RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 ST18O60284 1047 aa13.56□□□□□ -0.24
RNF43-203ENST00000577716 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
RNF43-203ENST00000577716 SYAP1Q96A49 352 aaPredicted RBP13.56□□□□□ -0.24
RNF43-203ENST00000577716 NRDCO43847 1150 aa13.56□□□□□ -0.24
RNF43-203ENST00000577716 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
RNF43-203ENST00000577716 DRC7Q8IY82 874 aa13.56□□□□□ -0.24
RNF43-203ENST00000577716 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
RNF43-203ENST00000577716 DDX49Q9Y6V7 483 aaKnown RBP13.55□□□□□ -0.24
RNF43-203ENST00000577716 LAMC3Q9Y6N6 1575 aa13.55□□□□□ -0.24
RNF43-203ENST00000577716 GOLGA6L6A8MZA4 724 aa13.55□□□□□ -0.24
RNF43-203ENST00000577716 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
RNF43-203ENST00000577716 DAPK1P53355 1430 aa13.55□□□□□ -0.24
RNF43-203ENST00000577716 SMG6Q86US8 1419 aaKnown RBP13.55□□□□□ -0.24
RNF43-203ENST00000577716 RIPK4P57078 832 aa13.55□□□□□ -0.24
RNF43-203ENST00000577716 HECW1Q76N89 1606 aa13.54□□□□□ -0.24
RNF43-203ENST00000577716 BACH2Q9BYV9 841 aa13.54□□□□□ -0.24
RNF43-203ENST00000577716 FOXD4L5Q5VV16 416 aaPredicted RBP13.54□□□□□ -0.24
RNF43-203ENST00000577716 FOXD4L4Q8WXT5 416 aaPredicted RBP13.54□□□□□ -0.24
RNF43-203ENST00000577716 CHMP5Q9NZZ3 219 aa13.54□□□□□ -0.24
RNF43-203ENST00000577716 DIAPH1O60610 1272 aaKnown RBP13.53□□□□□ -0.24
RNF43-203ENST00000577716 AFAP1Q8N556 730 aa13.53□□□□□ -0.24
RNF43-203ENST00000577716 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
RNF43-203ENST00000577716 CUL7Q14999 1698 aa13.53□□□□□ -0.24
RNF43-203ENST00000577716 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.24
RNF43-203ENST00000577716 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
RNF43-203ENST00000577716 ARID3AQ99856 593 aa13.52□□□□□ -0.25
RNF43-203ENST00000577716 LNPKQ9C0E8 428 aa13.52□□□□□ -0.25
RNF43-203ENST00000577716 AMPHP49418 695 aa13.51□□□□□ -0.25
RNF43-203ENST00000577716 NGDNQ8NEJ9 315 aaKnown RBP13.51□□□□□ -0.25
RNF43-203ENST00000577716 IQGAP2Q13576 1575 aa13.51□□□□□ -0.25
RNF43-203ENST00000577716 MTHFSP49914 203 aa13.51□□□□□ -0.25
RNF43-203ENST00000577716 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
RNF43-203ENST00000577716 C9orf84Q5VXU9 1444 aa13.51□□□□□ -0.25
RNF43-203ENST00000577716 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
RNF43-203ENST00000577716 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
RNF43-203ENST00000577716 MSH5O43196 834 aa13.5□□□□□ -0.25
RNF43-203ENST00000577716 COG3Q96JB2 828 aa13.5□□□□□ -0.25
RNF43-203ENST00000577716 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
RNF43-203ENST00000577716 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
RNF43-203ENST00000577716 TMEM132EQ6IEE7 984 aa13.5□□□□□ -0.25
RNF43-203ENST00000577716 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
RNF43-203ENST00000577716 LTV1Q96GA3 475 aaPredicted RBP13.49□□□□□ -0.25
RNF43-203ENST00000577716 AAMPQ13685 434 aa13.49□□□□□ -0.25
RNF43-203ENST00000577716 BCAR3O75815 825 aa13.48□□□□□ -0.25
RNF43-203ENST00000577716 CDK11BP21127 795 aaKnown RBP13.48□□□□□ -0.25
RNF43-203ENST00000577716 KIF16BQ96L93 1317 aa13.48□□□□□ -0.25
RNF43-203ENST00000577716 RILPL2Q969X0 211 aa13.48□□□□□ -0.25
RNF43-203ENST00000577716 FRAT2O75474 233 aaPredicted RBP13.48□□□□□ -0.25
RNF43-203ENST00000577716 API5Q9BZZ5 524 aaKnown RBP13.47□□□□□ -0.25
RNF43-203ENST00000577716 PTPN23Q9H3S7 1636 aa13.47□□□□□ -0.25
RNF43-203ENST00000577716 PLB1Q6P1J6 1458 aa13.47□□□□□ -0.25
RNF43-203ENST00000577716 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
RNF43-203ENST00000577716 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
RNF43-203ENST00000577716 ARHGAP5Q13017 1502 aa13.46□□□□□ -0.25
RNF43-203ENST00000577716 FOXD4L6Q3SYB3 417 aaPredicted RBP13.46□□□□□ -0.25
RNF43-203ENST00000577716 FOXD4L3Q6VB84 417 aaPredicted RBP13.46□□□□□ -0.25
RNF43-203ENST00000577716 ROCK1Q13464 1354 aa13.46□□□□□ -0.25
RNF43-203ENST00000577716 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
RNF43-203ENST00000577716 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
RNF43-203ENST00000577716 ABCC5O15440 1437 aa13.46□□□□□ -0.25
RNF43-203ENST00000577716 GPATCH3Q96I76 525 aa13.46□□□□□ -0.26
RNF43-203ENST00000577716 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
RNF43-203ENST00000577716 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
RNF43-203ENST00000577716 REC8O95072 547 aa13.45□□□□□ -0.26
RNF43-203ENST00000577716 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
RNF43-203ENST00000577716 MAPKBP1O60336 1514 aa13.44□□□□□ -0.26
RNF43-203ENST00000577716 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
RNF43-203ENST00000577716 HMOX1P09601 288 aa13.44□□□□□ -0.26
RNF43-203ENST00000577716 HSP90AA2PQ14568 343 aaPredicted RBP13.44□□□□□ -0.26
RNF43-203ENST00000577716 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
RNF43-203ENST00000577716 BRPF3Q9ULD4 1205 aa13.43□□□□□ -0.26
RNF43-203ENST00000577716 PHF14O94880 888 aa13.43□□□□□ -0.26
RNF43-203ENST00000577716 GNAI1P63096 354 aa13.43□□□□□ -0.26
RNF43-203ENST00000577716 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
RNF43-203ENST00000577716 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
RNF43-203ENST00000577716 CSPP1Q1MSJ5 1256 aa13.42□□□□□ -0.26
RNF43-203ENST00000577716 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
RNF43-203ENST00000577716 EXOSC9Q06265 439 aaKnown RBP13.42□□□□□ -0.26
RNF43-203ENST00000577716 GNL2Q13823 731 aaKnown RBP13.41□□□□□ -0.26
RNF43-203ENST00000577716 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
RNF43-203ENST00000577716 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
RNF43-203ENST00000577716 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
RNF43-203ENST00000577716 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
RNF43-203ENST00000577716 CYB5RLQ6IPT4 315 aa13.4□□□□□ -0.26
RNF43-203ENST00000577716 CHMP3Q9Y3E7 222 aa13.4□□□□□ -0.26
RNF43-203ENST00000577716 NCOA1Q15788 1441 aa13.4□□□□□ -0.26
RNF43-203ENST00000577716 ERBINQ96RT1 1412 aa13.4□□□□□ -0.26
RNF43-203ENST00000577716 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
RNF43-203ENST00000577716 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
RNF43-203ENST00000577716 SKAP1Q86WV1 359 aa13.39□□□□□ -0.27
RNF43-203ENST00000577716 CAMSAP2Q08AD1 1489 aa13.39□□□□□ -0.27
RNF43-203ENST00000577716 ANO2Q9NQ90 1003 aa13.39□□□□□ -0.27
RNF43-203ENST00000577716 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
RNF43-203ENST00000577716 NUCB2P80303 420 aa13.38□□□□□ -0.27
RNF43-203ENST00000577716 GORABQ5T7V8 394 aa13.38□□□□□ -0.27
RNF43-203ENST00000577716 INTS3Q68E01 1043 aaKnown RBP13.38□□□□□ -0.27
RNF43-203ENST00000577716 TRAK2O60296 914 aa13.38□□□□□ -0.27
RNF43-203ENST00000577716 ATP6V1DQ9Y5K8 247 aa13.37□□□□□ -0.27
RNF43-203ENST00000577716 FKBP5Q13451 457 aaPredicted RBP13.37□□□□□ -0.27
RNF43-203ENST00000577716 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms