RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
CALCOCO2-228ENST00000576582 ROBO1Q9Y6N7 1651 aa16.67■□□□□ 0.26
CALCOCO2-228ENST00000576582 ADGRL2O95490 1459 aa16.66■□□□□ 0.26
CALCOCO2-228ENST00000576582 JCADQ9P266 1359 aa16.65■□□□□ 0.26
CALCOCO2-228ENST00000576582 TBX22Q9Y458 520 aa16.65■□□□□ 0.26
CALCOCO2-228ENST00000576582 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
CALCOCO2-228ENST00000576582 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
CALCOCO2-228ENST00000576582 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
CALCOCO2-228ENST00000576582 NWD1Q149M9 1564 aa16.64■□□□□ 0.25
CALCOCO2-228ENST00000576582 PLEKHG1Q9ULL1 1385 aa16.64■□□□□ 0.25
CALCOCO2-228ENST00000576582 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
CALCOCO2-228ENST00000576582 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.62■□□□□ 0.25
CALCOCO2-228ENST00000576582 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
CALCOCO2-228ENST00000576582 SPATA31A6Q5VVP1 1343 aa16.6■□□□□ 0.25
CALCOCO2-228ENST00000576582 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
CALCOCO2-228ENST00000576582 RIMS2Q9UQ26 1411 aa16.6■□□□□ 0.25
CALCOCO2-228ENST00000576582 CADPS2Q86UW7 1296 aa16.59■□□□□ 0.25
CALCOCO2-228ENST00000576582 C19orf44Q9H6X5 657 aa16.59■□□□□ 0.25
CALCOCO2-228ENST00000576582 C14orf37Q86TY3 774 aa16.58■□□□□ 0.24
CALCOCO2-228ENST00000576582 PHLPP1O60346 1717 aa16.57■□□□□ 0.24
CALCOCO2-228ENST00000576582 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
CALCOCO2-228ENST00000576582 ZNF772Q68DY9 489 aaPredicted RBP16.57■□□□□ 0.24
CALCOCO2-228ENST00000576582 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
CALCOCO2-228ENST00000576582 PIK3R4Q99570 1358 aa16.56■□□□□ 0.24
CALCOCO2-228ENST00000576582 ATF3P18847 181 aa16.56■□□□□ 0.24
CALCOCO2-228ENST00000576582 CHGAP10645 457 aaKnown RBP16.55■□□□□ 0.24
CALCOCO2-228ENST00000576582 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
CALCOCO2-228ENST00000576582 TMEM131LA2VDJ0 1609 aa16.53■□□□□ 0.24
CALCOCO2-228ENST00000576582 ADAMTS13Q76LX8 1427 aa16.52■□□□□ 0.23
CALCOCO2-228ENST00000576582 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.23
CALCOCO2-228ENST00000576582 UNC13BO14795 1591 aa16.51■□□□□ 0.23
CALCOCO2-228ENST00000576582 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
CALCOCO2-228ENST00000576582 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
CALCOCO2-228ENST00000576582 DIP2AQ14689 1571 aa16.49■□□□□ 0.23
CALCOCO2-228ENST00000576582 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO2-228ENST00000576582 UPF1Q92900 1129 aaKnown RBP eCLIP16.49■□□□□ 0.23
CALCOCO2-228ENST00000576582 MYO5BQ9ULV0 1848 aa16.48■□□□□ 0.23
CALCOCO2-228ENST00000576582 RXRBP28702 533 aa16.48■□□□□ 0.23
CALCOCO2-228ENST00000576582 LRP6O75581 1613 aa16.48■□□□□ 0.23
CALCOCO2-228ENST00000576582 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO2-228ENST00000576582 BRINP3Q76B58 766 aa16.47■□□□□ 0.23
CALCOCO2-228ENST00000576582 ROCK1Q13464 1354 aa16.47■□□□□ 0.23
CALCOCO2-228ENST00000576582 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.46■□□□□ 0.23
CALCOCO2-228ENST00000576582 TRIM52Q96A61 297 aa16.46■□□□□ 0.23
CALCOCO2-228ENST00000576582 DCCP43146 1447 aa16.45■□□□□ 0.22
CALCOCO2-228ENST00000576582 SETD1AO15047 1707 aaKnown RBP16.44■□□□□ 0.22
CALCOCO2-228ENST00000576582 IQGAP3Q86VI3 1631 aa16.44■□□□□ 0.22
CALCOCO2-228ENST00000576582 TRPM2O94759 1503 aa16.44■□□□□ 0.22
CALCOCO2-228ENST00000576582 E9PCH4 1651 aa16.43■□□□□ 0.22
CALCOCO2-228ENST00000576582 SHPRHQ149N8 1683 aa16.43■□□□□ 0.22
CALCOCO2-228ENST00000576582 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO2-228ENST00000576582 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO2-228ENST00000576582 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO2-228ENST00000576582 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
CALCOCO2-228ENST00000576582 NUP155O75694 1391 aa16.42■□□□□ 0.22
CALCOCO2-228ENST00000576582 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO2-228ENST00000576582 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
CALCOCO2-228ENST00000576582 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
CALCOCO2-228ENST00000576582 AFF2P51816 1311 aa16.39■□□□□ 0.21
CALCOCO2-228ENST00000576582 ZNF326Q5BKZ1 582 aaKnown RBP16.37■□□□□ 0.21
CALCOCO2-228ENST00000576582 MST1RQ04912 1400 aa16.36■□□□□ 0.21
CALCOCO2-228ENST00000576582 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
CALCOCO2-228ENST00000576582 RBM6P78332 1123 aaKnown RBP16.36■□□□□ 0.21
CALCOCO2-228ENST00000576582 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
CALCOCO2-228ENST00000576582 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
CALCOCO2-228ENST00000576582 METP08581 1390 aa16.35■□□□□ 0.21
CALCOCO2-228ENST00000576582 C8orf37Q96NL8 207 aa16.33■□□□□ 0.2
CALCOCO2-228ENST00000576582 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.2
CALCOCO2-228ENST00000576582 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
CALCOCO2-228ENST00000576582 ADGRL3Q9HAR2 1447 aa16.32■□□□□ 0.2
CALCOCO2-228ENST00000576582 NRXN3Q9Y4C0 1643 aa16.31■□□□□ 0.2
CALCOCO2-228ENST00000576582 PNPLA6Q8IY17 1366 aa16.31■□□□□ 0.2
CALCOCO2-228ENST00000576582 ITGAEP38570 1179 aa16.31■□□□□ 0.2
CALCOCO2-228ENST00000576582 NHSL1Q5SYE7 1610 aa16.3■□□□□ 0.2
CALCOCO2-228ENST00000576582 SPHKAPQ2M3C7 1700 aa16.3■□□□□ 0.2
CALCOCO2-228ENST00000576582 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
CALCOCO2-228ENST00000576582 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
CALCOCO2-228ENST00000576582 C1orf167Q5SNV9 1468 aa16.27■□□□□ 0.19
CALCOCO2-228ENST00000576582 RGS12O14924 1447 aa16.27■□□□□ 0.19
CALCOCO2-228ENST00000576582 SOS2Q07890 1332 aaPredicted RBP16.26■□□□□ 0.19
CALCOCO2-228ENST00000576582 ADAMTS2O95450 1211 aa16.26■□□□□ 0.19
CALCOCO2-228ENST00000576582 FOXD1Q16676 465 aa16.26■□□□□ 0.19
CALCOCO2-228ENST00000576582 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
CALCOCO2-228ENST00000576582 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
CALCOCO2-228ENST00000576582 USP21Q9UK80 565 aa16.24■□□□□ 0.19
CALCOCO2-228ENST00000576582 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
CALCOCO2-228ENST00000576582 RPGRIP1LQ68CZ1 1315 aa16.23■□□□□ 0.19
CALCOCO2-228ENST00000576582 PTCH1Q13635 1447 aa16.23■□□□□ 0.19
CALCOCO2-228ENST00000576582 ORAI2Q96SN7 254 aa16.23■□□□□ 0.19
CALCOCO2-228ENST00000576582 NEXMIFQ5QGS0 1516 aa16.23■□□□□ 0.19
CALCOCO2-228ENST00000576582 CLTCL1P53675 1640 aa16.22■□□□□ 0.19
CALCOCO2-228ENST00000576582 RRBP1Q9P2E9 1410 aaKnown RBP16.21■□□□□ 0.19
CALCOCO2-228ENST00000576582 LAMC1P11047 1609 aa16.21■□□□□ 0.19
CALCOCO2-228ENST00000576582 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.18
CALCOCO2-228ENST00000576582 CCDC125Q86Z20 511 aa16.2■□□□□ 0.18
CALCOCO2-228ENST00000576582 ROBO2Q9HCK4 1378 aa16.2■□□□□ 0.18
CALCOCO2-228ENST00000576582 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
CALCOCO2-228ENST00000576582 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
CALCOCO2-228ENST00000576582 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
CALCOCO2-228ENST00000576582 NAIPQ13075 1403 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms