interactions for RNA: ENST00000578642.1

GPS1-209, Transcript of G protein pathway suppressor 1, humanhuman

TSL 4

Gene GPS1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-209ENST00000578642 ROBO1Q9Y6N7 1651 aa28.54■■■□□ 2.16
GPS1-209ENST00000578642 NKTRP30414 1462 aaKnown RBP28.54■■■□□ 2.16
GPS1-209ENST00000578642 RPRD2Q5VT52 1461 aaKnown RBP28.54■■■□□ 2.16
GPS1-209ENST00000578642 PPP1R15AO75807 674 aaPredicted RBP28.53■■■□□ 2.16
GPS1-209ENST00000578642 NWD1Q149M9 1564 aa28.52■■■□□ 2.16
GPS1-209ENST00000578642 MSH6P52701 1360 aa28.51■■■□□ 2.16
GPS1-209ENST00000578642 MYO5BQ9ULV0 1848 aa28.49■■■□□ 2.15
GPS1-209ENST00000578642 HDGFP51858 240 aaKnown RBP28.48■■■□□ 2.15
GPS1-209ENST00000578642 GCC2Q8IWJ2 1684 aa28.48■■■□□ 2.15
GPS1-209ENST00000578642 ZFYVE9O95405 1425 aa28.47■■■□□ 2.15
GPS1-209ENST00000578642 RIMS2Q9UQ26 1411 aa28.47■■■□□ 2.15
GPS1-209ENST00000578642 PLEKHG1Q9ULL1 1385 aa28.47■■■□□ 2.15
GPS1-209ENST00000578642 CHGAP10645 457 aaKnown RBP28.46■■■□□ 2.15
GPS1-209ENST00000578642 SLAIN2Q9P270 581 aa28.44■■■□□ 2.14
GPS1-209ENST00000578642 TMEM131LA2VDJ0 1609 aa28.43■■■□□ 2.14
GPS1-209ENST00000578642 CHD2O14647 1828 aaKnown RBP28.41■■■□□ 2.14
GPS1-209ENST00000578642 POTEAQ6S8J7 498 aa28.41■■■□□ 2.14
GPS1-209ENST00000578642 UNC13BO14795 1591 aa28.39■■■□□ 2.14
GPS1-209ENST00000578642 PHLPP1O60346 1717 aa28.39■■■□□ 2.14
GPS1-209ENST00000578642 C14orf37Q86TY3 774 aa28.39■■■□□ 2.14
GPS1-209ENST00000578642 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.39■■■□□ 2.14
GPS1-209ENST00000578642 NUTM2DQ5VT03 806 aaPredicted RBP28.38■■■□□ 2.13
GPS1-209ENST00000578642 TBX22Q9Y458 520 aa28.37■■■□□ 2.13
GPS1-209ENST00000578642 E9PCH4 1651 aa28.35■■■□□ 2.13
GPS1-209ENST00000578642 JCADQ9P266 1359 aa28.34■■■□□ 2.13
GPS1-209ENST00000578642 ROCK1Q13464 1354 aa28.3■■■□□ 2.12
GPS1-209ENST00000578642 ADAMTS13Q76LX8 1427 aa28.29■■■□□ 2.12
GPS1-209ENST00000578642 NCOA3Q9Y6Q9 1424 aa28.29■■■□□ 2.12
GPS1-209ENST00000578642 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
GPS1-209ENST00000578642 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
GPS1-209ENST00000578642 NUP155O75694 1391 aa28.27■■■□□ 2.12
GPS1-209ENST00000578642 ATF3P18847 181 aa28.27■■■□□ 2.12
GPS1-209ENST00000578642 ITGAEP38570 1179 aa28.27■■■□□ 2.12
GPS1-209ENST00000578642 COL16A1Q07092 1604 aaPredicted RBP28.26■■■□□ 2.11
GPS1-209ENST00000578642 CADPS2Q86UW7 1296 aa28.26■■■□□ 2.11
GPS1-209ENST00000578642 PIK3R4Q99570 1358 aa28.25■■■□□ 2.11
GPS1-209ENST00000578642 C19orf44Q9H6X5 657 aa28.25■■■□□ 2.11
GPS1-209ENST00000578642 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.23■■■□□ 2.11
GPS1-209ENST00000578642 MEX3CQ5U5Q3 659 aaKnown RBP28.22■■■□□ 2.11
GPS1-209ENST00000578642 TRPM2O94759 1503 aa28.22■■■□□ 2.11
GPS1-209ENST00000578642 AMOTL2Q9Y2J4 779 aa28.21■■■□□ 2.11
GPS1-209ENST00000578642 SPATA31A6Q5VVP1 1343 aa28.19■■■□□ 2.1
GPS1-209ENST00000578642 SETD1AO15047 1707 aaKnown RBP28.19■■■□□ 2.1
GPS1-209ENST00000578642 LRP6O75581 1613 aa28.16■■■□□ 2.1
GPS1-209ENST00000578642 AHDC1Q5TGY3 1603 aaPredicted RBP28.16■■■□□ 2.1
GPS1-209ENST00000578642 PTPRUQ92729 1446 aa28.16■■■□□ 2.1
GPS1-209ENST00000578642 ZNF326Q5BKZ1 582 aaKnown RBP28.14■■■□□ 2.1
GPS1-209ENST00000578642 BRINP3Q76B58 766 aa28.12■■■□□ 2.09
GPS1-209ENST00000578642 PPARGC1BQ86YN6 1023 aaKnown RBP28.12■■■□□ 2.09
GPS1-209ENST00000578642 SHPRHQ149N8 1683 aa28.11■■■□□ 2.09
GPS1-209ENST00000578642 ZNF772Q68DY9 489 aaPredicted RBP28.11■■■□□ 2.09
GPS1-209ENST00000578642 SPHKAPQ2M3C7 1700 aa28.1■■■□□ 2.09
GPS1-209ENST00000578642 NRXN3Q9Y4C0 1643 aa28.08■■■□□ 2.09
GPS1-209ENST00000578642 DCCP43146 1447 aa28.08■■■□□ 2.09
GPS1-209ENST00000578642 SETBP1Q9Y6X0 1596 aa28.07■■■□□ 2.08
GPS1-209ENST00000578642 NUTM2BA6NNL0 878 aaPredicted RBP28.07■■■□□ 2.08
GPS1-209ENST00000578642 NUTM2EB1AL46 878 aaPredicted RBP28.07■■■□□ 2.08
GPS1-209ENST00000578642 NUTM2AQ8IVF1 878 aaPredicted RBP28.07■■■□□ 2.08
GPS1-209ENST00000578642 TRIM52Q96A61 297 aa28.07■■■□□ 2.08
GPS1-209ENST00000578642 XRN1Q8IZH2 1706 aaKnown RBP28.06■■■□□ 2.08
GPS1-209ENST00000578642 ASXL1Q8IXJ9 1541 aa28.04■■■□□ 2.08
GPS1-209ENST00000578642 METP08581 1390 aa28.03■■■□□ 2.08
GPS1-209ENST00000578642 MST1RQ04912 1400 aa28.01■■■□□ 2.07
GPS1-209ENST00000578642 RXRBP28702 533 aa27.98■■■□□ 2.07
GPS1-209ENST00000578642 CLTCL1P53675 1640 aa27.98■■■□□ 2.07
GPS1-209ENST00000578642 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
GPS1-209ENST00000578642 ADGRL3Q9HAR2 1447 aa27.96■■■□□ 2.07
GPS1-209ENST00000578642 LRRC59Q96AG4 307 aaKnown RBP27.95■■■□□ 2.06
GPS1-209ENST00000578642 NEXMIFQ5QGS0 1516 aa27.95■■■□□ 2.06
GPS1-209ENST00000578642 NHSL1Q5SYE7 1610 aa27.95■■■□□ 2.06
GPS1-209ENST00000578642 AFF2P51816 1311 aa27.94■■■□□ 2.06
GPS1-209ENST00000578642 UPF1Q92900 1129 aaKnown RBP eCLIP27.94■■■□□ 2.06
GPS1-209ENST00000578642 DDX17Q92841 729 aaKnown RBP27.93■■■□□ 2.06
GPS1-209ENST00000578642 KIF1BO60333 1816 aa27.92■■■□□ 2.06
GPS1-209ENST00000578642 NALCNQ8IZF0 1738 aa27.91■■■□□ 2.06
GPS1-209ENST00000578642 C8orf37Q96NL8 207 aa27.89■■■□□ 2.06
GPS1-209ENST00000578642 PNPLA6Q8IY17 1366 aa27.86■■■□□ 2.05
GPS1-209ENST00000578642 CDK12Q9NYV4 1490 aaPredicted RBP27.86■■■□□ 2.05
GPS1-209ENST00000578642 NAIPQ13075 1403 aa27.85■■■□□ 2.05
GPS1-209ENST00000578642 VGFO15240 615 aaPredicted RBP27.84■■■□□ 2.05
GPS1-209ENST00000578642 C1orf167Q5SNV9 1468 aa27.83■■■□□ 2.05
GPS1-209ENST00000578642 RRBP1Q9P2E9 1410 aaKnown RBP27.83■■■□□ 2.05
GPS1-209ENST00000578642 PTCH1Q13635 1447 aa27.82■■■□□ 2.04
GPS1-209ENST00000578642 ADAMTS2O95450 1211 aa27.81■■■□□ 2.04
GPS1-209ENST00000578642 QTRT2Q9H974 415 aaKnown RBP27.81■■■□□ 2.04
GPS1-209ENST00000578642 ROBO2Q9HCK4 1378 aa27.8■■■□□ 2.04
GPS1-209ENST00000578642 NGLY1Q96IV0 654 aa27.79■■■□□ 2.04
GPS1-209ENST00000578642 RBM6P78332 1123 aaKnown RBP27.78■■■□□ 2.04
GPS1-209ENST00000578642 ORAI2Q96SN7 254 aa27.77■■■□□ 2.04
GPS1-209ENST00000578642 SLC4A1APQ9BWU0 796 aaKnown RBP27.77■■■□□ 2.04
GPS1-209ENST00000578642 RGS12O14924 1447 aa27.75■■■□□ 2.03
GPS1-209ENST00000578642 RPGRIP1LQ68CZ1 1315 aa27.75■■■□□ 2.03
GPS1-209ENST00000578642 SOS2Q07890 1332 aaPredicted RBP27.72■■■□□ 2.03
GPS1-209ENST00000578642 LAMC1P11047 1609 aa27.72■■■□□ 2.03
GPS1-209ENST00000578642 HFM1A2PYH4 1435 aa27.72■■■□□ 2.03
GPS1-209ENST00000578642 PPLO60437 1756 aa27.7■■■□□ 2.02
GPS1-209ENST00000578642 PRAG1Q86YV5 1406 aa27.69■■■□□ 2.02
GPS1-209ENST00000578642 USP21Q9UK80 565 aa27.68■■■□□ 2.02
GPS1-209ENST00000578642 FOXD1Q16676 465 aa27.65■■■□□ 2.02
GPS1-209ENST00000578642 ESCO1Q5FWF5 840 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms