RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 RBM33Q96EV2 1170 aaKnown RBP20.34■□□□□ 0.85
TSR1-205ENST00000576202 BCANQ96GW7 911 aa20.32■□□□□ 0.84
TSR1-205ENST00000576202 ANKRD50Q9ULJ7 1429 aa20.32■□□□□ 0.84
TSR1-205ENST00000576202 ZFYVE9O95405 1425 aa20.3■□□□□ 0.84
TSR1-205ENST00000576202 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
TSR1-205ENST00000576202 MSH6P52701 1360 aa20.3■□□□□ 0.84
TSR1-205ENST00000576202 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
TSR1-205ENST00000576202 PLEKHG1Q9ULL1 1385 aa20.29■□□□□ 0.84
TSR1-205ENST00000576202 MYO5BQ9ULV0 1848 aa20.29■□□□□ 0.84
TSR1-205ENST00000576202 CHD2O14647 1828 aaKnown RBP20.27■□□□□ 0.84
TSR1-205ENST00000576202 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.83
TSR1-205ENST00000576202 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.83
TSR1-205ENST00000576202 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
TSR1-205ENST00000576202 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
TSR1-205ENST00000576202 POTEAQ6S8J7 498 aa20.25■□□□□ 0.83
TSR1-205ENST00000576202 SLAIN2Q9P270 581 aa20.25■□□□□ 0.83
TSR1-205ENST00000576202 UNC13BO14795 1591 aa20.25■□□□□ 0.83
TSR1-205ENST00000576202 PHLPP1O60346 1717 aa20.24■□□□□ 0.83
TSR1-205ENST00000576202 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
TSR1-205ENST00000576202 JCADQ9P266 1359 aa20.21■□□□□ 0.83
TSR1-205ENST00000576202 NCOA3Q9Y6Q9 1424 aa20.2■□□□□ 0.82
TSR1-205ENST00000576202 E9PCH4 1651 aa20.2■□□□□ 0.82
TSR1-205ENST00000576202 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.2■□□□□ 0.82
TSR1-205ENST00000576202 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
TSR1-205ENST00000576202 COL16A1Q07092 1604 aaPredicted RBP20.18■□□□□ 0.82
TSR1-205ENST00000576202 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
TSR1-205ENST00000576202 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
TSR1-205ENST00000576202 IQGAP3Q86VI3 1631 aa20.16■□□□□ 0.82
TSR1-205ENST00000576202 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
TSR1-205ENST00000576202 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
TSR1-205ENST00000576202 PIK3R4Q99570 1358 aa20.15■□□□□ 0.82
TSR1-205ENST00000576202 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.81
TSR1-205ENST00000576202 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
TSR1-205ENST00000576202 CADPS2Q86UW7 1296 aa20.12■□□□□ 0.81
TSR1-205ENST00000576202 TRPM2O94759 1503 aa20.12■□□□□ 0.81
TSR1-205ENST00000576202 SETD1AO15047 1707 aaKnown RBP20.11■□□□□ 0.81
TSR1-205ENST00000576202 C19orf44Q9H6X5 657 aa20.11■□□□□ 0.81
TSR1-205ENST00000576202 AHDC1Q5TGY3 1603 aaPredicted RBP20.11■□□□□ 0.81
TSR1-205ENST00000576202 SPATA31A6Q5VVP1 1343 aa20.1■□□□□ 0.81
TSR1-205ENST00000576202 ATF3P18847 181 aa20.1■□□□□ 0.81
TSR1-205ENST00000576202 LRP6O75581 1613 aa20.09■□□□□ 0.81
TSR1-205ENST00000576202 NUP155O75694 1391 aa20.08■□□□□ 0.81
TSR1-205ENST00000576202 SHPRHQ149N8 1683 aa20.08■□□□□ 0.81
TSR1-205ENST00000576202 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
TSR1-205ENST00000576202 PTPRUQ92729 1446 aa20.06■□□□□ 0.8
TSR1-205ENST00000576202 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
TSR1-205ENST00000576202 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
TSR1-205ENST00000576202 DCCP43146 1447 aa20.03■□□□□ 0.8
TSR1-205ENST00000576202 XRN1Q8IZH2 1706 aaKnown RBP20.03■□□□□ 0.8
TSR1-205ENST00000576202 ZNF772Q68DY9 489 aaPredicted RBP20.03■□□□□ 0.8
TSR1-205ENST00000576202 SETBP1Q9Y6X0 1596 aa20.03■□□□□ 0.8
TSR1-205ENST00000576202 SPHKAPQ2M3C7 1700 aa20.02■□□□□ 0.8
TSR1-205ENST00000576202 ITGAEP38570 1179 aa20.02■□□□□ 0.8
TSR1-205ENST00000576202 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
TSR1-205ENST00000576202 ASXL1Q8IXJ9 1541 aa19.99■□□□□ 0.79
TSR1-205ENST00000576202 MST1RQ04912 1400 aa19.97■□□□□ 0.79
TSR1-205ENST00000576202 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
TSR1-205ENST00000576202 NHSL1Q5SYE7 1610 aa19.96■□□□□ 0.79
TSR1-205ENST00000576202 TRIM52Q96A61 297 aa19.96■□□□□ 0.79
TSR1-205ENST00000576202 METP08581 1390 aa19.95■□□□□ 0.79
TSR1-205ENST00000576202 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
TSR1-205ENST00000576202 NUTM2BA6NNL0 878 aaPredicted RBP19.95■□□□□ 0.78
TSR1-205ENST00000576202 NUTM2EB1AL46 878 aaPredicted RBP19.95■□□□□ 0.78
TSR1-205ENST00000576202 NUTM2AQ8IVF1 878 aaPredicted RBP19.95■□□□□ 0.78
TSR1-205ENST00000576202 NEXMIFQ5QGS0 1516 aa19.93■□□□□ 0.78
TSR1-205ENST00000576202 RXRBP28702 533 aa19.93■□□□□ 0.78
TSR1-205ENST00000576202 UPF1Q92900 1129 aaKnown RBP eCLIP19.93■□□□□ 0.78
TSR1-205ENST00000576202 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
TSR1-205ENST00000576202 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
TSR1-205ENST00000576202 NALCNQ8IZF0 1738 aa19.91■□□□□ 0.78
TSR1-205ENST00000576202 LRRC59Q96AG4 307 aaKnown RBP19.91■□□□□ 0.78
TSR1-205ENST00000576202 CDK12Q9NYV4 1490 aaPredicted RBP19.91■□□□□ 0.78
TSR1-205ENST00000576202 AFF2P51816 1311 aa19.9■□□□□ 0.78
TSR1-205ENST00000576202 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
TSR1-205ENST00000576202 KIF1BO60333 1816 aa19.88■□□□□ 0.77
TSR1-205ENST00000576202 PNPLA6Q8IY17 1366 aa19.86■□□□□ 0.77
TSR1-205ENST00000576202 DDX17Q92841 729 aaKnown RBP19.85■□□□□ 0.77
TSR1-205ENST00000576202 C1orf167Q5SNV9 1468 aa19.84■□□□□ 0.77
TSR1-205ENST00000576202 PTCH1Q13635 1447 aa19.84■□□□□ 0.77
TSR1-205ENST00000576202 C8orf37Q96NL8 207 aa19.83■□□□□ 0.77
TSR1-205ENST00000576202 LAMC1P11047 1609 aa19.82■□□□□ 0.76
TSR1-205ENST00000576202 NAIPQ13075 1403 aa19.82■□□□□ 0.76
TSR1-205ENST00000576202 RGS12O14924 1447 aa19.8■□□□□ 0.76
TSR1-205ENST00000576202 RRBP1Q9P2E9 1410 aaKnown RBP19.8■□□□□ 0.76
TSR1-205ENST00000576202 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
TSR1-205ENST00000576202 QTRT2Q9H974 415 aaKnown RBP19.8■□□□□ 0.76
TSR1-205ENST00000576202 RBM6P78332 1123 aaKnown RBP19.79■□□□□ 0.76
TSR1-205ENST00000576202 ROBO2Q9HCK4 1378 aa19.79■□□□□ 0.76
TSR1-205ENST00000576202 PRAG1Q86YV5 1406 aa19.78■□□□□ 0.76
TSR1-205ENST00000576202 ADAMTS2O95450 1211 aa19.76■□□□□ 0.75
TSR1-205ENST00000576202 NGLY1Q96IV0 654 aa19.76■□□□□ 0.75
TSR1-205ENST00000576202 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
TSR1-205ENST00000576202 SOS2Q07890 1332 aaPredicted RBP19.76■□□□□ 0.75
TSR1-205ENST00000576202 RPGRIP1LQ68CZ1 1315 aa19.76■□□□□ 0.75
TSR1-205ENST00000576202 PPLO60437 1756 aa19.75■□□□□ 0.75
TSR1-205ENST00000576202 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
TSR1-205ENST00000576202 COL22A1Q8NFW1 1626 aaPredicted RBP19.72■□□□□ 0.75
TSR1-205ENST00000576202 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
TSR1-205ENST00000576202 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
TSR1-205ENST00000576202 USP21Q9UK80 565 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms