RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RBM33Q96EV2 1170 aaKnown RBP24.55■■□□□ 1.52
VAPA-204ENST00000577901 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
VAPA-204ENST00000577901 NKTRP30414 1462 aaKnown RBP24.52■■□□□ 1.52
VAPA-204ENST00000577901 NWD1Q149M9 1564 aa24.52■■□□□ 1.52
VAPA-204ENST00000577901 ZFYVE9O95405 1425 aa24.51■■□□□ 1.51
VAPA-204ENST00000577901 PLEKHG1Q9ULL1 1385 aa24.49■■□□□ 1.51
VAPA-204ENST00000577901 PPP1R15AO75807 674 aaPredicted RBP24.48■■□□□ 1.51
VAPA-204ENST00000577901 HDGFP51858 240 aaKnown RBP24.48■■□□□ 1.51
VAPA-204ENST00000577901 RGS17Q9UGC6 210 aaPredicted RBP24.48■■□□□ 1.51
VAPA-204ENST00000577901 RIMS2Q9UQ26 1411 aa24.48■■□□□ 1.51
VAPA-204ENST00000577901 ROBO1Q9Y6N7 1651 aa24.48■■□□□ 1.51
VAPA-204ENST00000577901 UNC13BO14795 1591 aa24.47■■□□□ 1.51
VAPA-204ENST00000577901 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
VAPA-204ENST00000577901 TMEM131LA2VDJ0 1609 aa24.46■■□□□ 1.51
VAPA-204ENST00000577901 MSH6P52701 1360 aa24.46■■□□□ 1.51
VAPA-204ENST00000577901 MYO5BQ9ULV0 1848 aa24.45■■□□□ 1.5
VAPA-204ENST00000577901 CHGAP10645 457 aaKnown RBP24.43■■□□□ 1.5
VAPA-204ENST00000577901 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
VAPA-204ENST00000577901 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.41■■□□□ 1.5
VAPA-204ENST00000577901 SLAIN2Q9P270 581 aa24.41■■□□□ 1.5
VAPA-204ENST00000577901 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
VAPA-204ENST00000577901 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
VAPA-204ENST00000577901 E9PCH4 1651 aa24.4■■□□□ 1.5
VAPA-204ENST00000577901 POTEDQ86YR6 584 aa24.39■■□□□ 1.49
VAPA-204ENST00000577901 IQGAP3Q86VI3 1631 aa24.37■■□□□ 1.49
VAPA-204ENST00000577901 NUTM2DQ5VT03 806 aaPredicted RBP24.37■■□□□ 1.49
VAPA-204ENST00000577901 ADAMTS13Q76LX8 1427 aa24.35■■□□□ 1.49
VAPA-204ENST00000577901 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
VAPA-204ENST00000577901 NUP155O75694 1391 aa24.34■■□□□ 1.49
VAPA-204ENST00000577901 PHLPP1O60346 1717 aa24.33■■□□□ 1.49
VAPA-204ENST00000577901 ITGAEP38570 1179 aa24.33■■□□□ 1.49
VAPA-204ENST00000577901 POTEAQ6S8J7 498 aa24.33■■□□□ 1.49
VAPA-204ENST00000577901 C14orf37Q86TY3 774 aa24.32■■□□□ 1.48
VAPA-204ENST00000577901 DIP2AQ14689 1571 aa24.32■■□□□ 1.48
VAPA-204ENST00000577901 PIK3R4Q99570 1358 aa24.3■■□□□ 1.48
VAPA-204ENST00000577901 JCADQ9P266 1359 aa24.3■■□□□ 1.48
VAPA-204ENST00000577901 C19orf44Q9H6X5 657 aa24.27■■□□□ 1.48
VAPA-204ENST00000577901 ATF3P18847 181 aa24.26■■□□□ 1.47
VAPA-204ENST00000577901 CADPS2Q86UW7 1296 aa24.26■■□□□ 1.47
VAPA-204ENST00000577901 TRPM2O94759 1503 aa24.25■■□□□ 1.47
VAPA-204ENST00000577901 COL16A1Q07092 1604 aaPredicted RBP24.25■■□□□ 1.47
VAPA-204ENST00000577901 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
VAPA-204ENST00000577901 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.24■■□□□ 1.47
VAPA-204ENST00000577901 RRBP1Q9P2E9 1410 aaKnown RBP24.24■■□□□ 1.47
VAPA-204ENST00000577901 PTPRUQ92729 1446 aa24.23■■□□□ 1.47
VAPA-204ENST00000577901 SPATA31A6Q5VVP1 1343 aa24.19■■□□□ 1.46
VAPA-204ENST00000577901 AHDC1Q5TGY3 1603 aaPredicted RBP24.19■■□□□ 1.46
VAPA-204ENST00000577901 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
VAPA-204ENST00000577901 ZNF326Q5BKZ1 582 aaKnown RBP24.18■■□□□ 1.46
VAPA-204ENST00000577901 SETBP1Q9Y6X0 1596 aa24.17■■□□□ 1.46
VAPA-204ENST00000577901 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
VAPA-204ENST00000577901 LRP6O75581 1613 aa24.16■■□□□ 1.46
VAPA-204ENST00000577901 MEX3CQ5U5Q3 659 aaKnown RBP24.15■■□□□ 1.46
VAPA-204ENST00000577901 BRINP3Q76B58 766 aa24.15■■□□□ 1.46
VAPA-204ENST00000577901 DCCP43146 1447 aa24.14■■□□□ 1.45
VAPA-204ENST00000577901 XRN1Q8IZH2 1706 aaKnown RBP24.14■■□□□ 1.45
VAPA-204ENST00000577901 SHPRHQ149N8 1683 aa24.12■■□□□ 1.45
VAPA-204ENST00000577901 METP08581 1390 aa24.12■■□□□ 1.45
VAPA-204ENST00000577901 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
VAPA-204ENST00000577901 ZNF772Q68DY9 489 aaPredicted RBP24.09■■□□□ 1.45
VAPA-204ENST00000577901 CLTCL1P53675 1640 aa24.09■■□□□ 1.45
VAPA-204ENST00000577901 ASXL1Q8IXJ9 1541 aa24.08■■□□□ 1.45
VAPA-204ENST00000577901 MST1RQ04912 1400 aa24.08■■□□□ 1.44
VAPA-204ENST00000577901 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
VAPA-204ENST00000577901 NAIPQ13075 1403 aa24.05■■□□□ 1.44
VAPA-204ENST00000577901 NUTM2BA6NNL0 878 aaPredicted RBP24.04■■□□□ 1.44
VAPA-204ENST00000577901 NUTM2EB1AL46 878 aaPredicted RBP24.04■■□□□ 1.44
VAPA-204ENST00000577901 NUTM2AQ8IVF1 878 aaPredicted RBP24.04■■□□□ 1.44
VAPA-204ENST00000577901 ADGRL3Q9HAR2 1447 aa24.03■■□□□ 1.44
VAPA-204ENST00000577901 SETD5Q9C0A6 1442 aa24.02■■□□□ 1.44
VAPA-204ENST00000577901 TRIM52Q96A61 297 aa24.01■■□□□ 1.43
VAPA-204ENST00000577901 NHSL1Q5SYE7 1610 aa24.01■■□□□ 1.43
VAPA-204ENST00000577901 KIF1BO60333 1816 aa24■■□□□ 1.43
VAPA-204ENST00000577901 LRRC59Q96AG4 307 aaKnown RBP23.99■■□□□ 1.43
VAPA-204ENST00000577901 NALCNQ8IZF0 1738 aa23.98■■□□□ 1.43
VAPA-204ENST00000577901 VGFO15240 615 aaPredicted RBP23.97■■□□□ 1.43
VAPA-204ENST00000577901 RXRBP28702 533 aa23.97■■□□□ 1.43
VAPA-204ENST00000577901 DDX17Q92841 729 aaKnown RBP23.97■■□□□ 1.43
VAPA-204ENST00000577901 AFF2P51816 1311 aa23.95■■□□□ 1.42
VAPA-204ENST00000577901 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
VAPA-204ENST00000577901 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
VAPA-204ENST00000577901 UPF1Q92900 1129 aaKnown RBP eCLIP23.93■■□□□ 1.42
VAPA-204ENST00000577901 C1orf167Q5SNV9 1468 aa23.93■■□□□ 1.42
VAPA-204ENST00000577901 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
VAPA-204ENST00000577901 SLC4A1APQ9BWU0 796 aaKnown RBP23.92■■□□□ 1.42
VAPA-204ENST00000577901 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
VAPA-204ENST00000577901 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
VAPA-204ENST00000577901 CDK12Q9NYV4 1490 aaPredicted RBP23.9■■□□□ 1.42
VAPA-204ENST00000577901 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
VAPA-204ENST00000577901 PRAG1Q86YV5 1406 aa23.88■■□□□ 1.41
VAPA-204ENST00000577901 ORAI2Q96SN7 254 aa23.86■■□□□ 1.41
VAPA-204ENST00000577901 LAMC1P11047 1609 aa23.85■■□□□ 1.41
VAPA-204ENST00000577901 QTRT2Q9H974 415 aaKnown RBP23.84■■□□□ 1.41
VAPA-204ENST00000577901 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
VAPA-204ENST00000577901 PPLO60437 1756 aa23.83■■□□□ 1.41
VAPA-204ENST00000577901 ADAMTS2O95450 1211 aa23.83■■□□□ 1.41
VAPA-204ENST00000577901 RBM6P78332 1123 aaKnown RBP23.82■■□□□ 1.4
VAPA-204ENST00000577901 NGLY1Q96IV0 654 aa23.81■■□□□ 1.4
VAPA-204ENST00000577901 RGS12O14924 1447 aa23.8■■□□□ 1.4
VAPA-204ENST00000577901 MSH5O43196 834 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms