RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 PCDHB3Q9Y5E6 796 aa9.53□□□□□ -0.88
TOP2A-203ENST00000577706 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
TOP2A-203ENST00000577706 MLLT3P42568 568 aaPredicted RBP9.49□□□□□ -0.89
TOP2A-203ENST00000577706 ZNF787Q6DD87 383 aa9.49□□□□□ -0.89
TOP2A-203ENST00000577706 BLOC1S3Q6QNY0 202 aa9.49□□□□□ -0.89
TOP2A-203ENST00000577706 DNAJB2P25686 324 aa9.48□□□□□ -0.89
TOP2A-203ENST00000577706 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
TOP2A-203ENST00000577706 SLC19A1P41440 591 aa9.47□□□□□ -0.89
TOP2A-203ENST00000577706 PTGDRQ13258 359 aa9.47□□□□□ -0.89
TOP2A-203ENST00000577706 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
TOP2A-203ENST00000577706 P3H3Q8IVL6 736 aa9.46□□□□□ -0.9
TOP2A-203ENST00000577706 TMEM134Q9H6X4 195 aa9.45□□□□□ -0.9
TOP2A-203ENST00000577706 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
TOP2A-203ENST00000577706 ADGRG1Q9Y653 693 aa9.44□□□□□ -0.9
TOP2A-203ENST00000577706 TLL1O43897 1013 aa9.43□□□□□ -0.9
TOP2A-203ENST00000577706 TRIM67Q6ZTA4 783 aa9.43□□□□□ -0.9
TOP2A-203ENST00000577706 RCCD1A6NED2 376 aa9.42□□□□□ -0.9
TOP2A-203ENST00000577706 ACTN4O43707 911 aaKnown RBP9.42□□□□□ -0.9
TOP2A-203ENST00000577706 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
TOP2A-203ENST00000577706 ANKLE1Q8NAG6 615 aa9.42□□□□□ -0.9
TOP2A-203ENST00000577706 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
TOP2A-203ENST00000577706 NUTM2FA1L443 756 aa9.41□□□□□ -0.9
TOP2A-203ENST00000577706 SEMA3EO15041 775 aa9.41□□□□□ -0.9
TOP2A-203ENST00000577706 ZNF598Q86UK7 904 aaKnown RBP9.41□□□□□ -0.9
TOP2A-203ENST00000577706 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.9
TOP2A-203ENST00000577706 S1PR4O95977 384 aa9.4□□□□□ -0.9
TOP2A-203ENST00000577706 CFHP08603 1231 aa9.4□□□□□ -0.9
TOP2A-203ENST00000577706 PKDCCQ504Y2 493 aa9.4□□□□□ -0.9
TOP2A-203ENST00000577706 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
TOP2A-203ENST00000577706 DGAT1O75907 488 aa9.38□□□□□ -0.91
TOP2A-203ENST00000577706 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
TOP2A-203ENST00000577706 NR1I2O75469 434 aa9.37□□□□□ -0.91
TOP2A-203ENST00000577706 PRR20EP86478 221 aa9.37□□□□□ -0.91
TOP2A-203ENST00000577706 PRR20CP86479 221 aa9.37□□□□□ -0.91
TOP2A-203ENST00000577706 PRR20DP86480 221 aa9.37□□□□□ -0.91
TOP2A-203ENST00000577706 PRR20BP86481 221 aa9.37□□□□□ -0.91
TOP2A-203ENST00000577706 PRR20AP86496 221 aa9.37□□□□□ -0.91
TOP2A-203ENST00000577706 LIAT1Q6ZQX7 453 aa9.37□□□□□ -0.91
TOP2A-203ENST00000577706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.36□□□□□ -0.91
TOP2A-203ENST00000577706 FCHSD2O94868 740 aa9.36□□□□□ -0.91
TOP2A-203ENST00000577706 ADH1BP00325 375 aa9.36□□□□□ -0.91
TOP2A-203ENST00000577706 SLC10A3P09131 477 aa9.36□□□□□ -0.91
TOP2A-203ENST00000577706 MYT1Q01538 1121 aa9.36□□□□□ -0.91
TOP2A-203ENST00000577706 ZNF697Q5TEC3 545 aa9.36□□□□□ -0.91
TOP2A-203ENST00000577706 SLC6A16Q9GZN6 736 aa9.34□□□□□ -0.91
TOP2A-203ENST00000577706 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
TOP2A-203ENST00000577706 TNFRSF10AO00220 468 aa9.32□□□□□ -0.92
TOP2A-203ENST00000577706 GDF9O60383 454 aa9.32□□□□□ -0.92
TOP2A-203ENST00000577706 OATP04181 439 aa9.32□□□□□ -0.92
TOP2A-203ENST00000577706 RSPH4AQ5TD94 716 aa9.32□□□□□ -0.92
TOP2A-203ENST00000577706 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
TOP2A-203ENST00000577706 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
TOP2A-203ENST00000577706 PXYLP1Q8TE99 480 aa9.31□□□□□ -0.92
TOP2A-203ENST00000577706 PLA2G2CQ5R387 149 aa9.3□□□□□ -0.92
TOP2A-203ENST00000577706 PUS10Q3MIT2 529 aaKnown RBP9.29□□□□□ -0.92
TOP2A-203ENST00000577706 POTECB2RU33 542 aa9.28□□□□□ -0.92
TOP2A-203ENST00000577706 SPSB2Q99619 263 aa9.28□□□□□ -0.92
TOP2A-203ENST00000577706 HIC1Q14526 733 aa9.27□□□□□ -0.93
TOP2A-203ENST00000577706 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
TOP2A-203ENST00000577706 METTL3Q86U44 580 aaKnown RBP9.26□□□□□ -0.93
TOP2A-203ENST00000577706 LMOD2Q6P5Q4 547 aa9.25□□□□□ -0.93
TOP2A-203ENST00000577706 FOXC1Q12948 553 aa9.24□□□□□ -0.93
TOP2A-203ENST00000577706 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
TOP2A-203ENST00000577706 AAASQ9NRG9 546 aa9.23□□□□□ -0.93
TOP2A-203ENST00000577706 PKD2L1Q9P0L9 805 aa9.23□□□□□ -0.93
TOP2A-203ENST00000577706 ST8SIA5O15466 376 aa9.22□□□□□ -0.93
TOP2A-203ENST00000577706 RDH13Q8NBN7 331 aa9.22□□□□□ -0.93
TOP2A-203ENST00000577706 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
TOP2A-203ENST00000577706 SLC24A1O60721 1099 aa9.21□□□□□ -0.94
TOP2A-203ENST00000577706 RPIAP49247 311 aa9.21□□□□□ -0.94
TOP2A-203ENST00000577706 MORN1Q5T089 497 aa9.21□□□□□ -0.94
TOP2A-203ENST00000577706 GNPATO15228 680 aa9.2□□□□□ -0.94
TOP2A-203ENST00000577706 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
TOP2A-203ENST00000577706 DDX11L8A8MPP1 907 aa9.19□□□□□ -0.94
TOP2A-203ENST00000577706 FECHP22830 423 aa9.19□□□□□ -0.94
TOP2A-203ENST00000577706 ATP6V1AP38606 617 aa9.19□□□□□ -0.94
TOP2A-203ENST00000577706 FUT2Q10981 343 aa9.19□□□□□ -0.94
TOP2A-203ENST00000577706 FCF1Q9Y324 198 aaKnown RBP9.19□□□□□ -0.94
TOP2A-203ENST00000577706 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
TOP2A-203ENST00000577706 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
TOP2A-203ENST00000577706 THAP11Q96EK4 314 aa9.18□□□□□ -0.94
TOP2A-203ENST00000577706 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
TOP2A-203ENST00000577706 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
TOP2A-203ENST00000577706 FAM160A2Q8N612 972 aaPredicted RBP9.16□□□□□ -0.94
TOP2A-203ENST00000577706 TOR4AQ9NXH8 423 aa9.16□□□□□ -0.94
TOP2A-203ENST00000577706 SLC27A5Q9Y2P5 690 aa9.16□□□□□ -0.94
TOP2A-203ENST00000577706 SULF1Q8IWU6 871 aa9.15□□□□□ -0.94
TOP2A-203ENST00000577706 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
TOP2A-203ENST00000577706 GPR37O15354 613 aa9.14□□□□□ -0.95
TOP2A-203ENST00000577706 AVPP01185 164 aa9.14□□□□□ -0.95
TOP2A-203ENST00000577706 GCGRP47871 477 aa9.14□□□□□ -0.95
TOP2A-203ENST00000577706 NLRP7Q8WX94 980 aa9.14□□□□□ -0.95
TOP2A-203ENST00000577706 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
TOP2A-203ENST00000577706 ZBTB24O43167 697 aaPredicted RBP9.13□□□□□ -0.95
TOP2A-203ENST00000577706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
TOP2A-203ENST00000577706 AXIN1O15169 862 aa9.12□□□□□ -0.95
TOP2A-203ENST00000577706 CTC1Q2NKJ3 1217 aa9.12□□□□□ -0.95
TOP2A-203ENST00000577706 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
TOP2A-203ENST00000577706 BRICD5Q6PL45 260 aa9.12□□□□□ -0.95
TOP2A-203ENST00000577706 GPIHBP1Q8IV16 184 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms