RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
SMARCD2-207ENST00000578234 UNC13BO14795 1591 aa19.3■□□□□ 0.68
SMARCD2-207ENST00000578234 FAM135BQ49AJ0 1406 aa19.29■□□□□ 0.68
SMARCD2-207ENST00000578234 GCC2Q8IWJ2 1684 aa19.29■□□□□ 0.68
SMARCD2-207ENST00000578234 ZFYVE9O95405 1425 aa19.28■□□□□ 0.68
SMARCD2-207ENST00000578234 CHGAP10645 457 aaKnown RBP19.28■□□□□ 0.68
SMARCD2-207ENST00000578234 PLEKHG1Q9ULL1 1385 aa19.27■□□□□ 0.68
SMARCD2-207ENST00000578234 TMEM131LA2VDJ0 1609 aa19.26■□□□□ 0.67
SMARCD2-207ENST00000578234 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
SMARCD2-207ENST00000578234 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
SMARCD2-207ENST00000578234 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
SMARCD2-207ENST00000578234 MYO5BQ9ULV0 1848 aa19.25■□□□□ 0.67
SMARCD2-207ENST00000578234 NWD1Q149M9 1564 aa19.25■□□□□ 0.67
SMARCD2-207ENST00000578234 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMARCD2-207ENST00000578234 E9PCH4 1651 aa19.24■□□□□ 0.67
SMARCD2-207ENST00000578234 IQGAP3Q86VI3 1631 aa19.23■□□□□ 0.67
SMARCD2-207ENST00000578234 TBX22Q9Y458 520 aa19.23■□□□□ 0.67
SMARCD2-207ENST00000578234 NUP155O75694 1391 aa19.22■□□□□ 0.67
SMARCD2-207ENST00000578234 ITGAEP38570 1179 aa19.22■□□□□ 0.67
SMARCD2-207ENST00000578234 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.67
SMARCD2-207ENST00000578234 C14orf37Q86TY3 774 aa19.21■□□□□ 0.67
SMARCD2-207ENST00000578234 MSH6P52701 1360 aa19.19■□□□□ 0.66
SMARCD2-207ENST00000578234 NUTM2DQ5VT03 806 aaPredicted RBP19.19■□□□□ 0.66
SMARCD2-207ENST00000578234 SLAIN2Q9P270 581 aa19.18■□□□□ 0.66
SMARCD2-207ENST00000578234 ROBO1Q9Y6N7 1651 aa19.17■□□□□ 0.66
SMARCD2-207ENST00000578234 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
SMARCD2-207ENST00000578234 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
SMARCD2-207ENST00000578234 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
SMARCD2-207ENST00000578234 ADAMTS13Q76LX8 1427 aa19.15■□□□□ 0.66
SMARCD2-207ENST00000578234 RGS17Q9UGC6 210 aaPredicted RBP19.14■□□□□ 0.65
SMARCD2-207ENST00000578234 DIP2AQ14689 1571 aa19.13■□□□□ 0.65
SMARCD2-207ENST00000578234 C19orf44Q9H6X5 657 aa19.09■□□□□ 0.65
SMARCD2-207ENST00000578234 AMOTL2Q9Y2J4 779 aa19.08■□□□□ 0.64
SMARCD2-207ENST00000578234 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.64
SMARCD2-207ENST00000578234 TRPM2O94759 1503 aa19.07■□□□□ 0.64
SMARCD2-207ENST00000578234 CADPS2Q86UW7 1296 aa19.07■□□□□ 0.64
SMARCD2-207ENST00000578234 SPHKAPQ2M3C7 1700 aa19.07■□□□□ 0.64
SMARCD2-207ENST00000578234 PHLPP1O60346 1717 aa19.06■□□□□ 0.64
SMARCD2-207ENST00000578234 ATF3P18847 181 aa19.05■□□□□ 0.64
SMARCD2-207ENST00000578234 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
SMARCD2-207ENST00000578234 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
SMARCD2-207ENST00000578234 JCADQ9P266 1359 aa19.05■□□□□ 0.64
SMARCD2-207ENST00000578234 ZNF326Q5BKZ1 582 aaKnown RBP19.04■□□□□ 0.64
SMARCD2-207ENST00000578234 POTEAQ6S8J7 498 aa19.04■□□□□ 0.64
SMARCD2-207ENST00000578234 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
SMARCD2-207ENST00000578234 SETBP1Q9Y6X0 1596 aa19.03■□□□□ 0.64
SMARCD2-207ENST00000578234 NAIPQ13075 1403 aa19.03■□□□□ 0.64
SMARCD2-207ENST00000578234 NRXN3Q9Y4C0 1643 aa19.01■□□□□ 0.63
SMARCD2-207ENST00000578234 COL16A1Q07092 1604 aaPredicted RBP19■□□□□ 0.63
SMARCD2-207ENST00000578234 DCCP43146 1447 aa18.99■□□□□ 0.63
SMARCD2-207ENST00000578234 XRN1Q8IZH2 1706 aaKnown RBP18.98■□□□□ 0.63
SMARCD2-207ENST00000578234 CLTCL1P53675 1640 aa18.98■□□□□ 0.63
SMARCD2-207ENST00000578234 SPATA31A6Q5VVP1 1343 aa18.98■□□□□ 0.63
SMARCD2-207ENST00000578234 METP08581 1390 aa18.97■□□□□ 0.63
SMARCD2-207ENST00000578234 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
SMARCD2-207ENST00000578234 NEXMIFQ5QGS0 1516 aa18.96■□□□□ 0.63
SMARCD2-207ENST00000578234 NUTM2BA6NNL0 878 aaPredicted RBP18.96■□□□□ 0.63
SMARCD2-207ENST00000578234 NUTM2EB1AL46 878 aaPredicted RBP18.96■□□□□ 0.63
SMARCD2-207ENST00000578234 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
SMARCD2-207ENST00000578234 NUTM2AQ8IVF1 878 aaPredicted RBP18.96■□□□□ 0.63
SMARCD2-207ENST00000578234 HFM1A2PYH4 1435 aa18.95■□□□□ 0.62
SMARCD2-207ENST00000578234 KIF1BO60333 1816 aa18.95■□□□□ 0.62
SMARCD2-207ENST00000578234 TRIM52Q96A61 297 aa18.94■□□□□ 0.62
SMARCD2-207ENST00000578234 VGFO15240 615 aaPredicted RBP18.93■□□□□ 0.62
SMARCD2-207ENST00000578234 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
SMARCD2-207ENST00000578234 SHPRHQ149N8 1683 aa18.91■□□□□ 0.62
SMARCD2-207ENST00000578234 MST1RQ04912 1400 aa18.91■□□□□ 0.62
SMARCD2-207ENST00000578234 LRP6O75581 1613 aa18.9■□□□□ 0.62
SMARCD2-207ENST00000578234 RPGRIP1LQ68CZ1 1315 aa18.9■□□□□ 0.62
SMARCD2-207ENST00000578234 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
SMARCD2-207ENST00000578234 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
SMARCD2-207ENST00000578234 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
SMARCD2-207ENST00000578234 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
SMARCD2-207ENST00000578234 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
SMARCD2-207ENST00000578234 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
SMARCD2-207ENST00000578234 NALCNQ8IZF0 1738 aa18.84■□□□□ 0.61
SMARCD2-207ENST00000578234 NHSL1Q5SYE7 1610 aa18.84■□□□□ 0.61
SMARCD2-207ENST00000578234 PTCH1Q13635 1447 aa18.83■□□□□ 0.61
SMARCD2-207ENST00000578234 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.6
SMARCD2-207ENST00000578234 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
SMARCD2-207ENST00000578234 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
SMARCD2-207ENST00000578234 RXRBP28702 533 aa18.81■□□□□ 0.6
SMARCD2-207ENST00000578234 PPLO60437 1756 aa18.81■□□□□ 0.6
SMARCD2-207ENST00000578234 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
SMARCD2-207ENST00000578234 FOXD1Q16676 465 aa18.79■□□□□ 0.6
SMARCD2-207ENST00000578234 C8orf37Q96NL8 207 aa18.78■□□□□ 0.6
SMARCD2-207ENST00000578234 CCDC144AA2RUR9 1427 aa18.77■□□□□ 0.6
SMARCD2-207ENST00000578234 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
SMARCD2-207ENST00000578234 AFF2P51816 1311 aa18.76■□□□□ 0.59
SMARCD2-207ENST00000578234 LAMC1P11047 1609 aa18.76■□□□□ 0.59
SMARCD2-207ENST00000578234 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
SMARCD2-207ENST00000578234 ADAMTS2O95450 1211 aa18.75■□□□□ 0.59
SMARCD2-207ENST00000578234 ORAI2Q96SN7 254 aa18.75■□□□□ 0.59
SMARCD2-207ENST00000578234 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
SMARCD2-207ENST00000578234 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
SMARCD2-207ENST00000578234 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
SMARCD2-207ENST00000578234 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
SMARCD2-207ENST00000578234 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
SMARCD2-207ENST00000578234 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
SMARCD2-207ENST00000578234 NGLY1Q96IV0 654 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms